BLASTX nr result
ID: Cimicifuga21_contig00005842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005842
(1780 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264817.2| PREDICTED: uncharacterized protein LOC100267... 370 e-100
ref|XP_004152189.1| PREDICTED: uncharacterized protein LOC101212... 336 1e-89
ref|XP_004167412.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 330 1e-87
ref|XP_002303830.1| predicted protein [Populus trichocarpa] gi|2... 309 1e-81
ref|NP_849914.1| S15/NS1, RNA-binding protein [Arabidopsis thali... 267 6e-69
>ref|XP_002264817.2| PREDICTED: uncharacterized protein LOC100267570 [Vitis vinifera]
Length = 443
Score = 370 bits (951), Expect = e-100
Identities = 229/456 (50%), Positives = 274/456 (60%), Gaps = 17/456 (3%)
Frame = -2
Query: 1758 AAMALQLRPKCIIFRNPSFVH-LFSSSSDNNDGEDKKDPP-----------SSPMSYYFN 1615
A+ ALQ+ P+ RNPSF+H +FSSSS +ND ++ P SS +S YFN
Sbjct: 2 ASRALQIAPRNRS-RNPSFIHRVFSSSSTSNDADNNTPSPPSSSSSSSSSSSSSLSSYFN 60
Query: 1614 DVKASLRQSSSPYRRLSQEPPQDMPSFSLSKPTKVASLDEIRKNLSEFRSRSAPP--LPD 1441
DVKASL+Q P R+ S PS S +K+ASL+EIRKNLSEFRSRS+ P P
Sbjct: 61 DVKASLKQPPQPPRKSSSLFSSSSPSSSPPLSSKIASLEEIRKNLSEFRSRSSVPNPSPS 120
Query: 1440 QKPSSSKTVSFQELYKRNVTEKGEDGSNTAASVGQFDTIRESLRQMRNITGNQNQSDRFK 1261
Q+ SSS +SFQELYKRNV K ED S FD IRESL+Q+R S +
Sbjct: 121 QQSSSSSPISFQELYKRNVIPKPEDSPKGKLS---FDAIRESLKQLR-------PSSSAE 170
Query: 1260 GGPDRTNNKVFDLKSFKDSLNITPNDPGVRSSNVVMGGSETP---SMFRKGSMSRPDAEP 1090
GG + V L +F+DSL + P D G S+VV+GGS+ S+F K R +AE
Sbjct: 171 GGQTKGKTDVLSLSAFQDSLRLRPVDSGATKSSVVIGGSDDALPMSVFGKDIRDRKEAES 230
Query: 1089 QYSRNDLLKAYNYDELGEKLRKLRPVDTKVGNNWFSXXXXXXXXXXXXXXXXXXXXXRNV 910
+ +K Y +ELG+KLR+LRP + FS
Sbjct: 231 TAMKTSFVKWYGPEELGKKLRELRPETG--AESCFSLKELNERLMKLREMEEKETESSIP 288
Query: 909 GFSFPDLRXXXXXXXXXXXXXXXXXXLQRLDILGHLGGTPNYMLAPPKEQLVEKFFHPDN 730
G SF DLR + LDILG LGGTP++MLAPPKE LVE++FHPDN
Sbjct: 289 GVSFKDLRESLVRLRMADDEKTKKSSSE-LDILGRLGGTPSFMLAPPKEHLVEQYFHPDN 347
Query: 729 MSSAEKLKLELRKVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVLHKKDKHSRKGLQEM 550
MSSAEKLK+EL+KVRDEFKMSESDCGS+RVQVAQLTTKIKHL+S LHKKDKHSRKGLQ M
Sbjct: 348 MSSAEKLKVELKKVRDEFKMSESDCGSARVQVAQLTTKIKHLNSALHKKDKHSRKGLQAM 407
Query: 549 VQXXXXXXXXXXRTDWDSYCFCLSKLGLRDNPDYKN 442
VQ RTDWDSYC LSKLGLRDNP+YKN
Sbjct: 408 VQRRKKLLKYLRRTDWDSYCLVLSKLGLRDNPNYKN 443
>ref|XP_004152189.1| PREDICTED: uncharacterized protein LOC101212028 [Cucumis sativus]
