BLASTX nr result
ID: Cimicifuga21_contig00006379
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00006379
(1701 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3... 827 0.0
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera] 826 0.0
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3... 782 0.0
ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2... 782 0.0
ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2... 782 0.0
>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
Length = 510
Score = 827 bits (2136), Expect = 0.0
Identities = 391/483 (80%), Positives = 440/483 (91%)
Frame = -3
Query: 1645 SGMFNVPQTIGSVLCCKCGISMAPNAANMCAKCLRSEVDVTEGLQKHVIIMWCPECQSYL 1466
+GMF V QT+GSVLCCKCGI M PNAANMC KCLRSE+D+TEGLQKHV I+ CPEC +YL
Sbjct: 5 AGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPECDTYL 64
Query: 1465 QPPRTWIKAQLESKELLTFCVKRLKNLNRVRLMDAEFIWTEPHSKRIKVKLKVQKEVLNG 1286
QPP+TWIKAQLESKELLTFCVKRLKNLN+VRL+ AEFIWTEPHSKRIKVKL+VQKEVLNG
Sbjct: 65 QPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVLNG 124
Query: 1285 VVLEQDYIVEYVQTDHMCESCSRVAANPDQWVASVQLRQHVSHRRTFFYLEQLILKHDAA 1106
+LEQ YIVE+VQ +HMCESCSRV ANPDQWVASVQLRQHV HRRTFFYLEQLIL+HDAA
Sbjct: 125 AILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHDAA 184
Query: 1105 VRAIKIKQMDEGIDFFFANRSHALKFMDFVGKVVPTKSRSDKQLVSHDVKSNNYNYKYTF 926
RAIKIKQMD+GIDFFFANRSH +KF++F+GKV P++SR DKQLVSHD KSNNYNYKYTF
Sbjct: 185 GRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKYTF 244
Query: 925 SVEICPICREDLICLPPKVAASLGNLGPLVVCAKVSNNLLLLDPFTLRHSFMDADQYWRA 746
SVEICPICREDLICLPPKVA SLGNLGPLV+C KVSNN+ LLDPFTLRH F+DADQYWR+
Sbjct: 245 SVEICPICREDLICLPPKVAVSLGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRS 304
Query: 745 PFRQLLSHKRLVEYIVLDVEPVSSEVTVAGSKYVVADVQVARVSDFGKNDKMFIVRTHLG 566
F+ LLS ++LVEYIVLDVE VSSEV V GSKY +AD QVARVSDFGKND +F +RTHLG
Sbjct: 305 SFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLG 364
Query: 565 HLLNPGDYALGYDLYGANSNDIELDKYKNLVIPDAILIKKSYEEKRLKKRGKPRAWKLKS 386
HLLNPGD+ALGYD+Y ANSND+EL+KY+ V+P+AILIKKSYEEKR +KRGKPR+WKLKS
Sbjct: 365 HLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKS 424
Query: 385 MNMEVDNTSRKLDEDKMNAEYEDFLKDLEENPELRFNISLYRNKEYQPSEMASVTDGEDA 206
+NMEVD++ + D++KMN EYE FL+DLEE+PELRFNISLYRNKEYQPSEMAS+TDGED
Sbjct: 425 LNMEVDDSKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDL 484
Query: 205 PSV 197
PSV
Sbjct: 485 PSV 487
>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
Length = 594
Score = 826 bits (2133), Expect = 0.0
Identities = 390/483 (80%), Positives = 440/483 (91%)
Frame = -3
