BLASTX nr result
ID: Cimicifuga21_contig00005884
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00005884 (1581 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi... 493 e-137 emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera] 493 e-137 ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi... 456 e-126 ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 456 e-125 ref|XP_002532584.1| pentatricopeptide repeat-containing protein,... 448 e-123 >ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like [Vitis vinifera] Length = 881 Score = 493 bits (1270), Expect = e-137 Identities = 266/473 (56%), Positives = 325/473 (68%), Gaps = 16/473 (3%) Frame = +3 Query: 210 RMLLSKTKAARFFFLSPILTSRTLILYSSSFSTLNSFYPSPTPQR-------------IV 350 R LS T R F + +L S S ST++ P+ P I Sbjct: 3 RTKLSSTNPPRVFRVLRVLG------VSISTSTVSPTTPASPPHNHLLPRHNPVVLGGIG 56 Query: 351 DFDSKEIALSFKNWFRSRDNTLL-DRIFEILGGKDDDELASQLNQLGLRLNEEFILKVLN 527 +K++ LSFK WF+S N LL D+IF IL D+ + L +L L L+E F+L VL Sbjct: 57 SLQAKDVVLSFKQWFKSPQNILLMDQIFRILSDLPPDDADAALGRLRLPLSERFVLDVLA 116 Query: 528 HGRDVLSCLKFFDWAGRQRGYIHTRATFNAIFKILSREKLMSLMLDFLETYKNQQLLHKV 707 HG DVLSCLKFFDWAGRQ G+ HTRATF+A FKIL+R KLMSLMLDFL+ Y + +H+V Sbjct: 117 HGSDVLSCLKFFDWAGRQPGFHHTRATFHATFKILARAKLMSLMLDFLQNYTELRYVHRV 176 Query: 708 RLHDTLVVGYAVAGKPDIALKLFGGMRFQGIDLDPFAYHVFLNALVEQSCFDVAEVVFKQ 887 R +DTLV+GYAVAGKP+IAL+LF MRFQG+DLD FAYHV LNALVE++CFD VV +Q Sbjct: 177 RFYDTLVMGYAVAGKPEIALQLFAKMRFQGLDLDSFAYHVLLNALVEENCFDAFRVVVEQ 236 Query: 888 IALRGFENEITSCIRVKNFCKQNKLNEAVGFLCGLESRGQV--ITDRMVGVLIDAHCKIK 1061 I +RG +NEIT I VKNFCKQ +L+EA F+ L G+V MVG+++DA CK K Sbjct: 237 IRMRGLDNEITHSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGHMVGLIVDALCKRK 296 Query: 1062 KFEEALRLMEDFWCLGKVALEHTYGIWTRGLVQSGKVDSALDFLRSKKLTEGYVPDRFRY 1241 +F EA RL+E+F G V++E YG+W R LV++G++D AL+FL SKK +EGYVP+ Y Sbjct: 297 RFGEAGRLVEEFQGSGMVSVEQAYGVWIRDLVRAGRLDGALEFLHSKKESEGYVPEVCGY 356 Query: 1242 NMLICRLLRENRLDDVCDLLMEMMEEKISPDKITMNAALCFFCKAGMVDVALEFYNSRSE 1421 N+LICRLLRENRL++V DLLMEM E +I PDK+TMNA LCFFCKAGMVDVALE YNSR+E Sbjct: 357 NILICRLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLCFFCKAGMVDVALELYNSRAE 416 Query: 1422 FGXXXXXXXXXXXXXTLCGDGSVDEAYGVLKDFIRQGYFPGKSASSILADALC 1580 FG TLCGDGS DEAY VLK + QGYFPGK SILADALC Sbjct: 417 FGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSLEQGYFPGKKTFSILADALC 469 Score = 67.0 bits (162), Expect = 1e-08 Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 1/260 (0%) Frame = +3 Query: 552 