BLASTX nr result

ID: Cimicifuga21_contig00006266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006266
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76620.1| hypothetical protein VITISV_038357 [Vitis vinifera]   205   3e-60
ref|XP_002280707.1| PREDICTED: glycine cleavage system H protein...   204   5e-60
ref|XP_002519845.1| glycine cleavage system h protein, putative ...   198   1e-55
ref|XP_004148493.1| PREDICTED: glycine cleavage system H protein...   194   2e-55
ref|XP_003611464.1| Glycine cleavage system H protein [Medicago ...   199   3e-55

>emb|CAN76620.1| hypothetical protein VITISV_038357 [Vitis vinifera]
          Length = 165

 Score =  205 bits (522), Expect(2) = 3e-60
 Identities = 105/143 (73%), Positives = 113/143 (79%)
 Frame = +3

Query: 321 EWVKHEGPVATIGITDHAQDHLGEVVFVELPEPGLSVSKGSSFGAVESVKATSDINSPVS 500
           EWVKHEG VATIGITDHAQDHLGEVVFVELPEPG SVSKG+ FGAVESVKATSDINSP+S
Sbjct: 48  EWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGGSVSKGNGFGAVESVKATSDINSPIS 107

Query: 501 GEVVEVNSKLTESPGLINTSPYEXXXXXXXXXXXXXXXXXXINTSPYEEGWMIKVKPSSP 680
           GEVVEVNSKL+ESPGLIN                         +SPYE+GWMIKVKP +P
Sbjct: 108 GEVVEVNSKLSESPGLIN-------------------------SSPYEDGWMIKVKPGNP 142

Query: 681 AELESLMGSKDYTKFCEEEDAAH 749
           +ELESLMG K+YTKFCEEEDAAH
Sbjct: 143 SELESLMGPKEYTKFCEEEDAAH 165



 Score = 53.9 bits (128), Expect(2) = 3e-60
 Identities = 27/36 (75%), Positives = 30/36 (83%), Gaps = 4/36 (11%)
 Frame = +2

Query: 128 MAMRMWASSTANALKISCASKT----AFSLPRCFSS 223
           MA+RMWASSTANAL++SCASK     AFSL RCFSS
Sbjct: 1   MALRMWASSTANALRVSCASKAHVSPAFSLSRCFSS 36


>ref|XP_002280707.1| PREDICTED: glycine cleavage system H protein, mitochondrial isoform
           1 [Vitis vinifera] gi|297742112|emb|CBI33899.3| unnamed
           protein product [Vitis vinifera]
          Length = 165

 Score =  204 bits (520), Expect(2) = 5e-60
 Identities = 103/143 (72%), Positives = 114/143 (79%)
 Frame = +3

Query: 321 EWVKHEGPVATIGITDHAQDHLGEVVFVELPEPGLSVSKGSSFGAVESVKATSDINSPVS 500
           EWVKHEG VATIGITDHAQDHLGEVVFVE+PEPG SVSKG+ FGAVESVKATSD+NSP+S
Sbjct: 48  EWVKHEGSVATIGITDHAQDHLGEVVFVEIPEPGGSVSKGNGFGAVESVKATSDVNSPIS 107

Query: 501 GEVVEVNSKLTESPGLINTSPYEXXXXXXXXXXXXXXXXXXINTSPYEEGWMIKVKPSSP 680
           GEVVEVNSKL+E+PGLIN                         +SPYE+GWMIKVKPS+P
Sbjct: 108 GEVVEVNSKLSEAPGLIN-------------------------SSPYEDGWMIKVKPSNP 142

Query: 681 AELESLMGSKDYTKFCEEEDAAH 749
           +ELESLMG K+YTKFCEEEDAAH
Sbjct: 143 SELESLMGPKEYTKFCEEEDAAH 165



 Score = 53.9 bits (128), Expect(2) = 5e-60
 Identities = 27/36 (75%), Positives = 30/36 (83%), Gaps = 4/36 (11%)
 Frame = +2

Query: 128 MAMRMWASSTANALKISCASKT----AFSLPRCFSS 223
           MA+RMWASSTANAL++SCASK     AFSL RCFSS
Sbjct: 1   MALRMWASSTANALRVSCASKAHVSPAFSLSRCFSS 36


>ref|XP_002519845.1| glycine cleavage system h protein, putative [Ricinus communis]
           gi|223540891|gb|EEF42449.1| glycine cleavage system h
           protein, putative [Ricinus communis]
          Length = 165

 Score =  198 bits (504), Expect(2) = 1e-55
 Identities = 100/143 (69%), Positives = 111/143 (77%)
 Frame = +3

Query: 321 EWVKHEGPVATIGITDHAQDHLGEVVFVELPEPGLSVSKGSSFGAVESVKATSDINSPVS 500
           EWVKHEG VATIGITDHAQDHLGEVVFV+LPE G SV++G SFGAVESVKATSD+NSP+S
Sbjct: 48  EWVKHEGSVATIGITDHAQDHLGEVVFVDLPEAGTSVTQGKSFGAVESVKATSDVNSPIS 107

