BLASTX nr result

ID: Cimicifuga21_contig00005994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005994
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine...   116   2e-24
gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like s...   105   5e-21
ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinas...   105   5e-21
sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like...   105   5e-21
ref|NP_001117479.1| Leucine-rich repeat transmembrane protein ki...   105   5e-21

>ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g53440-like [Cucumis sativus]
           gi|449521066|ref|XP_004167552.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g53440-like [Cucumis sativus]
          Length = 1012

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/108 (55%), Positives = 75/108 (69%), Gaps = 1/108 (0%)
 Frame = -3

Query: 325 FINCGGPMLPFEGQQYEPDSNNMRESSF-SYNDRWGCSSTGDFLGNEDALYKTPPSANIE 149
           FINCGG  +  +G  YE D     +S+F S++DRW  SSTG FLG+E+A Y+   S N  
Sbjct: 411 FINCGGQRMEVDGNDYEEDVTPGGKSNFLSFSDRWAYSSTGVFLGDENANYRAT-STNSS 469

Query: 148 SGSIYSTGRLAPISLKYYGLCLRQGSYNVTLHFAETMLTADQANNTRG 5
             +IY T RLAP+SLKYYGLCLR+GSYNV LHFAE M T+DQ  ++ G
Sbjct: 470 IPNIYQTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTSDQTFSSLG 517


>gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like serine/threonine kinase from
           Arabidopsis thaliana gb|AF024648 and contains multiple
           leucine rich PF|00560 repeats and protein kinase
           PF|00069 domain. ESTs gb|T04455, gb|N38129 come from
           this gene [Arabidopsis thaliana]
          Length = 942

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
 Frame = -3

Query: 325 FINCGGPMLPFEGQQYEPDSNNMRESSFS-YNDRWGCSSTGDFLGNEDALYKTPPSANIE 149
           FINCGG  L      Y  D N+  +S+FS  ++RWG SS+G +LG EDA Y      N+ 
Sbjct: 315 FINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGVWLGKEDAGYLATDRFNLI 374

Query: 148 SGSI---YSTGRLAPISLKYYGLCLRQGSYNVTLHFAETMLTADQANNTRGR 2
           +GS    Y T RL+P SLKYYGLCLR+GSY + LHFAE M + DQ  N+ GR
Sbjct: 375 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGR 426


>ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis
           thaliana] gi|332194818|gb|AEE32939.1| Leucine-rich
           repeat transmembrane protein kinase [Arabidopsis
           thaliana]
          Length = 1030

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
 Frame = -3

Query: 325 FINCGGPMLPFEGQQYEPDSNNMRESSFS-YNDRWGCSSTGDFLGNEDALYKTPPSANIE 149
           FINCGG  L      Y  D N+  +S+FS  ++RWG SS+G +LG EDA Y      N+ 
Sbjct: 403 FINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGVWLGKEDAGYLATDRFNLI 462

Query: 148 SGSI---YSTGRLAPISLKYYGLCLRQGSYNVTLHFAETMLTADQANNTRGR 2
           +GS    Y T RL+P SLKYYGLCLR+GSY + LHFAE M + DQ  N+ GR
Sbjct: 463 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGR 514


>sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein
           kinase At1g53430; Flags: Precursor
           gi|224589438|gb|ACN59253.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
          Length = 1038

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
 Frame = -3

Query: 325 FINCGGPMLPFEGQQYEPDSNNMRESSFS-YNDRWGCSSTGDFLGNEDALYKTPPSANIE 149
           FINCGG  L      Y  D N+  +S+FS  ++RWG SS+G +LG EDA Y      N+ 
Sbjct: 411 FINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGVWLGKEDAGYLATDRFNLI 470

Query: 148 SGSI---YSTGRLAPISLKYYGLCLRQGSYNVTLHFAETMLTADQANNTRGR 2
           +GS    Y T RL+P SLKYYGLCLR+GSY + LHFAE M + DQ  N+ GR
Sbjct: 471 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGR 522


>ref|NP_001117479.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis
           thaliana] gi|332194819|gb|AEE32940.1| Leucine-rich
           repeat transmembrane protein kinase [Arabidopsis
           thaliana]
          Length = 997

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 4/112 (3%)
 Frame = -3

Query: 325 FINCGGPMLPFEGQQYEPDSNNMRESSFS-YNDRWGCSSTGDFLGNEDALYKTPPSANIE 149
           FINCGG  L      Y  D N+  +S+FS  ++RWG SS+G +LG EDA Y      N+ 
Sbjct: 370 FINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGVWLGKEDAGYLATDRFNLI 429

Query: 148 SGSI---YSTGRLAPISLKYYGLCLRQGSYNVTLHFAETMLTADQANNTRGR 2
           +GS    Y T RL+P SLKYYGLCLR+GSY + LHFAE M + DQ  N+ GR
Sbjct: 430 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGR 481


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