Length = 449
Score = 336 bits (862), Expect = 1e-89
Identities = 220/465 (47%), Positives = 271/465 (58%), Gaps = 29/465 (6%)
Frame = -2
Query: 1752 MALQL--RPKCI-IFRNPSFVHLFSSSS----DNND--GEDKKDPPSSPMSYYFNDVKAS 1600
MALQL +PK NPS +HLFSS+S D ND + P S +S Y +DV+A
Sbjct: 1 MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR 60
Query: 1599 LRQ----SSSPYRRLSQEPPQDMPSFSLSKPTKVASLDEIRKNLSEFRSRSAPPLPDQ-- 1438
L+Q SSSP R + + S S +K ASL+EIRKNLSEFR+RS+ P P
Sbjct: 61 LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG 120
Query: 1437 -KPSSSKT----VSFQELYKRNVTEKGEDGSNTAAS------VGQ-FDTIRESLRQMRNI 1294
PSSS + +SFQ+LYK N KGED ++ A+ +G FD+I+ESLR++ +
Sbjct: 121 STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA 180
Query: 1293 TGNQNQSDRFKGGPDRTNNKVFDLKSFKDSLNITPNDPGVRSSNVVMGGSET--PSMFRK 1120
G Q++ K G L +FKDSL + P+DP VMGG+E S+F K
Sbjct: 181 RGMQSE---LKSGDS------LSLSAFKDSLKLKPSDP-------VMGGTERLPVSVFGK 224
Query: 1119 GSMSRPDAEPQYSRNDLLKAYNYDELGEKLRKLRPVDTKVGNNWFSXXXXXXXXXXXXXX 940
+ D + + + +K Y+YDELG KLR LRP D + G NWFS
Sbjct: 225 EMKEKKDGKNVGLKTEFVKMYSYDELGNKLRNLRP-DKEKGKNWFSLTELNDRLVKLRTM 283
Query: 939 XXXXXXXRNVGFSFPDLRXXXXXXXXXXXXXXXXXXLQRLDILGHLGGTPNYMLAPPKEQ 760
R G SF DLR LQRLDI+G L TPNYML PP E
Sbjct: 284 EEKETESRIGGISFQDLRASLMQMKISDDEREKKATLQRLDIMGQLVRTPNYMLEPPNEH 343
Query: 759 LVEKFFHPDNMSSAEKLKLELRKVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVLHKKD 580
LVEK+FHPDNMSSAEK+K+EL KVR++FKMSESDCGS+RVQVAQLTTKI HL++VLHKKD
Sbjct: 344 LVEKYFHPDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKKD 403
Query: 579 KHSRKGLQEMVQXXXXXXXXXXRTDWDSYCFCLSKLGLRDNPDYK 445
KHS+KGL MVQ RTDWDSYC L+ LGLRDNPDYK
Sbjct: 404 KHSKKGLLGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDYK 448
>ref|XP_004167412.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101229401
[Cucumis sativus]
Length = 449
Score = 330 bits (845), Expect = 1e-87
Identities = 220/466 (47%), Positives = 271/466 (58%), Gaps = 30/466 (6%)
Frame = -2
Query: 1752 MALQL--RPKCI-IFRNPSFVHLFSSSS----DNND--GEDKKDPPSSPMSYYFNDVKAS 1600
MALQL +PK NPS +HLFSS+S D ND + P S +S Y +DV+A
Sbjct: 1 MALQLTFKPKTPKTLTNPSLIHLFSSNSSAPSDPNDETADTSTASPRSSISSYLSDVRAR 60
Query: 1599 LRQ----SSSPYRRLSQEPPQDMPSFSLSKPTKVASLDEIRKNLSEFRSRSAPPLPDQ-- 1438
L+Q SSSP R + + S S +K ASL+EIRKNLSEFR+RS+ P P
Sbjct: 61 LKQDQQFSSSPSARRPADSFTSPFNRSTSPASKAASLEEIRKNLSEFRNRSSVPPPSDLG 120
Query: 1437 -KPSSSKT----VSFQELYKRNVTEKGEDGSNTAAS------VGQ-FDTIRESLRQMRNI 1294
