BLASTX nr result
ID: Cimicifuga21_contig00006266
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00006266 (1038 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN76620.1| hypothetical protein VITISV_038357 [Vitis vinifera] 205 3e-60 ref|XP_002280707.1| PREDICTED: glycine cleavage system H protein... 204 5e-60 ref|XP_002519845.1| glycine cleavage system h protein, putative ... 198 1e-55 ref|XP_004148493.1| PREDICTED: glycine cleavage system H protein... 194 2e-55 ref|XP_003611464.1| Glycine cleavage system H protein [Medicago ... 199 3e-55 >emb|CAN76620.1| hypothetical protein VITISV_038357 [Vitis vinifera] Length = 165 Score = 205 bits (522), Expect(2) = 3e-60 Identities = 105/143 (73%), Positives = 113/143 (79%) Frame = +3 Query: 321 EWVKHEGPVATIGITDHAQDHLGEVVFVELPEPGLSVSKGSSFGAVESVKATSDINSPVS 500 EWVKHEG VATIGITDHAQDHLGEVVFVELPEPG SVSKG+ FGAVESVKATSDINSP+S Sbjct: 48 EWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGGSVSKGNGFGAVESVKATSDINSPIS 107 Query: 501 GEVVEVNSKLTESPGLINTSPYEXXXXXXXXXXXXXXXXXXINTSPYEEGWMIKVKPSSP 680 GEVVEVNSKL+ESPGLIN +SPYE+GWMIKVKP +P Sbjct: 108 GEVVEVNSKLSESPGLIN-------------------------SSPYEDGWMIKVKPGNP 142 Query: 681 AELESLMGSKDYTKFCEEEDAAH 749 +ELESLMG K+YTKFCEEEDAAH Sbjct: 143 SELESLMGPKEYTKFCEEEDAAH 165 Score = 53.9 bits (128), Expect(2) = 3e-60 Identities = 27/36 (75%), Positives = 30/36 (83%), Gaps = 4/36 (11%) Frame = +2 Query: 128 MAMRMWASSTANALKISCASKT----AFSLPRCFSS 223 MA+RMWASSTANAL++SCASK AFSL RCFSS Sbjct: 1 MALRMWASSTANALRVSCASKAHVSPAFSLSRCFSS 36 >ref|XP_002280707.1| PREDICTED: glycine cleavage system H protein, mitochondrial isoform 1 [Vitis vinifera] gi|297742112|emb|CBI33899.3| unnamed protein product [Vitis vinifera] Length = 165 Score = 204 bits (520), Expect(2) = 5e-60 Identities = 103/143 (72%), Positives = 114/143 (79%) Frame = +3 Query: 321 EWVKHEGPVATIGITDHAQDHLGEVVFVELPEPGLSVSKGSSFGAVESVKATSDINSPVS 500 EWVKHEG VATIGITDHAQDHLGEVVFVE+PEPG SVSKG+ FGAVESVKATSD+NSP+S Sbjct: 48 EWVKHEGSVATIGITDHAQDHLGEVVFVEIPEPGGSVSKGNGFGAVESVKATSDVNSPIS 107 Query: 501 GEVVEVNSKLTESPGLINTSPYEXXXXXXXXXXXXXXXXXXINTSPYEEGWMIKVKPSSP 680 GEVVEVNSKL+E+PGLIN +SPYE+GWMIKVKPS+P Sbjct: 108 GEVVEVNSKLSEAPGLIN-------------------------SSPYEDGWMIKVKPSNP 142 Query: 681 AELESLMGSKDYTKFCEEEDAAH 749 +ELESLMG K+YTKFCEEEDAAH Sbjct: 143 SELESLMGPKEYTKFCEEEDAAH 165 Score = 53.9 bits (128), Expect(2) = 5e-60 Identities = 27/36 (75%), Positives = 30/36 (83%), Gaps = 4/36 (11%) Frame = +2 Query: 128 MAMRMWASSTANALKISCASKT----AFSLPRCFSS 223 MA+RMWASSTANAL++SCASK AFSL RCFSS Sbjct: 1 MALRMWASSTANALRVSCASKAHVSPAFSLSRCFSS 36 >ref|XP_002519845.1| glycine cleavage system h protein, putative [Ricinus communis] gi|223540891|gb|EEF42449.1| glycine cleavage system h protein, putative [Ricinus communis] Length = 165 Score = 198 bits (504), Expect(2) = 1e-55 Identities = 100/143 (69%), Positives = 111/143 (77%) Frame = +3 Query: 321 EWVKHEGPVATIGITDHAQDHLGEVVFVELPEPGLSVSKGSSFGAVESVKATSDINSPVS 