Query: 1645 SGMFNVPQTIGSVLCCKCGISMAPNAANMCAKCLRSEVDVTEGLQKHVIIMWCPECQSYL 1466
+GMF V QT+GSVLCCKCGI M PNAANMC KCLRSE+D+TEGLQKHV I+ CPEC +YL
Sbjct: 5 AGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPECDTYL 64
Query: 1465 QPPRTWIKAQLESKELLTFCVKRLKNLNRVRLMDAEFIWTEPHSKRIKVKLKVQKEVLNG 1286
QPP+TWIKAQLESKELLTFCVKRLKNLN+VRL+ AEFIWTEPHSKRIKVKL+VQKEVLNG
Sbjct: 65 QPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVLNG 124
Query: 1285 VVLEQDYIVEYVQTDHMCESCSRVAANPDQWVASVQLRQHVSHRRTFFYLEQLILKHDAA 1106
+LEQ YIVE+VQ +HMCESCSRV ANPDQWVASVQLRQHV HRRTFFYLEQLIL+HDAA
Sbjct: 125 AILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHDAA 184
Query: 1105 VRAIKIKQMDEGIDFFFANRSHALKFMDFVGKVVPTKSRSDKQLVSHDVKSNNYNYKYTF 926
RAIKIKQMD+GIDFFFANRSH +KF++F+GKV P++SR DKQLVSHD KSNNYNYKYTF
Sbjct: 185 GRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKYTF 244
Query: 925 SVEICPICREDLICLPPKVAASLGNLGPLVVCAKVSNNLLLLDPFTLRHSFMDADQYWRA 746
SVEICPICREDLICLPPKVA SLGNLGP+V+C KVSNN+ LLDPFTLRH F+DADQYWR+
Sbjct: 245 SVEICPICREDLICLPPKVAVSLGNLGPVVICTKVSNNIALLDPFTLRHCFLDADQYWRS 304
Query: 745 PFRQLLSHKRLVEYIVLDVEPVSSEVTVAGSKYVVADVQVARVSDFGKNDKMFIVRTHLG 566
F+ LLS ++LVEYIVLDVE VSSEV V GSKY +AD QVARVSDFGKND +F +RTHLG
Sbjct: 305 SFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLG 364
Query: 565 HLLNPGDYALGYDLYGANSNDIELDKYKNLVIPDAILIKKSYEEKRLKKRGKPRAWKLKS 386
HLLNPGD+ALGYD+Y ANSND+EL+KY+ V+P+AILIKKSYEEKR +KRGKPR+WKLKS
Sbjct: 365 HLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKS 424
Query: 385 MNMEVDNTSRKLDEDKMNAEYEDFLKDLEENPELRFNISLYRNKEYQPSEMASVTDGEDA 206
+NMEVD++ + D++KMN EYE FL+DLEE+PELRFNISLYRNKEYQPSEMAS+TDGED
Sbjct: 425 LNMEVDDSKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQPSEMASMTDGEDL 484
Query: 205 PSV 197
PSV
Sbjct: 485 PSV 487
>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
Length = 505
Score = 782 bits (2020), Expect = 0.0
Identities = 370/487 (75%), Positives = 433/487 (88%)
Frame = -3
Query: 1657 MDGGSGMFNVPQTIGSVLCCKCGISMAPNAANMCAKCLRSEVDVTEGLQKHVIIMWCPEC 1478
M +G+F+V QTIG+VLCCKCGI MAPNAANMC KCL SEVD+TEGLQK + IM CP+C
Sbjct: 1 MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 1477 QSYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLMDAEFIWTEPHSKRIKVKLKVQKE 1298
+SYLQPPRTWIKAQLESKELLTFC+KRL+NLN+V+L+ AEF+WTEPHSKRIKVKLKVQKE
Sbjct: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKE 120
Query: 1297 VLNGVVLEQDYIVEYVQTDHMCESCSRVAANPDQWVASVQLRQHVSHRRTFFYLEQLILK 1118
VL G +LEQ Y+ EYV DH+CESCSR+ ANPDQWVASVQLRQHV HRRTFF+LEQLILK
Sbjct: 121 VLQGAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILK 180