PSSS + +SFQ+LYK N KGED ++ A+ +G FD+I+ESLR++ +
Sbjct: 121 STPSSSSSWQRGISFQDLYKNNSMRKGEDSNDAPANSTGGGRIGMPFDSIKESLRKVSSA 180
Query: 1293 TGNQNQSDRFKGGPDRTNNKVFDLKSFKDSLNITPNDPGVRSSNVVMGGSET--PSMFRK 1120
G Q++ K G L +FKDSL + P+DP VMGG+E S+F K
Sbjct: 181 RGMQSE---LKSGDS------LSLSAFKDSLKLKPSDP-------VMGGTERLPVSVFGK 224
Query: 1119 GSMSRPDAEPQYSRNDLLKAYNYDELGEKLRKLRPVDTKVGNNWFSXXXXXXXXXXXXXX 940
M D + + + +K Y+YDELG KLR LRP D + G NWFS
Sbjct: 225 -EMKEKDGKNVGLKTEFVKMYSYDELGNKLRNLRP-DKEKGKNWFSLTELNDRLVKLRTM 282
Query: 939 XXXXXXXRNVGFSFPDLRXXXXXXXXXXXXXXXXXXL-QRLDILGHLGGTPNYMLAPPKE 763
R G SF DLR + QRLDI+G L TPNYML PP E
Sbjct: 283 EEKETESRIGGISFQDLRASLMQMKISDDEREKKRHVIQRLDIMGQLVRTPNYMLEPPNE 342
Query: 762 QLVEKFFHPDNMSSAEKLKLELRKVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVLHKK 583
LVEK+FHPDNMSSAEK+K+EL KVR++FKMSESDCGS+RVQVAQLTTKI HL++VLHKK
Sbjct: 343 HLVEKYFHPDNMSSAEKMKIELAKVREKFKMSESDCGSARVQVAQLTTKINHLTAVLHKK 402
Query: 582 DKHSRKGLQEMVQXXXXXXXXXXRTDWDSYCFCLSKLGLRDNPDYK 445
DKHS+KGL MVQ RTDWDSYC L+ LGLRDNPDYK
Sbjct: 403 DKHSKKGLLGMVQQRKKLLKYLRRTDWDSYCMILNTLGLRDNPDYK 448
>ref|XP_002303830.1| predicted protein [Populus trichocarpa] gi|222841262|gb|EEE78809.1|
predicted protein [Populus trichocarpa]
Length = 470
Score = 309 bits (792), Expect = 1e-81
Identities = 211/477 (44%), Positives = 257/477 (53%), Gaps = 41/477 (8%)
Frame = -2
Query: 1752 MALQL-RPKCIIFRNPSFVHLFSSSSDNNDGEDKKDPPS----------------SPMSY 1624
MAL L RP+ NP +HLFSSSS + P S +S
Sbjct: 1 MALSLSRPRHRSLSNPYLIHLFSSSSTTPSDDPSVSEPQQQQQQQQQQQQQQQQKSSLSS 60
Query: 1623 YFNDVKASLRQSSSPYRRLSQEPPQDMPSFS----LSKPTK-VASLDEIRKNLSEFRSRS 1459
YFNDVKASL+Q + R S PP PS+S SKPT +AS DEIRKNLSEFR RS
Sbjct: 61 YFNDVKASLKQQNPENRPNS--PPLSKPSYSTNQSFSKPTSNIASFDEIRKNLSEFRLRS 118
Query: 1458 APP-------LPDQKPSSSKTVSFQELYKRNVTEKGEDGSNTAASVG-----------QF 1333
+ P P Q+PSS + +SFQELYKRNV + GS T S G F
Sbjct: 119 SDPPPREPNSAPSQEPSSKQQISFQELYKRNVLARSTGGSGTTQSGGINANQPISGRLTF 178
Query: 1332 DTIRESLRQMRNITGNQNQSDRFKGGPDRTNNKVFDLKSFKDSLNITPNDPGVRSSNVVM 1153
D IRESLRQM+ G+ N + +G + F LK + N+P +S+ ++
Sbjct: 179 DAIRESLRQMKG-GGDNNNTAAGRGRVGELSFSSFKLKPGNE------NEPMNKST--II 229
Query: 1152 GGSE-TPSMFRKGSMSRPDAEPQYSRNDLLKAYNYDELGEKLRKLRPVDTKVGNNWFSXX 976
GG+E PS M + +K Y++ ELG+KLR LRP + WF+
Sbjct: 230 GGTEGLPSAVFGREMEGEGGAKGEMSTEFVKMYSHGELGDKLRILRPKVKRGEKGWFTLK 289
Query: 975 XXXXXXXXXXXXXXXXXXXRNVGFSFPDLRXXXXXXXXXXXXXXXXXXLQRLDILGHLGG 796
