BLASTX nr result

ID: Cimicifuga21_contig00006257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00006257
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536...   100   2e-19
ref|XP_003621661.1| SKP1-like protein [Medicago truncatula] gi|3...    97   2e-18
ref|XP_002279232.1| PREDICTED: SKP1-like protein 1A [Vitis vinif...    96   2e-18
dbj|BAJ53099.1| JHL20J20.6 [Jatropha curcas]                           96   4e-18
ref|NP_001241052.1| uncharacterized protein LOC100798104 [Glycin...    96   4e-18

>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
           protein [Gossypium hirsutum]
          Length = 156

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/72 (62%), Positives = 56/72 (77%)
 Frame = -2

Query: 218 EVFEVEEAVVSQSETIKNMIEDGCADDHIPVPNVTGSILAKVLEYCKRHIVEPREDDEEG 39
           E FEV+EAV  +S+TIK+MIED CAD+ IP+PNVT  ILAKV+EYCK+H+  P+ DD   
Sbjct: 16  ESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCKKHVEAPKTDDRSA 75

Query: 38  KRELKQWDAEFV 3
             ELK WDA+FV
Sbjct: 76  DDELKSWDADFV 87


>ref|XP_003621661.1| SKP1-like protein [Medicago truncatula] gi|355496676|gb|AES77879.1|
           SKP1-like protein [Medicago truncatula]
          Length = 156

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/72 (61%), Positives = 55/72 (76%)
 Frame = -2

Query: 218 EVFEVEEAVVSQSETIKNMIEDGCADDHIPVPNVTGSILAKVLEYCKRHIVEPREDDEEG 39
           E FEV EAV  +S+TIK+MIED C D+ IPVPNVTG ILAKV+EYCK+H+     D++  
Sbjct: 16  ETFEVPEAVALESQTIKHMIEDDCTDNGIPVPNVTGQILAKVIEYCKKHVDAASSDEKPS 75

Query: 38  KRELKQWDAEFV 3
           + +LK WDAEFV
Sbjct: 76  EDDLKNWDAEFV 87


>ref|XP_002279232.1| PREDICTED: SKP1-like protein 1A [Vitis vinifera]
           gi|147820987|emb|CAN73136.1| hypothetical protein
           VITISV_023042 [Vitis vinifera]
          Length = 155

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/72 (58%), Positives = 56/72 (77%)
 Frame = -2

Query: 218 EVFEVEEAVVSQSETIKNMIEDGCADDHIPVPNVTGSILAKVLEYCKRHIVEPREDDEEG 39
           E F++EE V  +S+TIK+MIEDGCAD+ IP+PNVT  ILAKV+EYCK+H+  P+ ++   
Sbjct: 15  EAFDLEEVVAVESQTIKHMIEDGCADNAIPLPNVTSKILAKVIEYCKKHVETPKAEEHAV 74

Query: 38  KRELKQWDAEFV 3
             ELK WDA+FV
Sbjct: 75  NDELKAWDADFV 86


>dbj|BAJ53099.1| JHL20J20.6 [Jatropha curcas]
          Length = 100

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/74 (59%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = -2

Query: 218 EVFEVEEAVVSQSETIKNMIEDGCADDHIPVPNVTGSILAKVLEYCKRHIVEPREDD--E 45
           E FEV+EAV  +S+TIK+MIED CAD+ IP+PNVT  IL+KV+EYCK+H+  P+ DD   
Sbjct: 15  ETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVETPKSDDRPS 74

Query: 44  EGKRELKQWDAEFV 3
               ELK WDA+FV
Sbjct: 75  SADEELKTWDADFV 88


>ref|NP_001241052.1| uncharacterized protein LOC100798104 [Glycine max]
           gi|255641709|gb|ACU21125.1| unknown [Glycine max]
          Length = 155

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/72 (61%), Positives = 55/72 (76%)
 Frame = -2

Query: 218 EVFEVEEAVVSQSETIKNMIEDGCADDHIPVPNVTGSILAKVLEYCKRHIVEPREDDEEG 39
           E FEVEEAV  +S+TIK+MIED CAD  IP+PNVT  ILAKV+EYCK+H+     D++  
Sbjct: 15  EAFEVEEAVAVESQTIKHMIEDNCADSGIPLPNVTSKILAKVIEYCKKHVEANCADEKPS 74

Query: 38  KRELKQWDAEFV 3
           + ELK WDA+FV
Sbjct: 75  EDELKAWDADFV 86


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