BLASTX nr result
ID: Cimicifuga21_contig00006644
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00006644
(3159 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni... 325 4e-86
emb|CBI30239.3| unnamed protein product [Vitis vinifera] 325 4e-86
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus] 323 2e-85
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni... 322 5e-85
ref|XP_004143302.1| PREDICTED: splicing factor U2af small subuni... 322 5e-85
>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis vinifera]
Length = 343
Score = 325 bits (834), Expect = 4e-86
Identities = 155/177 (87%), Positives = 161/177 (90%)
Frame = -1
Query: 3075 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 2896
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60
Query: 2895 GMDPQGQAMDPRRIQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 2716
G+DPQGQ +DPR+IQ LSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 2715 HAASAVQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS 2545
HAA+A++NL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKIS
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKIS 177
Score = 70.9 bits (172), Expect = 2e-09
Identities = 38/76 (50%), Positives = 49/76 (64%)
Frame = -1
Query: 2313 NKSPAGREGSAERRAKIEQWNREKEQADSGNKDNYNNTSNDDYENNGYAPNGEQYYDHXX 2134
NKSP REGSAERRAKIEQWNRE+EQA++ NK N N+ S++ NN + + +QYY+
Sbjct: 270 NKSPV-REGSAERRAKIEQWNREREQAEATNK-NDNSHSDNGNNNNDFEQDDQQYYNPQH 327
Query: 2133 XXXXXXXXXXQGGYDY 2086
GGY+Y
Sbjct: 328 QEEDQQQQQQHGGYNY 343
>emb|CBI30239.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 325 bits (834), Expect = 4e-86
Identities = 155/177 (87%), Positives = 161/177 (90%)
Frame = -1
Query: 3075 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 2896
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60
Query: 2895 GMDPQGQAMDPRRIQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 2716
G+DPQGQ +DPR+IQ LSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 2715 HAASAVQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS 2545
HAA+A++NL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKIS
Sbjct: 121 HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKIS 177
>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
Length = 310
Score = 323 bits (827), Expect = 2e-85
Identities = 152/177 (85%), Positives = 160/177 (90%)
Frame = -1
Query: 3075 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 2896
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL+NMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60
Query: 2895 GMDPQGQAMDPRRIQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 2716
G+DPQGQ +DPR+IQ LSKYGEIESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120
Query: 2715 HAASAVQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS 2545
HA A++NL+GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKIS
Sbjct: 121 HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
Score = 68.2 bits (165), Expect = 1e-08
Identities = 36/59 (61%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = -1
Query: 2313 NKSPAGREGSAERRAKIEQWNREKEQADSGNKD-NYNNTSNDDYENNGYAPNGEQYYDH 2140
++SP RE S ERRAKI QWNREKEQAD+GN D N++ T N NG+ NGE YYDH
Sbjct: 253 DRSPV-RENSEERRAKIAQWNREKEQADTGNNDVNHDVTDN---HANGFQDNGEDYYDH 307
>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 322 bits (824), Expect = 5e-85
Identities = 151/177 (85%), Positives = 160/177 (90%)
Frame = -1
Query: 3075 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 2896
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 2895 GMDPQGQAMDPRRIQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 2716
G+DPQGQA+DPR++Q LSKYG++ESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120
Query: 2715 HAASAVQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS 2545
AA+A+ NL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKIS
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177
>ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
sativus]
Length = 317
Score = 322 bits (824), Expect = 5e-85
Identities = 151/177 (85%), Positives = 160/177 (90%)
Frame = -1
Query: 3075 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 2896
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60
Query: 2895 GMDPQGQAMDPRRIQXXXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNVYVQFREEE 2716
G+DPQGQA+DPR++Q LSKYG++ESLNICDNLADHMVGNVYVQFREEE
Sbjct: 61 GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120
Query: 2715 HAASAVQNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKKIS 2545
AA+A+ NL GRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLKKIS
Sbjct: 121 QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKIS 177