LKFFDWAGRQRGYIHTRATFNAIFKILSREKLMSLMLDFLETYKNQQLLHKVRLHDTLVV 731 L+F GY+ +N + L RE + +LD L + Q+L + ++ Sbjct: 337 LEFLHSKKESEGYVPEVCGYNILICRLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLC 396 Query: 732 GYAVAGKPDIALKLFGGMRFQGIDLDPFAYHVFLNALVEQSCFDVAEVVFKQIALRG-FE 908 + AG D+AL+L+ G+ + AY+ +N L D A V K +G F Sbjct: 397 FFCKAGMVDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSLEQGYFP 456 Query: 909 NEITSCIRVKNFCKQNKLNEAVGFLCGLESRGQVITDRMVGVLIDAHCKIKKFEEALRLM 1088 + T I C++ KL++ + R + + I A CK ++ ++ + Sbjct: 457 GKKTFSILADALCQEGKLDKMKELVLVALDRNIMPSASTYDKFILALCKARRVDDGYLIQ 516 Query: 1089 EDFWCLGKVALEHTYGIWTRGLVQSGKVDSALDFLRSKKLTEGYVPDRFRYNMLICRLLR 1268 + + KVA ++TY RG + D A L + +G+ P R + +ICRL Sbjct: 517 GELNKINKVASKNTYFNMIRGFNILNRADIAARLLIELQ-EKGHTPTRSLFRAVICRLC- 574 Query: 1269 ENRLDDVCDLLMEMMEEKIS 1328 +D+ ++++E ++S Sbjct: 575 --DMDNAEKQFLKLLELQLS 592 >emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera] Length = 1173 Score = 493 bits (1270), Expect = e-137 Identities = 266/473 (56%), Positives = 325/473 (68%), Gaps = 16/473 (3%) Frame = +3 Query: 210 RMLLSKTKAARFFFLSPILTSRTLILYSSSFSTLNSFYPSPTPQR-------------IV 350 R LS T R F + +L S S ST++ P+ P I Sbjct: 3 RTKLSSTNPPRVFRVLRVLG------VSISTSTVSPTTPASPPHNHLLPRHNPVVLGGIG 56 Query: 351 DFDSKEIALSFKNWFRSRDNTLL-DRIFEILGGKDDDELASQLNQLGLRLNEEFILKVLN 527 +K++ LSFK WF+S N LL D+IF IL D+ + L +L L L+E F+L VL Sbjct: 57 SLQAKDVVLSFKQWFKSPQNILLMDQIFRILSDLPPDDADAALGRLRLPLSERFVLDVLA 116 Query: 528 HGRDVLSCLKFFDWAGRQRGYIHTRATFNAIFKILSREKLMSLMLDFLETYKNQQLLHKV 707 HG DVLSCLKFFDWAGRQ G+ HTRATF+A FKIL+R KLMSLMLDFL+ Y + +H+V Sbjct: 117 HGSDVLSCLKFFDWAGRQPGFHHTRATFHATFKILARAKLMSLMLDFLQNYTELRYVHRV 176 Query: 708 RLHDTLVVGYAVAGKPDIALKLFGGMRFQGIDLDPFAYHVFLNALVEQSCFDVAEVVFKQ 887 R +DTLV+GYAVAGKP+IAL+LF MRFQG+DLD FAYHV LNALVE++CFD VV +Q Sbjct: 177 RFYDTLVMGYAVAGKPEIALQLFAKMRFQGLDLDSFAYHVLLNALVEENCFDAFRVVVEQ 236 Query: 888 IALRGFENEITSCIRVKNFCKQNKLNEAVGFLCGLESRGQV--ITDRMVGVLIDAHCKIK 1061 I +RG +NEIT I VKNFCKQ +L+EA F+ L G+V MVG+++DA CK K Sbjct: 237 IRMRGLDNEITHSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGHMVGLIVDALCKRK 296 Query: 1062 KFEEALRLMEDFWCLGKVALEHTYGIWTRGLVQSGKVDSALDFLRSKKLTEGYVPDRFRY 1241 +F EA RL+E+F G V++E YG+W R LV++G++D AL+FL SKK +EGYVP+ Y Sbjct: 297 RFGEAGRLVEEFQGSGMVSVEQAYGVWIRDLVRAGRLDGALEFLHSKKESEGYVPEVCGY 356 Query: 1242 NMLICRLLRENRLDDVCDLLMEMMEEKISPDKITMNAALCFFCKAGMVDVALEFYNSRSE 1421 N+LICRLLRENRL++V DLLMEM E +I PDK+TMNA LCFFCKAGMVDVALE YNSR+E Sbjct: 357 NILICRLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLCFFCKAGMVDVALELYNSRAE 