BLASTX nr result

ID: Cimicifuga21_contig00005755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005755
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543006.1| PREDICTED: THO complex subunit 7 homolog [Gl...    85   7e-15
ref|XP_002520058.1| conserved hypothetical protein [Ricinus comm...    83   2e-14
ref|XP_003593730.1| THO complex subunit-like protein [Medicago t...    82   4e-14
ref|XP_003593729.1| THO complex subunit-like protein [Medicago t...    82   4e-14
gb|ABK96424.1| unknown [Populus trichocarpa x Populus deltoides]       80   1e-13

>ref|XP_003543006.1| PREDICTED: THO complex subunit 7 homolog [Glycine max]
          Length = 242

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   KQFSLLLHVVDELQNTIEDEQKSLVEELRIAMDEQKNSMEDANGGSEPMAVD 158
           KQF+LLLHVVDELQNTIE+EQKSLVEE+R+A +E KN MED NGG+E MA+D
Sbjct: 191 KQFALLLHVVDELQNTIEEEQKSLVEEMRMATEELKNGMEDTNGGAEAMAID 242


>ref|XP_002520058.1| conserved hypothetical protein [Ricinus communis]
           gi|223540822|gb|EEF42382.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 242

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/52 (73%), Positives = 49/52 (94%)
 Frame = +3

Query: 3   KQFSLLLHVVDELQNTIEDEQKSLVEELRIAMDEQKNSMEDANGGSEPMAVD 158
           KQF+LLLHVVDELQN+IE++QK+L+EE+R+A ++QKN MEDA+GGSE MAVD
Sbjct: 190 KQFALLLHVVDELQNSIEEDQKNLIEEMRMATEDQKNGMEDADGGSEAMAVD 241


>ref|XP_003593730.1| THO complex subunit-like protein [Medicago truncatula]
           gi|355482778|gb|AES63981.1| THO complex subunit-like
           protein [Medicago truncatula]
          Length = 130

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   KQFSLLLHVVDELQNTIEDEQKSLVEELRIAMDEQKNSMEDANGGSEPMAVD 158
           KQFSLLL VVDELQNTIE++QKSLVEE+R+A +E KN MEDA+GGS+ MAVD
Sbjct: 78  KQFSLLLQVVDELQNTIEEDQKSLVEEMRLATEELKNGMEDASGGSDAMAVD 129


>ref|XP_003593729.1| THO complex subunit-like protein [Medicago truncatula]
           gi|355482777|gb|AES63980.1| THO complex subunit-like
           protein [Medicago truncatula]
           gi|388493192|gb|AFK34662.1| unknown [Medicago
           truncatula]
          Length = 242

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = +3

Query: 3   KQFSLLLHVVDELQNTIEDEQKSLVEELRIAMDEQKNSMEDANGGSEPMAVD 158
           KQFSLLL VVDELQNTIE++QKSLVEE+R+A +E KN MEDA+GGS+ MAVD
Sbjct: 190 KQFSLLLQVVDELQNTIEEDQKSLVEEMRLATEELKNGMEDASGGSDAMAVD 241


>gb|ABK96424.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 240

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/52 (73%), Positives = 46/52 (88%)
 Frame = +3

Query: 3   KQFSLLLHVVDELQNTIEDEQKSLVEELRIAMDEQKNSMEDANGGSEPMAVD 158
           KQF LLLHVVDELQNTIE+++K+L+EE+R+A +EQKN MEDA G SE MAVD
Sbjct: 189 KQFVLLLHVVDELQNTIEEDEKNLIEEMRVATEEQKNGMEDAGGVSEAMAVD 240


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