500 EWVKHEG VATIGITDHAQDHLGEVVFV+LPE G SV++G SFGAVESVKATSD+NSP+S Sbjct: 48 EWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGTSVTQGKSFGAVESVKATSDVNSPIS 107 Query: 501 GEVVEVNSKLTESPGLINTSPYEXXXXXXXXXXXXXXXXXXINTSPYEEGWMIKVKPSSP 680 GEVVEVN+KLTE PG IN +SPYEEGWMIKVKP++P Sbjct: 108 GEVVEVNTKLTEGPGSIN-------------------------SSPYEEGWMIKVKPNNP 142 Query: 681 AELESLMGSKDYTKFCEEEDAAH 749 +ELESLMG K+YTKFCEEEDAAH Sbjct: 143 SELESLMGPKEYTKFCEEEDAAH 165 Score = 45.8 bits (107), Expect(2) = 1e-55 Identities = 24/36 (66%), Positives = 27/36 (75%), Gaps = 4/36 (11%) Frame = +2 Query: 128 MAMRMWASSTANALKISCASKT----AFSLPRCFSS 223 MA+RMWASSTAN LKIS A K ++SL RCFSS Sbjct: 1 MALRMWASSTANTLKISVACKAQLSPSYSLSRCFSS 36 >ref|XP_004148493.1| PREDICTED: glycine cleavage system H protein, mitochondrial-like [Cucumis sativus] gi|449513621|ref|XP_004164375.1| PREDICTED: glycine cleavage system H protein, mitochondrial-like [Cucumis sativus] Length = 165 Score = 194 bits (493), Expect(2) = 2e-55 Identities = 98/143 (68%), Positives = 109/143 (76%) Frame = +3 Query: 321 EWVKHEGPVATIGITDHAQDHLGEVVFVELPEPGLSVSKGSSFGAVESVKATSDINSPVS 500 EWVKHEG VAT+GITDHAQDHLGEVVFV+LPE G SVS+G SFGAVESVKATSDINSP+S Sbjct: 48 EWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPIS 107 Query: 501 GEVVEVNSKLTESPGLINTSPYEXXXXXXXXXXXXXXXXXXINTSPYEEGWMIKVKPSSP 680 GE+VEVN +L ESPGLIN+SPYE GWMIKVKPS+P Sbjct: 108 GEIVEVNPQLKESPGLINSSPYEG-------------------------GWMIKVKPSNP 142 Query: 681 AELESLMGSKDYTKFCEEEDAAH 749 EL+SL+G K+YTKFCEEEDAAH Sbjct: 143 GELDSLLGPKEYTKFCEEEDAAH 165 Score = 49.3 bits (116), Expect(2) = 2e-55 Identities = 25/36 (69%), Positives = 30/36 (83%), Gaps = 4/36 (11%) Frame = +2 Query: 128 MAMRMWASSTANALKISCASKT----AFSLPRCFSS 223 MA+RMWASSTANALK+S +SKT +FSL RCFS+ Sbjct: 1 MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFST 36 >ref|XP_003611464.1| Glycine cleavage system H protein [Medicago truncatula] gi|355512799|gb|AES94422.1| Glycine cleavage system H protein [Medicago truncatula] gi|388518315|gb|AFK47219.1| unknown [Medicago truncatula] Length = 166 Score = 199 bits (507), Expect(2) = 3e-55 Identities = 99/143 (69%), Positives = 111/143 (77%) Frame = +3 Query: 321 EWVKHEGPVATIGITDHAQDHLGEVVFVELPEPGLSVSKGSSFGAVESVKATSDINSPVS 500 EWVKHEG VATIGITDHAQDHLGEVVFVELPEPG SV+KG+ FGAVESVKATSD+NSP+S Sbjct: 49 EWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGGSVTKGNGFGAVESVKATSDVNSPIS 108 Query: 501 GEVVEVNSKLTESPGLINTSPYEXXXXXXXXXXXXXXXXXXINTSPYEEGWMIKVKPSSP 680 GE+VEVN KLT PGLIN +SPYE+GWMIK+KPS P Sbjct: 109 GEIVEVNDKLTGKPGLIN-------------------------SSPYEDGWMIKIKPSDP 143 Query: 681 AELESLMGSKDYTKFCEEEDAAH 749 +ELESL+G+K+YTKFCEEEDAAH Sbjct: 144 SELESLLGAKEYTKFCEEEDAAH 166 Score = 43.1 bits (100), Expect(2) = 3e-55 Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 5/37 (13%) Frame = +2 Query: 128 MAMRMWASSTANALKISCAS-----KTAFSLPRCFSS 223 MA+RMWASSTANALK+S +S FS+ RCFS+ Sbjct: 1 MALRMWASSTANALKLSSSSSRLHLSPPFSISRCFST 37