BLASTX nr result

ID: Cimicifuga21_contig00006602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006602
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164840.1| PREDICTED: T-complex protein 1 subunit theta...   234   4e-60
ref|XP_004141139.1| PREDICTED: T-complex protein 1 subunit theta...   234   4e-60
ref|XP_002325835.1| predicted protein [Populus trichocarpa] gi|2...   229   1e-58
gb|ABK93043.1| unknown [Populus trichocarpa]                          229   1e-58
gb|ADL36829.1| TCP domain class transcription factor [Malus x do...   229   2e-58

>ref|XP_004164840.1| PREDICTED: T-complex protein 1 subunit theta-like, partial [Cucumis
           sativus]
          Length = 266

 Score =  234 bits (598), Expect = 4e-60
 Identities = 118/123 (95%), Positives = 122/123 (99%)
 Frame = -2

Query: 371 GIQSMLKEGHKHFSGVEEAVLKNIDACKQLSTITRTSLGPDGMNKMVINHLDKLYVTNDA 192
           GIQSMLKEGHKHFSG++EAVLKNIDACKQLSTITRTSLGP+GMNKMVINHLDKL+VTNDA
Sbjct: 9   GIQSMLKEGHKHFSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68

Query: 191 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRSGLHPSEII 12
           ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGELLQNAEELIR GLHPSEII
Sbjct: 69  ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEII 128

Query: 11  SGY 3
           SGY
Sbjct: 129 SGY 131


>ref|XP_004141139.1| PREDICTED: T-complex protein 1 subunit theta-like [Cucumis sativus]
          Length = 545

 Score =  234 bits (598), Expect = 4e-60
 Identities = 118/123 (95%), Positives = 122/123 (99%)
 Frame = -2

Query: 371 GIQSMLKEGHKHFSGVEEAVLKNIDACKQLSTITRTSLGPDGMNKMVINHLDKLYVTNDA 192
           GIQSMLKEGHKHFSG++EAVLKNIDACKQLSTITRTSLGP+GMNKMVINHLDKL+VTNDA
Sbjct: 9   GIQSMLKEGHKHFSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68

Query: 191 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRSGLHPSEII 12
           ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGELLQNAEELIR GLHPSEII
Sbjct: 69  ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEII 128

Query: 11  SGY 3
           SGY
Sbjct: 129 SGY 131


>ref|XP_002325835.1| predicted protein [Populus trichocarpa] gi|222862710|gb|EEF00217.1|
           predicted protein [Populus trichocarpa]
          Length = 545

 Score =  229 bits (585), Expect = 1e-58
 Identities = 114/123 (92%), Positives = 121/123 (98%)
 Frame = -2

Query: 371 GIQSMLKEGHKHFSGVEEAVLKNIDACKQLSTITRTSLGPDGMNKMVINHLDKLYVTNDA 192
           GIQSMLKEGHKH SG++EAVLKNIDACKQLSTITRTSLGP+GMNKMVINHLDKL+VTNDA
Sbjct: 9   GIQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68

Query: 191 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRSGLHPSEII 12
           ATIVNELEVQHPAAK+LVLAGKAQQEEIGDGANLTISFAGE+LQNA+ELIR GLHPSEII
Sbjct: 69  ATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGEILQNADELIRMGLHPSEII 128

Query: 11  SGY 3
           SGY
Sbjct: 129 SGY 131


>gb|ABK93043.1| unknown [Populus trichocarpa]
          Length = 545

 Score =  229 bits (585), Expect = 1e-58
 Identities = 114/123 (92%), Positives = 121/123 (98%)
 Frame = -2

Query: 371 GIQSMLKEGHKHFSGVEEAVLKNIDACKQLSTITRTSLGPDGMNKMVINHLDKLYVTNDA 192
           GIQSMLKEGHKH SG++EAVLKNIDACKQLSTITRTSLGP+GMNKMVINHLDKL+VTNDA
Sbjct: 9   GIQSMLKEGHKHLSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 68

Query: 191 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRSGLHPSEII 12
           ATIVNELEVQHPAAK+LVLAGKAQQEEIGDGANLTISFAGE+LQNA+ELIR GLHPSEII
Sbjct: 69  ATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGEILQNADELIRMGLHPSEII 128

Query: 11  SGY 3
           SGY
Sbjct: 129 SGY 131


>gb|ADL36829.1| TCP domain class transcription factor [Malus x domestica]
          Length = 541

 Score =  229 bits (584), Expect = 2e-58
 Identities = 114/123 (92%), Positives = 121/123 (98%)
 Frame = -2

Query: 371 GIQSMLKEGHKHFSGVEEAVLKNIDACKQLSTITRTSLGPDGMNKMVINHLDKLYVTNDA 192
           GIQSMLKEGHKH SG++EAV+KNIDACKQLSTITRTSLGP+GMNKMVINHLDKL+VTNDA
Sbjct: 5   GIQSMLKEGHKHLSGLDEAVVKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDA 64

Query: 191 ATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGELLQNAEELIRSGLHPSEII 12
           ATIVNELEVQHPAAK+LVLAG+AQQEEIGDGANLTISFAGELLQNAEELIR GLHPSEII
Sbjct: 65  ATIVNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEII 124

Query: 11  SGY 3
           SGY
Sbjct: 125 SGY 127


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