BLASTX nr result

ID: Cimicifuga21_contig00005989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005989
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632712.1| PREDICTED: uncharacterized protein LOC100854...    75   4e-12
emb|CBI30582.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_001761944.1| predicted protein [Physcomitrella patens sub...    59   5e-07
ref|XP_003541388.1| PREDICTED: uncharacterized protein LOC100790...    57   2e-06
ref|XP_002438826.1| hypothetical protein SORBIDRAFT_10g026795 [S...    57   2e-06

>ref|XP_003632712.1| PREDICTED: uncharacterized protein LOC100854566 [Vitis vinifera]
          Length = 290

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/88 (45%), Positives = 58/88 (65%)
 Frame = -1

Query: 477 TKRRLEYTTDVNSTPITKDRKKNLSFLPPEESNCKRSRSGRLIVPPLDYWRNEQILYDKD 298
           TKR+L+Y   V   P  K+R + +S + PE  + KRSRSGRL++P LD+WRN++ +YD D
Sbjct: 202 TKRKLDYNIQVTH-PSIKERTE-VSIVSPELLSLKRSRSGRLLLPSLDFWRNQKAVYDAD 259

Query: 297 RGIVGVLNGLPVEEYCTGSKSKPSRKKK 214
           R I G+   L V E   GS+S+P  K++
Sbjct: 260 RRITGIQEVLHVVEPSRGSRSEPQGKQR 287


>emb|CBI30582.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/74 (47%), Positives = 49/74 (66%)
 Frame = -1

Query: 477 TKRRLEYTTDVNSTPITKDRKKNLSFLPPEESNCKRSRSGRLIVPPLDYWRNEQILYDKD 298
           TKR+L+Y   V   P  K+R + +S + PE  + KRSRSGRL++P LD+WRN++ +YD D
Sbjct: 375 TKRKLDYNIQVTH-PSIKERTE-VSIVSPELLSLKRSRSGRLLLPSLDFWRNQKAVYDAD 432

Query: 297 RGIVGVLNGLPVEE 256
           R I G+   L V E
Sbjct: 433 RRITGIQEVLHVVE 446


>ref|XP_001761944.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162686999|gb|EDQ73385.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 1232

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
 Frame = -1

Query: 477  TKRRLEYTTDVNSTPITKDRKKN-LSFLPPEESNCKRSRSGRLIVPPLDYWRNEQILYDK 301
            + +R    T +   P+   R +N L    PE    K SRSGRL+VPPL YWR++ I YDK
Sbjct: 1161 SSKRNNRRTSIIPPPLPPPRVENGLKSKVPEAFGLKTSRSGRLLVPPLAYWRSQTIEYDK 1220

Query: 300  DRGIVGVLNG 271
            D GI+ + +G
Sbjct: 1221 DGGIIAIFDG 1230


>ref|XP_003541388.1| PREDICTED: uncharacterized protein LOC100790080 [Glycine max]
          Length = 741

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/72 (34%), Positives = 43/72 (59%)
 Frame = -1

Query: 438 TPITKDRKKNLSFLPPEESNCKRSRSGRLIVPPLDYWRNEQILYDKDRGIVGVLNGLPVE 259
           +P+ K  ++ +S   PE  + ++SRSGRL++PPL++WRN+  +Y+ D  I  + +G  + 
Sbjct: 662 SPLAKGSQQKISTFTPESLSFRKSRSGRLLLPPLEFWRNQIPIYNADHEITEIRDGASLI 721

Query: 258 EYCTGSKSKPSR 223
             C G     SR
Sbjct: 722 SPCRGFSPSLSR 733


>ref|XP_002438826.1| hypothetical protein SORBIDRAFT_10g026795 [Sorghum bicolor]
           gi|241917049|gb|EER90193.1| hypothetical protein
           SORBIDRAFT_10g026795 [Sorghum bicolor]
          Length = 114

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
 Frame = -1

Query: 438 TPITKDRKKNLSFLPPEESNCKRSRSGRLIVPPLDYWRNEQILYDKDRGIVGVLNGLPVE 259
           +P+T+D+  +LS   PE+   KRSRSGR+IVP LD W  + I+Y +D G++  + GL   
Sbjct: 40  SPLTRDKATSLSMSTPEDLELKRSRSGRVIVPKLDNW-CQTIVYGRD-GLIAAVIGLDSP 97

Query: 258 EY-CTGSKSKPSRKKK 214
               +GS+SK  R+KK
Sbjct: 98  ALPKSGSESKTDRRKK 113


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