Query: 1117 HDAAVRAIKIKQMDEGIDFFFANRSHALKFMDFVGKVVPTKSRSDKQLVSHDVKSNNYNY 938
H AA AI+IKQMD+GIDFFF+NRSH +KF++FVGKV P +SR DKQLVSHD KSN +N+
Sbjct: 181 HGAAASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNH 240
Query: 937 KYTFSVEICPICREDLICLPPKVAASLGNLGPLVVCAKVSNNLLLLDPFTLRHSFMDADQ 758
K+TFSVEI PICREDLICLPPKVA SLGNLGPLV+C KV+N + LLDPFTLRH F+DADQ
Sbjct: 241 KHTFSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQ 300
Query: 757 YWRAPFRQLLSHKRLVEYIVLDVEPVSSEVTVAGSKYVVADVQVARVSDFGKNDKMFIVR 578
YWR FR LL+ ++LVEY+VLD+E VS+EV VAGSKY++A QVARVSDFG+ND MF ++
Sbjct: 301 YWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIK 360
Query: 577 THLGHLLNPGDYALGYDLYGANSNDIELDKYKNLVIPDAILIKKSYEEKRLKKRGKPRAW 398
THLGH+LNPGDYALGYDLYGANSND+EL+KYK L +P+AILIKKSYEEKR +KRGKPR+W
Sbjct: 361 THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSW 420
Query: 397 KLKSMNMEVDNTSRKLDEDKMNAEYEDFLKDLEENPELRFNISLYRNKEYQPSEMASVTD 218
KLKS++M+VD+ + K+DE+KMN+EYE FL+DLEENP+LRFNISLYRN+EYQPSE +TD
Sbjct: 421 KLKSLSMDVDDKT-KVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSE---ITD 476
Query: 217 GEDAPSV 197
GED PSV
Sbjct: 477 GEDGPSV 483
>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
predicted protein [Populus trichocarpa]
Length = 511
Score = 782 bits (2019), Expect = 0.0
Identities = 366/484 (75%), Positives = 431/484 (89%), Gaps = 1/484 (0%)
Frame = -3
Query: 1645 SGMFNVPQTIGSVLCCKCGISMAPNAANMCAKCLRSEVDVTEGLQKHVIIMWCPECQSYL 1466
+GMF V QTIGSVLCCKCGI M PNAANMC KCLRSEVD+TEGL+K+VI++ CPEC +YL
Sbjct: 5 AGMFMVHQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLKKNVILLHCPECDTYL 64
Query: 1465 QPPRTWIKAQLESKELLTFCVKRLK-NLNRVRLMDAEFIWTEPHSKRIKVKLKVQKEVLN 1289
PP T I+AQLES+EL+ FC+K+LK V L++AEFIWTEPHSKRIK++++VQKEVL+
Sbjct: 65 DPPSTRIRAQLESRELMAFCLKKLKLKSTGVILVNAEFIWTEPHSKRIKLRVRVQKEVLH 124
Query: 1288 GVVLEQDYIVEYVQTDHMCESCSRVAANPDQWVASVQLRQHVSHRRTFFYLEQLILKHDA 1109
G +LEQ Y++EYVQ D MC+SC+RV ANPDQWVA VQLRQHV+HRRTFFYLEQLILKHDA
Sbjct: 125 GAILEQAYVIEYVQQDQMCDSCTRVQANPDQWVAGVQLRQHVAHRRTFFYLEQLILKHDA 184
Query: 1108 AVRAIKIKQMDEGIDFFFANRSHALKFMDFVGKVVPTKSRSDKQLVSHDVKSNNYNYKYT 929
A RAIKIKQMD GIDFFFANRSH +KF+DFVGKV P KSR+DKQLVSHD KSNNYNYK+T
Sbjct: 185 AARAIKIKQMDHGIDFFFANRSHGVKFVDFVGKVAPVKSRNDKQLVSHDTKSNNYNYKHT 244
Query: 928 FSVEICPICREDLICLPPKVAASLGNLGPLVVCAKVSNNLLLLDPFTLRHSFMDADQYWR 749
FSVEI PICREDL+CLPP+VA SLGNLGPLV+C+KV+N++ LLDPFTLRH F+DADQYWR
Sbjct: 245 FSVEISPICREDLVCLPPRVAVSLGNLGPLVICSKVTNSIALLDPFTLRHCFLDADQYWR 304
Query: 748 APFRQLLSHKRLVEYIVLDVEPVSSEVTVAGSKYVVADVQVARVSDFGKNDKMFIVRTHL 569
PF+ LL+ ++LVEYIV DV+ VS EV + GS+Y +AD VAR+SDFGKND MF ++THL
