BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006657
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [...   378   e-102
ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90...   367   2e-99
ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|1...   367   3e-99
gb|AFK33945.1| unknown [Lotus japonicus]                              353   6e-95

>ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
            gi|298204604|emb|CBI23879.3| unnamed protein product
            [Vitis vinifera]
          Length = 229

 Score =  378 bits (971), Expect = e-102
 Identities = 186/220 (84%), Positives = 207/220 (94%)
 Frame = -2

Query: 1004 RNRPITLSKTKKKGREHKEVIVNSIREAVDNYNSIYVFSYENMRNLKFKEFREQLKSTSR 825
            R+RP+TLSKTKKKGR HKE IVNSIR+AV+NY+SIYVFS+ENMRNLKFKEFRE+LKSTSR
Sbjct: 6    RDRPVTLSKTKKKGRGHKESIVNSIRQAVENYSSIYVFSFENMRNLKFKEFREKLKSTSR 65

Query: 824  FFLGSNKVMQISLGRKVDDEIRPGIYKVSKLLLGNSGLFFTNLAKEEVIRLFEEYEEHDF 645
            FFLGSNKVMQI++GR V DEIRPG+ KVSKLL G++GLFFTNL KEEV RLF EYEE+DF
Sbjct: 66   FFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGDTGLFFTNLPKEEVQRLFNEYEEYDF 125

Query: 644  ARTGSTATEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDYVVCEEGAALSP 465
            ARTGSTA EKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSD+VVCEEG  LSP
Sbjct: 126  ARTGSTAVEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGTPLSP 185

Query: 464  ESARILRLLGMQMATFRLHLICRWSPEDFELYKEGLEFSD 345
            ESARILRLLG++MATFRLHL+CRWSP++F+LYKEGL+ SD
Sbjct: 186  ESARILRLLGIKMATFRLHLVCRWSPDEFDLYKEGLDDSD 225


>ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|222860140|gb|EEE97687.1|
            predicted protein [Populus trichocarpa]
          Length = 229

 Score =  374 bits (960), Expect = e-101
 Identities = 183/220 (83%), Positives = 204/220 (92%)
 Frame = -2

Query: 1004 RNRPITLSKTKKKGREHKEVIVNSIREAVDNYNSIYVFSYENMRNLKFKEFREQLKSTSR 825
            RNRP+TLSKTKKKGREHKE IVNSIR+AV+ YNSIYVFS+ENMRNLKFKEFREQ K TSR
Sbjct: 6    RNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQHKLTSR 65

Query: 824  FFLGSNKVMQISLGRKVDDEIRPGIYKVSKLLLGNSGLFFTNLAKEEVIRLFEEYEEHDF 645
            FFLGSNKVMQ+SLGR   DEIRPG++KVSKLL G+SGLF TNL++EEV RLF EYEE+DF
Sbjct: 66   FFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDSGLFLTNLSREEVERLFNEYEEYDF 125

Query: 644  ARTGSTATEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDYVVCEEGAALSP 465
            ARTG+TATE VELKEGPL+QFTHEMEPFLRKQGMPVRLNKGV++LVS++VVCEEG  LSP
Sbjct: 126  ARTGTTATEMVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIDLVSNFVVCEEGKPLSP 185

Query: 464  ESARILRLLGMQMATFRLHLICRWSPEDFELYKEGLEFSD 345
            ES+RILRLLG +MATFRLHLICRWSPEDFELY+EGL+ SD
Sbjct: 186  ESSRILRLLGTKMATFRLHLICRWSPEDFELYREGLDESD 225


>gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative
            ribosomal protein L1 [Solanum tuberosum]
          Length = 229

 Score =  367 bits (943), Expect = 2e-99
 Identities = 178/220 (80%), Positives = 203/220 (92%)
 Frame = -2

Query: 1004 RNRPITLSKTKKKGREHKEVIVNSIREAVDNYNSIYVFSYENMRNLKFKEFREQLKSTSR 825
            RNR +TLSKTKKKG+EHKE IVNSIRE  + Y+S YVFS+ENMRNLKFKEFR+QLKS+SR
Sbjct: 6    RNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQLKSSSR 65

Query: 824  FFLGSNKVMQISLGRKVDDEIRPGIYKVSKLLLGNSGLFFTNLAKEEVIRLFEEYEEHDF 645
            FFLGSNKVMQ++LGR   DEIRPG++K+SKL+ G+SGL FTNL+KEEV RLF EYEEHDF
Sbjct: 66   FFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGDSGLCFTNLSKEEVQRLFNEYEEHDF 125

