BLASTX nr result

ID: Cimicifuga21_contig00006510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006510
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23985.3| unnamed protein product [Vitis vinifera]               67   2e-09
emb|CAN81029.1| hypothetical protein VITISV_020535 [Vitis vinifera]    66   3e-09
ref|XP_004159274.1| PREDICTED: glutamate receptor 2.5-like [Cucu...    65   7e-09
ref|XP_004138837.1| PREDICTED: glutamate receptor 2.5-like [Cucu...    65   7e-09
ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...    64   1e-08

>emb|CBI23985.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
 Frame = -2

Query: 450 GFVFPIGSPLVSDISKAVLRVTEGKKLTEMEQAWFRPKTTCEEHQGTILTS---MYPSFL 280
           GF FPIGSPLV D+S+AVL VTEG ++  +E+ WF  KT+C +  G++L+S      SF 
Sbjct: 672 GFAFPIGSPLVPDVSRAVLIVTEGNEMVRIEKKWFSEKTSCSDDNGSLLSSNNISLDSFW 731

Query: 279 QIF---ATISVLAFLIASRVIFRK 217
            +F      S LA +I   +   K
Sbjct: 732 GLFLIAGVTSSLALIIGIAMFLHK 755


>emb|CAN81029.1| hypothetical protein VITISV_020535 [Vitis vinifera]
          Length = 971

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
 Frame = -2

Query: 450  GFVFPIGSPLVSDISKAVLRVTEGKKLTEMEQAWFRPKTTCEEHQGT-------ILTSMY 292
            GF FPIGSPLV D+S+AVL VTEG ++ ++E+ WFR KT+C +  G+        L S +
Sbjct: 768  GFAFPIGSPLVRDVSRAVLIVTEGNEMVKIEKKWFREKTSCSDDNGSSRSSNNISLDSFW 827

Query: 291  PSFLQIFATISVLAFLIASRVIFRK 217
              FL I    S LA +I   +   K
Sbjct: 828  GLFL-IAGVTSSLALIIGIAMFLHK 851


>ref|XP_004159274.1| PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]
          Length = 904

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -2

Query: 450  GFVFPIGSPLVSDISKAVLRVTEGKKLTEMEQAWFRPKTTCEEHQGTILTS--MYP-SFL 280
            GF FPIGSPLV DIS+AVL+VTE  ++ E+E AWF+    C   + + L+S  + P SF 
Sbjct: 795  GFGFPIGSPLVPDISRAVLQVTESDRMREIENAWFQKTKDCSASKASELSSSRLSPISFW 854

Query: 279  QIFATISVLAFLIASRVI 226
             +F  ISV++F+  +  I
Sbjct: 855  GLFMIISVVSFISCTSYI 872


>ref|XP_004138837.1| PREDICTED: glutamate receptor 2.5-like [Cucumis sativus]
          Length = 907

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -2

Query: 450  GFVFPIGSPLVSDISKAVLRVTEGKKLTEMEQAWFRPKTTCEEHQGTILTS--MYP-SFL 280
            GF FPIGSPLV DIS+AVL+VTE  ++ E+E AWF+    C   + + L+S  + P SF 
Sbjct: 798  GFGFPIGSPLVPDISRAVLQVTESDRMREIENAWFQKTKDCSASKASELSSSRLSPISFW 857

Query: 279  QIFATISVLAFLIASRVI 226
             +F  ISV++F+  +  I
Sbjct: 858  GLFMIISVVSFISCTSYI 875


>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
 Frame = -2

Query: 450  GFVFPIGSPLVSDISKAVLRVTEGKKLTEMEQAWFRPKTTCEEHQGTILTS---MYPSFL 280
            GF FP GSPLV D+S+AVL+VTEG ++ ++E+ WF  KT+C +  G+ L+S      SF 
Sbjct: 776  GFAFPRGSPLVQDVSRAVLKVTEGDEMVKIEKEWFGKKTSCSDDNGSSLSSNNISLDSFW 835

Query: 279  QIF---ATISVLAFLIASRVIFRK 217
             +F      S LA +I   +   K
Sbjct: 836  GLFLIAGATSSLALIIGIAMFLHK 859


Top