Sbjct: 305 TPFKSLLTSRQLVEYIVFDVDFVSPEVNIGGSRYALADATVARMSDFGKNDTMFNIKTHL 364
Query: 568 GHLLNPGDYALGYDLYGANSNDIELDKYKNLVIPDAILIKKSYEEKRLKKRGKPRAWKLK 389
GH+L PGDYALGYDL+GANSND+ELDKYKNLVIP+AIL+KKSYEEKR +KRGKPR+WKLK
Sbjct: 365 GHILKPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLK 424
Query: 388 SMNMEVDNTSRKLDEDKMNAEYEDFLKDLEENPELRFNISLYRNKEYQPSEMASVTDGED 209
S+NMEVD+T + D++KMN+EYE FL+DLEENPELRFN+SLYRNKEYQPSEMAS+TDGED
Sbjct: 425 SLNMEVDDTRARGDQEKMNSEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGED 484
Query: 208 APSV 197
PS+
Sbjct: 485 IPSI 488
>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
predicted protein [Populus trichocarpa]
Length = 511
Score = 782 bits (2019), Expect = 0.0
Identities = 366/484 (75%), Positives = 431/484 (89%), Gaps = 1/484 (0%)
Frame = -3
Query: 1645 SGMFNVPQTIGSVLCCKCGISMAPNAANMCAKCLRSEVDVTEGLQKHVIIMWCPECQSYL 1466
+GMF V QTIGSVLCCKCGI M PNAANMC KCLRSEVD+TEGL+K+VI++ CPEC +YL
Sbjct: 5 AGMFMVHQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLKKNVILLHCPECDTYL 64
Query: 1465 QPPRTWIKAQLESKELLTFCVKRLK-NLNRVRLMDAEFIWTEPHSKRIKVKLKVQKEVLN 1289
PP T I+AQLES+EL+ FC+K+LK V L++AEFIWTEPHSKRIK++++VQKEVL+
Sbjct: 65 DPPSTRIRAQLESRELMAFCLKKLKLKSTGVILVNAEFIWTEPHSKRIKLRVRVQKEVLH 124
Query: 1288 GVVLEQDYIVEYVQTDHMCESCSRVAANPDQWVASVQLRQHVSHRRTFFYLEQLILKHDA 1109
G +LEQ Y++EYVQ D MC+SC+RV ANPDQWVA VQLRQHV+HRRTFFYLEQLILKHDA
Sbjct: 125 GAILEQAYVIEYVQQDQMCDSCTRVQANPDQWVAGVQLRQHVAHRRTFFYLEQLILKHDA 184
Query: 1108 AVRAIKIKQMDEGIDFFFANRSHALKFMDFVGKVVPTKSRSDKQLVSHDVKSNNYNYKYT 929
A RAIKIKQMD GIDFFFANRSH +KF+DFVGKV P KSR+DKQLVSHD KSNNYNYK+T
Sbjct: 185 AARAIKIKQMDHGIDFFFANRSHGVKFVDFVGKVAPVKSRNDKQLVSHDTKSNNYNYKHT 244
Query: 928 FSVEICPICREDLICLPPKVAASLGNLGPLVVCAKVSNNLLLLDPFTLRHSFMDADQYWR 749
FSVEI PICREDL+CLPP+VA SLGNLGPLV+C+KV+N++ LLDPFTLRH F+DADQYWR
Sbjct: 245 FSVEISPICREDLVCLPPRVAVSLGNLGPLVICSKVTNSIALLDPFTLRHCFLDADQYWR 304
Query: 748 APFRQLLSHKRLVEYIVLDVEPVSSEVTVAGSKYVVADVQVARVSDFGKNDKMFIVRTHL 569
PF+ LL+ ++LVEYIV DV+ VS EV + GS+Y +AD VAR+SDFGKND MF ++THL
Sbjct: 305 TPFKSLLTSRQLVEYIVFDVDFVSPEVNIGGSRYALADATVARMSDFGKNDTMFNIKTHL 364
Query: 568 GHLLNPGDYALGYDLYGANSNDIELDKYKNLVIPDAILIKKSYEEKRLKKRGKPRAWKLK 389
GH+L PGDYALGYDL+GANSND+ELDKYKNLVIP+AIL+KKSYEEKR +KRGKPR+WKLK
Sbjct: 365 GHILKPGDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLK 424
Query: 388 SMNMEVDNTSRKLDEDKMNAEYEDFLKDLEENPELRFNISLYRNKEYQPSEMASVTDGED 209
S+NMEVD+T + D++KMN+EYE FL+DLEENPELRFN+SLYRNKEYQPSEMAS+TDGED
Sbjct: 425 SLNMEVDDTRARGDQEKMNSEYEQFLRDLEENPELRFNVSLYRNKEYQPSEMASMTDGED 484
Query: 208 APSV 197
PS+
Sbjct: 485 IPSI 488