Query: 644  ARTGSTATEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDYVVCEEGAALSP 465
            ARTG+TATEKVEL+EGPLDQFTHEMEPFLRKQGMPVRLN+GVVELVSD+VVCEEG  LSP
Sbjct: 126  ARTGTTATEKVELQEGPLDQFTHEMEPFLRKQGMPVRLNRGVVELVSDFVVCEEGRPLSP 185

Query: 464  ESARILRLLGMQMATFRLHLICRWSPEDFELYKEGLEFSD 345
            E+ARILRLLG +MATFRLHLICRWSP++FE+Y+EGLE SD
Sbjct: 186  EAARILRLLGKKMATFRLHLICRWSPDEFEIYREGLEESD 225


>ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|118486150|gb|ABK94918.1|
            unknown [Populus trichocarpa] gi|222846270|gb|EEE83817.1|
            predicted protein [Populus trichocarpa]
          Length = 229

 Score =  367 bits (942), Expect = 3e-99
 Identities = 181/220 (82%), Positives = 200/220 (90%)
 Frame = -2

Query: 1004 RNRPITLSKTKKKGREHKEVIVNSIREAVDNYNSIYVFSYENMRNLKFKEFREQLKSTSR 825
            RNRP+TLSKTKKKGREHKE IVNSIR+AV+ YNSIYVFS+ENMRNLKFKEFREQ K TSR
Sbjct: 6    RNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQHKLTSR 65

Query: 824  FFLGSNKVMQISLGRKVDDEIRPGIYKVSKLLLGNSGLFFTNLAKEEVIRLFEEYEEHDF 645
            FFLGSNKVMQ+SLGR   DEIRPG++KVSKLL G++GLF TNL +EEV RLF EYEE+DF
Sbjct: 66   FFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDAGLFLTNLPREEVERLFNEYEEYDF 125

Query: 644  ARTGSTATEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDYVVCEEGAALSP 465
            ARTG+TATE VELKEGPL+QFTHEMEPFLRKQGMPVRLNKGV+ELVSD+VV EEG  LSP
Sbjct: 126  ARTGTTATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIELVSDFVVSEEGKPLSP 185

Query: 464  ESARILRLLGMQMATFRLHLICRWSPEDFELYKEGLEFSD 345
            E ARILRLLG + ATF+LHLICRWSPEDFELY+EGL+ SD
Sbjct: 186  ECARILRLLGTKTATFKLHLICRWSPEDFELYREGLDDSD 225


>gb|AFK33945.1| unknown [Lotus japonicus]
          Length = 229

 Score =  353 bits (905), Expect = 6e-95
 Identities = 170/220 (77%), Positives = 200/220 (90%)
 Frame = -2

Query: 1004 RNRPITLSKTKKKGREHKEVIVNSIREAVDNYNSIYVFSYENMRNLKFKEFREQLKSTSR 825
            RN+ +TLSKTKKKGREHKEVIVN+IR+A + Y+S+YVFS+ENMRNLKFKEFR++LKS+SR
Sbjct: 6    RNKQVTLSKTKKKGREHKEVIVNAIRDAAEKYSSLYVFSFENMRNLKFKEFRDRLKSSSR 65

Query: 824  FFLGSNKVMQISLGRKVDDEIRPGIYKVSKLLLGNSGLFFTNLAKEEVIRLFEEYEEHDF 645
            FFLGSNKVMQ++LGR   DEI+P +YKVSKLL G+SG+FFTNL+KEEV RLF  YEE+DF
Sbjct: 66   FFLGSNKVMQVALGRSASDEIKPRLYKVSKLLRGDSGMFFTNLSKEEVERLFNGYEEYDF 125

Query: 644  ARTGSTATEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDYVVCEEGAALSP 465
            ARTG  ATEKV+L+EGPL+QFTHEMEPFLRKQGMPVRLNKGVVELVSD VVCEEG  LSP
Sbjct: 126  ARTGGIATEKVDLQEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDLVVCEEGKPLSP 185

Query: 464  ESARILRLLGMQMATFRLHLICRWSPEDFELYKEGLEFSD 345
            E++RILRLLG++MATFRLHL+CRW+P+DFELY +G   SD
Sbjct: 186  EASRILRLLGIKMATFRLHLVCRWTPDDFELYIDGPGDSD 225