416 Query: 1422 FGXXXXXXXXXXXXXTLCGDGSVDEAYGVLKDFIRQGYFPGKSASSILADALC 1580 FG TLCGDGS DEAY VLK + QGYFPGK SILADALC Sbjct: 417 FGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSLEQGYFPGKKTFSILADALC 469 Score = 67.0 bits (162), Expect = 1e-08 Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 1/260 (0%) Frame = +3 Query: 552 LKFFDWAGRQRGYIHTRATFNAIFKILSREKLMSLMLDFLETYKNQQLLHKVRLHDTLVV 731 L+F GY+ +N + L RE + +LD L + Q+L + ++ Sbjct: 337 LEFLHSKKESEGYVPEVCGYNILICRLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLC 396 Query: 732 GYAVAGKPDIALKLFGGMRFQGIDLDPFAYHVFLNALVEQSCFDVAEVVFKQIALRG-FE 908 + AG D+AL+L+ G+ + AY+ +N L D A V K +G F Sbjct: 397 FFCKAGMVDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSLEQGYFP 456 Query: 909 NEITSCIRVKNFCKQNKLNEAVGFLCGLESRGQVITDRMVGVLIDAHCKIKKFEEALRLM 1088 + T I C++ KL++ + R + + I A CK ++ ++ + Sbjct: 457 GKKTFSILADALCQEGKLDKMKELVLVALDRNIMPSASTYDKFILALCKARRVDDGYLIQ 516 Query: 1089 EDFWCLGKVALEHTYGIWTRGLVQSGKVDSALDFLRSKKLTEGYVPDRFRYNMLICRLLR 1268 + + KVA ++TY RG + D A L + +G+ P R + +ICRL Sbjct: 517 GELNKINKVASKNTYFNMIRGFNILNRADIAARLLIELQ-EKGHTPTRSLFRAVICRLC- 574 Query: 1269 ENRLDDVCDLLMEMMEEKIS 1328 +D+ ++++E ++S Sbjct: 575 --DMDNAEKQFLKLLELQLS 592 >ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like [Cucumis sativus] Length = 913 Score = 456 bits (1173), Expect = e-126 Identities = 237/416 (56%), Positives = 293/416 (70%), Gaps = 9/416 (2%) Frame = +3 Query: 360 SKEIALSFKNWFRSRDNTLLDRIFEIL-GGKDDDELASQ-------LNQLGLRLNEEFIL 515 +KE+A SFK WF+S N L +IF+IL G +DD E+ + L++LGLRLNE F+L Sbjct: 78 TKEVASSFKEWFKSGSNPLYGKIFQILRGARDDQEIPYRPSAADLALSRLGLRLNESFVL 137 Query: 516 KVLNHG-RDVLSCLKFFDWAGRQRGYIHTRATFNAIFKILSREKLMSLMLDFLETYKNQQ 692 VL G +DVLSCLKFFDWAGRQ + HTRATFNAI KILS+ KL+SLM DFLE + Sbjct: 138 DVLRFGSKDVLSCLKFFDWAGRQERFFHTRATFNAILKILSKAKLVSLMFDFLENCVQHK 197 Query: 693 LLHKVRLHDTLVVGYAVAGKPDIALKLFGGMRFQGIDLDPFAYHVFLNALVEQSCFDVAE 872 L H ++ LV+GYA AGKP AL LFG MRFQG+DLDPF+YHV LN+LVE++CFD Sbjct: 198 LYHMPCFYNILVMGYAAAGKPIFALHLFGKMRFQGLDLDPFSYHVLLNSLVEENCFDAVN 257 Query: 873 VVFKQIALRGFENEITSCIRVKNFCKQNKLNEAVGFLCGLESRGQVITDRMVGVLIDAHC 1052 V+ KQI LRGF NEIT + +K+FCKQN+L+EA FL L G+ + RM+ +L+ A C Sbjct: 258 VIIKQITLRGFVNEITHYLMLKSFCKQNQLDEAETFLHDLVDSGKKLNGRMLDLLVGAFC 317 Query: 1053 KIKKFEEALRLMEDFWCLGKVALEHTYGIWTRGLVQSGKVDSALDFLRSKKLTEGYVPDR 1232 + FE A +L+E F L V++EH YG+W L+++GK++SAL FL S KL Y+PD Sbjct: 318 QSGNFERAWKLVEWFRDLQIVSMEHVYGVWITELIRAGKLESALQFLNSSKLDGRYIPDV 377 Query: 1233 FRYNMLICRLLRENRLDDVCDLLMEMMEEKISPDKITMNAALCFFCKAGMVDVALEFYNS 