R G SF DLR +QRL+++G L
Sbjct: 290 ELNERLRKLREMEEKETESRISGVSFRDLRESLVKLKASSDEKAIKNSVQRLNLMGQLRA 349
Query: 795 TPNYMLAPPKEQLVEKFFHPDNMSSAEKLKLELRKVRDEFKMSESDCGSSRVQVAQLTTK 616
+ N L PPK+ LVEK+FHPDNMSS+EK+K+EL +VRDEFKMSESDCGS+RVQVA LTTK
Sbjct: 350 S-NVTLQPPKKHLVEKYFHPDNMSSSEKMKIELARVRDEFKMSESDCGSARVQVALLTTK 408
Query: 615 IKHLSSVLHKKDKHSRKGLQEMVQXXXXXXXXXXRTDWDSYCFCLSKLGLRDNPDYK 445
IKHLSSVL+KKDKHSRKGL MVQ RTDWDSYC LSKLGLRDNPD+K
Sbjct: 409 IKHLSSVLNKKDKHSRKGLIGMVQKRKKLLKYLRRTDWDSYCLVLSKLGLRDNPDHK 465
>ref|NP_849914.1| S15/NS1, RNA-binding protein [Arabidopsis thaliana]
gi|6730725|gb|AAF27115.1|AC018849_3 unknown protein;
13226-11448 [Arabidopsis thaliana]
gi|332198307|gb|AEE36428.1| S15/NS1, RNA-binding protein
[Arabidopsis thaliana]
Length = 414
Score = 267 bits (683), Expect = 6e-69
Identities = 180/448 (40%), Positives = 233/448 (52%), Gaps = 12/448 (2%)
Frame = -2
Query: 1752 MALQL-RPKCIIFRNPSFVHLFSSSSDNN-----DGEDKKDPPSSP-----MSYYFNDVK 1606
MAL L RPK + NPS +HLFS+SS ++ DG + + PS +S YF+ ++
Sbjct: 1 MALHLARPKQRLHSNPSLIHLFSTSSSSSSSSPQDGNESNEQPSQSSSDYKISSYFSGIR 60
Query: 1605 ASLRQSSSPYRRLSQEPPQDMPSFSLSKPTKVASLDEIRKNLSEFRSRSAPPLPDQKPSS 1426
+SL+Q+ S Q+ + F ++ +IR+NL+EFRSR+ P P
Sbjct: 61 SSLKQTQS------QDGKRQFVRFDAKPQNSLSGNQDIRRNLNEFRSRATAPPPRD---- 110
Query: 1425 SKTVSFQELYKRNVTEKGEDGSNTAASVGQFDTIRESLRQMRNITGNQNQSDRFKGGPDR 1246
Q+L+K+NV K G I+ +LRQMR
Sbjct: 111 -----MQDLFKQNVLSKS--GGTRRIEGVPLTNIKANLRQMRPQQAT------------- 150
Query: 1245 TNNKVFDLKSFKDSLNITPNDPGVRSSNVVMGGSE-TPSMFRKGSMSRPDAEPQYSRNDL 1069
T +K +L ++ + ND +RS NV+ G +E P + D + +++
Sbjct: 151 TESKWANLSGIQNIMKTNIND-NIRS-NVIGGAAEGLPHSVVGKELEEEDVTEEEMKSEF 208
Query: 1068 LKAYNYDELGEKLRKLRPVDTKVGNNWFSXXXXXXXXXXXXXXXXXXXXXRNVGFSFPDL 889
+K+Y+ ELGEKLR RP + K WFS ++ P
Sbjct: 209 IKSYDPIELGEKLRLYRP-EGKKEEGWFSLQELNQRLVKLRAMEEEQFQKTSI--VHPSF 265
Query: 888 RXXXXXXXXXXXXXXXXXXLQRLDILGHLGGTPNYMLAPPKEQLVEKFFHPDNMSSAEKL 709
Q +I G L GTP YML PPK+QLVE +FHPDNMSSAEK+
Sbjct: 266 VNNLRSEFHKFTKAQKSDPFQNTNIWGVLSGTPKYMLEPPKDQLVETYFHPDNMSSAEKM 325
Query: 708 KLELRKVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVLHKKDKHSRKGLQEMVQXXXXX 529
K+EL KVR+EFKMSESDCGS+RVQVAQLTTKIKHLSSVLHKKDKHSRKGL MVQ
Sbjct: 326 KIELAKVREEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSRKGLIAMVQRRKKL 385
Query: 528 XXXXXRTDWDSYCFCLSKLGLRDNPDYK 445
RTDWDSYC LSKLGLRDNPDYK
Sbjct: 386 LKYMRRTDWDSYCLSLSKLGLRDNPDYK 413