BLASTX nr result

ID: Cimicifuga21_contig00005886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005886
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149471.1| PREDICTED: uncharacterized protein At4g15970...   131   6e-29
ref|XP_004171323.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   130   1e-28
ref|XP_002521882.1| pentatricopeptide repeat-containing protein,...   128   5e-28
gb|ACQ90601.1| putative Myb DNA binding protein [Eutrema halophi...   127   9e-28
dbj|BAK07650.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   1e-27

>ref|XP_004149471.1| PREDICTED: uncharacterized protein At4g15970-like [Cucumis sativus]
          Length = 350

 Score =  131 bits (329), Expect = 6e-29
 Identities = 58/86 (67%), Positives = 69/86 (80%)
 Frame = +3

Query: 3   AFVRCKSVHTHCFFLSTPGVNFSSEKRFMSPDYLKLMWRRIDFLRVVLELGYNFVFTDAD 182
           AF+RC  +H HC  L T GV+F SE  FMSPDYLK+MWRRIDFLR VLE+GYNFVFTDAD
Sbjct: 132 AFMRCLDIHIHCVSLVTEGVDFRSEAYFMSPDYLKMMWRRIDFLRTVLEMGYNFVFTDAD 191

Query: 183 IMWFREPFRYFNNVSEIQIACDIYKG 260
           +MWFR+PF +F+  ++ QIACD Y G
Sbjct: 192 VMWFRDPFPFFDINADFQIACDQYLG 217


>ref|XP_004171323.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At4g15970-like [Cucumis sativus]
          Length = 350

 Score =  130 bits (326), Expect = 1e-28
 Identities = 57/86 (66%), Positives = 69/86 (80%)
 Frame = +3

Query: 3   AFVRCKSVHTHCFFLSTPGVNFSSEKRFMSPDYLKLMWRRIDFLRVVLELGYNFVFTDAD 182
           AF+RC  +H HC  L T GV+F SE  +MSPDYLK+MWRRIDFLR VLE+GYNFVFTDAD
Sbjct: 132 AFMRCLDIHIHCVSLVTEGVDFRSEAYYMSPDYLKMMWRRIDFLRTVLEMGYNFVFTDAD 191

Query: 183 IMWFREPFRYFNNVSEIQIACDIYKG 260
           +MWFR+PF +F+  ++ QIACD Y G
Sbjct: 192 VMWFRDPFPFFDINADFQIACDQYLG 217


>ref|XP_002521882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538920|gb|EEF40518.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 394

 Score =  128 bits (321), Expect = 5e-28
 Identities = 59/93 (63%), Positives = 71/93 (76%)
 Frame = +3

Query: 3   AFVRCKSVHTHCFFLSTPGVNFSSEKRFMSPDYLKLMWRRIDFLRVVLELGYNFVFTDAD 182
           A  RC  VH HCF L T G++FS+E  FM+P YLK+MWRRIDFLR VLE+GYNFVFTDAD
Sbjct: 159 ANARCIQVHDHCFALLTDGIDFSNEAYFMTPAYLKMMWRRIDFLRSVLEMGYNFVFTDAD 218

Query: 183 IMWFREPFRYFNNVSEIQIACDIYKGNSTNKRN 281
           IMWFR+PF  F + ++ QIACD + G+S N  N
Sbjct: 219 IMWFRDPFPRFYSDADFQIACDHFTGSSINIHN 251


>gb|ACQ90601.1| putative Myb DNA binding protein [Eutrema halophilum]
          Length = 397

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/93 (61%), Positives = 69/93 (74%)
 Frame = +3

Query: 3   AFVRCKSVHTHCFFLSTPGVNFSSEKRFMSPDYLKLMWRRIDFLRVVLELGYNFVFTDAD 182
           A+ RC+ +H HCF L T GV+FS E  FM+  YLK+MWRRIDFLR VLE+GYNFVFTDAD
Sbjct: 157 AYSRCRELHKHCFSLETEGVDFSGEAYFMTRSYLKMMWRRIDFLRSVLEMGYNFVFTDAD 216

Query: 183 IMWFREPFRYFNNVSEIQIACDIYKGNSTNKRN 281
           +MWFR PF  F   ++ QIACD Y G S + +N
Sbjct: 217 VMWFRNPFPRFYRSADFQIACDHYLGRSNDLQN 249


>dbj|BAK07650.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 390

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/93 (59%), Positives = 72/93 (77%)
 Frame = +3

Query: 3   AFVRCKSVHTHCFFLSTPGVNFSSEKRFMSPDYLKLMWRRIDFLRVVLELGYNFVFTDAD 182
           A+ RC  VHT+C+ L T  V+FS EKRF++  YL++MW+R+DFLR+VLE GY+F+F+DAD
Sbjct: 167 AYKRCTEVHTYCYALVTDNVDFSQEKRFLTAGYLEMMWKRLDFLRLVLEKGYSFIFSDAD 226

Query: 183 IMWFREPFRYFNNVSEIQIACDIYKGNSTNKRN 281
           IMWFR PF YF    + Q+ACD Y GNST+ RN
Sbjct: 227 IMWFRNPFPYFYPDGDFQVACDHYVGNSTDLRN 259


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