1412 FRYNMLI RLLRENRL +V DLL EMM++ ISPDK+TM+AA+CF CKAGMV+VALE YNS Sbjct: 378 FRYNMLIHRLLRENRLQEVFDLLTEMMDQHISPDKVTMDAAMCFLCKAGMVEVALELYNS 437 Query: 1413 RSEFGXXXXXXXXXXXXXTLCGDGSVDEAYGVLKDFIRQGYFPGKSASSILADALC 1580 EFG LC DGS DEAY +LK I +GYFPGK SILA ALC Sbjct: 438 NFEFGISPNTMAYNYLINALCRDGSTDEAYRILKCSIYEGYFPGKKTFSILASALC 493 >ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g71210-like, partial [Cucumis sativus] Length = 889 Score = 456 bits (1172), Expect = e-125 Identities = 237/416 (56%), Positives = 293/416 (70%), Gaps = 9/416 (2%) Frame = +3 Query: 360 SKEIALSFKNWFRSRDNTLLDRIFEIL-GGKDDDELASQ-------LNQLGLRLNEEFIL 515 +KE+A SFK WF+S N L +IF+IL G +DD E+ + L++LGLRLNE F+L Sbjct: 54 TKEVASSFKEWFKSGSNPLYGKIFQILRGARDDQEIPYRPSAADLALSRLGLRLNESFVL 113 Query: 516 KVLNHG-RDVLSCLKFFDWAGRQRGYIHTRATFNAIFKILSREKLMSLMLDFLETYKNQQ 692 VL G +DVLSCLKFFDWAGRQ + HTRATFNAI KILS+ KL+SLM DFLE + Sbjct: 114 DVLRFGSKDVLSCLKFFDWAGRQERFFHTRATFNAILKILSKAKLVSLMFDFLENCVQHK 173 Query: 693 LLHKVRLHDTLVVGYAVAGKPDIALKLFGGMRFQGIDLDPFAYHVFLNALVEQSCFDVAE 872 L H ++ LV+GYA AGKP AL LFG MRFQG+DLDPF+YHV LN+LVE++CFD Sbjct: 174 LYHMPCFYNILVMGYAAAGKPIFALHLFGKMRFQGLDLDPFSYHVLLNSLVEENCFDAVN 233 Query: 873 VVFKQIALRGFENEITSCIRVKNFCKQNKLNEAVGFLCGLESRGQVITDRMVGVLIDAHC 1052 V+ KQI LRGF NEIT + +K+FCKQN+L+EA FL L G+ + RM+ +L+ A C Sbjct: 234 VIIKQITLRGFVNEITHYLMLKSFCKQNQLDEAETFLHDLVDSGKKLNGRMLDLLVGAFC 293 Query: 1053 KIKKFEEALRLMEDFWCLGKVALEHTYGIWTRGLVQSGKVDSALDFLRSKKLTEGYVPDR 1232 + FE A +L+E F L V++EH YG+W L+++GK++SAL FL S KL Y+PD Sbjct: 294 QSGNFERAWKLVEWFRDLQIVSMEHVYGVWITELIRAGKLESALQFLNSSKLDGRYIPDV 353 Query: 1233 FRYNMLICRLLRENRLDDVCDLLMEMMEEKISPDKITMNAALCFFCKAGMVDVALEFYNS 1412 FRYNMLI RLLRENRL +V DLL EMM++ ISPDK+TM+AA+CF CKAGMV+VALE YNS Sbjct: 354 FRYNMLIHRLLRENRLQEVFDLLTEMMDQHISPDKVTMDAAMCFLCKAGMVEVALELYNS 413 Query: 1413 RSEFGXXXXXXXXXXXXXTLCGDGSVDEAYGVLKDFIRQGYFPGKSASSILADALC 1580 EFG LC DGS DEAY +LK I +GYFPGK SILA ALC Sbjct: 414 NFEFGISPNTMAYNYLINALCRDGSTDEAYRILKCSIYEGYFPGKKXFSILASALC 469 >ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223527693|gb|EEF29801.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 895 Score = 448 bits (1152), Expect = e-123 Identities = 238/444 (53%), Positives = 308/444 (69%), Gaps = 7/444 (1%) Frame = +3 Query: 267 TSRTLILYSSSFSTLNSFYPSPTPQRIVDFDSKEIALSFKNWFRSRDNTLLDRIFEILGG 446 T + Y +STL++ P ++ K + SFK WF++++N LDR+FEIL Sbjct: 42 TRLPFLCYYHYYSTLSAI-PIQQINFHPNYTYKHVVQSFKEWFKTQNNGFLDRVFEILSN 100 Query: 447 KDD-DELASQLNQLGLRLNEEFILKVLNHG---RDVLSCLKFFDWAGRQRGYIHTRATFN 