BLASTX nr result
ID: Cimicifuga21_contig00005994
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00005994 (327 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine... 116 2e-24 gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like s... 105 5e-21 ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinas... 105 5e-21 sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like... 105 5e-21 ref|NP_001117479.1| Leucine-rich repeat transmembrane protein ki... 105 5e-21 >ref|XP_004146083.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440-like [Cucumis sativus] gi|449521066|ref|XP_004167552.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440-like [Cucumis sativus] Length = 1012 Score = 116 bits (290), Expect = 2e-24 Identities = 60/108 (55%), Positives = 75/108 (69%), Gaps = 1/108 (0%) Frame = -3 Query: 325 FINCGGPMLPFEGQQYEPDSNNMRESSF-SYNDRWGCSSTGDFLGNEDALYKTPPSANIE 149 FINCGG + +G YE D +S+F S++DRW SSTG FLG+E+A Y+ S N Sbjct: 411 FINCGGQRMEVDGNDYEEDVTPGGKSNFLSFSDRWAYSSTGVFLGDENANYRAT-STNSS 469 Query: 148 SGSIYSTGRLAPISLKYYGLCLRQGSYNVTLHFAETMLTADQANNTRG 5 +IY T RLAP+SLKYYGLCLR+GSYNV LHFAE M T+DQ ++ G Sbjct: 470 IPNIYQTARLAPLSLKYYGLCLRRGSYNVKLHFAEIMYTSDQTFSSLG 517 >gb|AAF78446.1|AC018748_25 Contains similarity to receptor-like serine/threonine kinase from Arabidopsis thaliana gb|AF024648 and contains multiple leucine rich PF|00560 repeats and protein kinase PF|00069 domain. ESTs gb|T04455, gb|N38129 come from this gene [Arabidopsis thaliana] Length = 942 Score = 105 bits (261), Expect = 5e-21 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 4/112 (3%) Frame = -3 Query: 325 FINCGGPMLPFEGQQYEPDSNNMRESSFS-YNDRWGCSSTGDFLGNEDALYKTPPSANIE 149 FINCGG L Y D N+ +S+FS ++RWG SS+G +LG EDA Y N+ Sbjct: 315 FINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGVWLGKEDAGYLATDRFNLI 374 Query: 148 SGSI---YSTGRLAPISLKYYGLCLRQGSYNVTLHFAETMLTADQANNTRGR 2 +GS Y T RL+P SLKYYGLCLR+GSY + LHFAE M + DQ N+ GR Sbjct: 375 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGR 426 >ref|NP_175748.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|332194818|gb|AEE32939.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] Length = 1030 Score = 105 bits (261), Expect = 5e-21 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 4/112 (3%) Frame = -3 Query: 325 FINCGGPMLPFEGQQYEPDSNNMRESSFS-YNDRWGCSSTGDFLGNEDALYKTPPSANIE 149 FINCGG L Y D N+ +S+FS ++RWG SS+G +LG EDA Y N+ Sbjct: 403 FINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGVWLGKEDAGYLATDRFNLI 462 Query: 148 SGSI---YSTGRLAPISLKYYGLCLRQGSYNVTLHFAETMLTADQANNTRGR 2 +GS Y T RL+P SLKYYGLCLR+GSY + LHFAE M + DQ N+ GR Sbjct: 463 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGR 514 >sp|C0LGG8.1|Y5343_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g53430; Flags: Precursor gi|224589438|gb|ACN59253.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] Length = 1038 Score = 105 bits (261), Expect = 5e-21 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 4/112 (3%) Frame = -3 Query: 325 FINCGGPMLPFEGQQYEPDSNNMRESSFS-YNDRWGCSSTGDFLGNEDALYKTPPSANIE 149 FINCGG L Y D N+ +S+FS ++RWG SS+G +LG EDA Y N+ Sbjct: 411 FINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGVWLGKEDAGYLATDRFNLI 470 Query: 148 SGSI---YSTGRLAPISLKYYGLCLRQGSYNVTLHFAETMLTADQANNTRGR 2 +GS Y T RL+P SLKYYGLCLR+GSY + LHFAE M + DQ N+ GR Sbjct: 471 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGR 522 >ref|NP_001117479.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] gi|332194819|gb|AEE32940.1| Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana] Length = 997 Score = 105 bits (261), Expect = 5e-21 Identities = 57/112 (50%), Positives = 71/112 (63%), Gaps = 4/112 (3%) Frame = -3 Query: 325 FINCGGPMLPFEGQQYEPDSNNMRESSFS-YNDRWGCSSTGDFLGNEDALYKTPPSANIE 149 FINCGG L Y D N+ +S+FS ++RWG SS+G +LG EDA Y N+ Sbjct: 370 FINCGGSRLKIGKDTYTDDLNSRGQSTFSSVSERWGYSSSGVWLGKEDAGYLATDRFNLI 429 Query: 148 SGSI---YSTGRLAPISLKYYGLCLRQGSYNVTLHFAETMLTADQANNTRGR 2 +GS Y T RL+P SLKYYGLCLR+GSY + LHFAE M + DQ N+ GR Sbjct: 430 NGSTPEYYKTARLSPQSLKYYGLCLRRGSYKLQLHFAEIMFSNDQTFNSLGR 481