Query: 501 GEVVEVNSKLTESPGLINTSPYEXXXXXXXXXXXXXXXXXXINTSPYEEGWMIKVKPSSP 680
           GEVVEVN+KLTE PG IN                         +SPYEEGWMIKVKP++P
Sbjct: 108 GEVVEVNTKLTEGPGSIN-------------------------SSPYEEGWMIKVKPNNP 142

Query: 681 AELESLMGSKDYTKFCEEEDAAH 749
           +ELESLMG K+YTKFCEEEDAAH
Sbjct: 143 SELESLMGPKEYTKFCEEEDAAH 165



 Score = 45.8 bits (107), Expect(2) = 1e-55
 Identities = 24/36 (66%), Positives = 27/36 (75%), Gaps = 4/36 (11%)
 Frame = +2

Query: 128 MAMRMWASSTANALKISCASKT----AFSLPRCFSS 223
           MA+RMWASSTAN LKIS A K     ++SL RCFSS
Sbjct: 1   MALRMWASSTANTLKISVACKAQLSPSYSLSRCFSS 36


>ref|XP_004148493.1| PREDICTED: glycine cleavage system H protein, mitochondrial-like
           [Cucumis sativus] gi|449513621|ref|XP_004164375.1|
           PREDICTED: glycine cleavage system H protein,
           mitochondrial-like [Cucumis sativus]
          Length = 165

 Score =  194 bits (493), Expect(2) = 2e-55
 Identities = 98/143 (68%), Positives = 109/143 (76%)
 Frame = +3

Query: 321 EWVKHEGPVATIGITDHAQDHLGEVVFVELPEPGLSVSKGSSFGAVESVKATSDINSPVS 500
           EWVKHEG VAT+GITDHAQDHLGEVVFV+LPE G SVS+G SFGAVESVKATSDINSP+S
Sbjct: 48  EWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPIS 107

Query: 501 GEVVEVNSKLTESPGLINTSPYEXXXXXXXXXXXXXXXXXXINTSPYEEGWMIKVKPSSP 680
           GE+VEVN +L ESPGLIN+SPYE                          GWMIKVKPS+P
Sbjct: 108 GEIVEVNPQLKESPGLINSSPYEG-------------------------GWMIKVKPSNP 142

Query: 681 AELESLMGSKDYTKFCEEEDAAH 749
            EL+SL+G K+YTKFCEEEDAAH
Sbjct: 143 GELDSLLGPKEYTKFCEEEDAAH 165



 Score = 49.3 bits (116), Expect(2) = 2e-55
 Identities = 25/36 (69%), Positives = 30/36 (83%), Gaps = 4/36 (11%)
 Frame = +2

Query: 128 MAMRMWASSTANALKISCASKT----AFSLPRCFSS 223
           MA+RMWASSTANALK+S +SKT    +FSL RCFS+
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFST 36


>ref|XP_003611464.1| Glycine cleavage system H protein [Medicago truncatula]
           gi|355512799|gb|AES94422.1| Glycine cleavage system H
           protein [Medicago truncatula]
           gi|388518315|gb|AFK47219.1| unknown [Medicago
           truncatula]
          Length = 166

 Score =  199 bits (507), Expect(2) = 3e-55
 Identities = 99/143 (69%), Positives = 111/143 (77%)
 Frame = +3

Query: 321 EWVKHEGPVATIGITDHAQDHLGEVVFVELPEPGLSVSKGSSFGAVESVKATSDINSPVS 500
           EWVKHEG VATIGITDHAQDHLGEVVFVELPEPG SV+KG+ FGAVESVKATSD+NSP+S
Sbjct: 49  EWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGGSVTKGNGFGAVESVKATSDVNSPIS 108

Query: 501 GEVVEVNSKLTESPGLINTSPYEXXXXXXXXXXXXXXXXXXINTSPYEEGWMIKVKPSSP 680
           GE+VEVN KLT  PGLIN                         +SPYE+GWMIK+KPS P
Sbjct: 109 GEIVEVNDKLTGKPGLIN-------------------------SSPYEDGWMIKIKPSDP 143

Query: 681 AELESLMGSKDYTKFCEEEDAAH 749
           +ELESL+G+K+YTKFCEEEDAAH
Sbjct: 144 SELESLLGAKEYTKFCEEEDAAH 166



 Score = 43.1 bits (100), Expect(2) = 3e-55
 Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 5/37 (13%)
 Frame = +2

Query: 128 MAMRMWASSTANALKISCAS-----KTAFSLPRCFSS 223
           MA+RMWASSTANALK+S +S        FS+ RCFS+
Sbjct: 1   MALRMWASSTANALKLSSSSSRLHLSPPFSISRCFST 37


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