614 +D+ DELA L+QLGLRL E +L VL++G +DVLSCLKFFDWAGRQ G+ HTRATF+ Sbjct: 101 QDEVDELA--LSQLGLRLTESLVLDVLHYGNSKKDVLSCLKFFDWAGRQSGFYHTRATFH 158 Query: 615 AIFKILSREKLMSLMLDFLETY-KNQQLLHKVR--LHDTLVVGYAVAGKPDIALKLFGGM 785 AIFKILS+ KLM LMLDFL+ Y K++ HK+ + TL++GY+VAGKP +AL+LFG M Sbjct: 159 AIFKILSKAKLMQLMLDFLDNYMKHRFANHKLGYGFYSTLIMGYSVAGKPQVALQLFGKM 218 Query: 786 RFQGIDLDPFAYHVFLNALVEQSCFDVAEVVFKQIALRGFENEITSCIRVKNFCKQNKLN 965 RF G DLD FAYH+ LN+LVE+ CFD + + KQI++RGFE+ IT I VK+FCKQ L+ Sbjct: 219 RFLGRDLDAFAYHILLNSLVEECCFDAVDDIAKQISIRGFESHITHSIVVKSFCKQRMLD 278 Query: 966 EAVGFLCGLESRGQVITDRMVGVLIDAHCKIKKFEEALRLMEDFWCLGKVALEHTYGIWT 1145 EA +L + +G+ VG+L+ A C+ +FE+A +L+E+F L V L YG+W Sbjct: 279 EAEAYLRRMILQGESGNGAAVGILVGAFCQKGQFEKAGQLIEEFRELRVVPLYPAYGVWL 338 Query: 1146 RGLVQSGKVDSALDFLRSKKLTEGYVPDRFRYNMLICRLLRENRLDDVCDLLMEMMEEKI 1325 R LVQ GK+D ALDF + KK E YVP+ F YN L+CRLL+ENRL + CDLLMEMME+ Sbjct: 339 RNLVQKGKLDGALDFFQQKKTLESYVPEIFHYNALLCRLLKENRLTEACDLLMEMMEDGF 398 Query: 1326 SPDKITMNAALCFFCKAGMVDVALEFYNSRSEFGXXXXXXXXXXXXXTLCGDGSVDEAYG 1505 SPDK+TMNAAL FFCKAGMVDVAL+ YN +SEFG +LC +G+VD+AY Sbjct: 399 SPDKVTMNAALSFFCKAGMVDVALDLYNCKSEFGLSPSTMTCNYLINSLCREGNVDDAYH 458 Query: 1506 VLKDFIRQGYFPGKSASSILADAL 1577 VLK GYFPGK A S+L DAL Sbjct: 459 VLKSSSEHGYFPGKRAFSMLTDAL 482 Score = 60.8 bits (146), Expect = 9e-07 Identities = 76/338 (22%), Positives = 135/338 (39%), Gaps = 8/338 (2%) Frame = +3 Query: 576 RQRGYIHTRATFNAIFKILSREKLMSLMLDFLET----YKNQQLLHK---VRLHDTLVVG 734 + +G++ R F A+ + L +D ET Y + QL + ++++ + G Sbjct: 569 QDKGHLPARTLFRAVIRSLCE-------MDDPETRFFNYLDMQLSRRDPNCQIYNFFIDG 621 Query: 735 YAVAGKPDIALKLFGGMRFQGIDLDPFAYHVFLNALVEQSCFDVAEVVFKQIALRGFENE 914 A KPDIA K+F M+ GI+ + + L + ++ A F + R Sbjct: 622 AGHAKKPDIARKVFEMMQRSGIEPNQSTNILMLQSYLKSERISDALNFFDAVGQRRKIGR 681 Query: 915 ITSCIRVKNFCKQNKLNEAVGFLCGLESRGQVITDRMVGVLIDAHCKIKKFEEALRLMED 1094 V CK NK++ A+ F ++S G V + VLI C K++ A+ L+ D Sbjct: 682 KLYNTMVVGLCKVNKVDSALSFFLEMQSNGMVPSVECYEVLIMLLCSNKRYSTAITLITD 741 Query: 1095 FWCLGKVALEHTYGIWTRGLVQSGKVDSALD-FLRSKKLTEGYVPDRFRYNMLICRLLRE 1271 L K T I L+ S K D D +L+ +++ + +I Sbjct: 742 ---LEKFGRRVTSFIGNILLLHSLKSDELYDAWLQVREVQNETSLNLLILGQIIGAFAGR 798 Query: 1272 NRLDDVCDLLMEMMEEKISPDKITMNAALCFFCKAGMVDVALEFYNSRSEFGXXXXXXXX 1451 +L D L E++E+ D T N + + +D A E ++ + G Sbjct: 799 LKLSQQIDNLEEVIEQCFPLDLYTYNMLMRRLSMSN-IDHARELFDRICQKGYEPNHWTY 857 Query: 1452 XXXXXTLCGDGSVDEAYGVLKDFIRQGYFPGKSASSIL 1565 L +G + EA + + R+G+ P S++ Sbjct: 858 DILVHGLFKNGRIGEARRWVDEMFRKGFSPSGRTKSLM 895