BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005714
         (1747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vini...   558   e-156
ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sa...   522   e-145
ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arab...   512   e-142
ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis tha...   511   e-142
ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis ...   511   e-142

>ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
            gi|296084279|emb|CBI24667.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  558 bits (1439), Expect = e-156
 Identities = 304/444 (68%), Positives = 347/444 (78%), Gaps = 12/444 (2%)
 Frame = -2

Query: 1530 MACFRSLYPRISY-WNSLHCLRGIMSTSPGVQYNMVYNQLQRPFFPSPSSITTRKSFSEL 1354
            MAC+RS +  I + W +L+C R   S +  +  N    Q +R    SPS I +RK    L
Sbjct: 1    MACYRSSHHHIRFLWGNLNCWRSSFSRTQKIGNNSCCLQ-RRNLIHSPS-ILSRKGCCTL 58

Query: 1353 SYGLKPDSSAIPSAAT---SESILSKSSEVKGAVLQDNAVDA--------NPNPSHGRVM 1207
            S  L  DSS    A T     + +S  SE K  + Q   VD+        + + S+GRVM
Sbjct: 59   SNSL--DSSIHEVAHTISYGNTTISSKSERK--LCQGAFVDSVDHKERKMDISSSNGRVM 114

Query: 1206 LIDGTSIIYRAYYKLLAKLHHGHLTNADGNGDWVLTIFTALSLIFDVLEFVPSHVAVVFD 1027
            LIDGTSIIYRAYYKLLAKLHHG+L++ADGNGDWVLTIF ALSLI DVL+F+PSHVAVVFD
Sbjct: 115  LIDGTSIIYRAYYKLLAKLHHGYLSHADGNGDWVLTIFAALSLIVDVLDFIPSHVAVVFD 174

Query: 1026 HDGVPYGCTPIPSSGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKASIKAMSVK 847
            H+G+P+G T I S  S  AKGLNFRHTLYP YKS R PTPDT+VQGLQYLKASIKAMS+K
Sbjct: 175  HNGIPFGHTSISSKESIMAKGLNFRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIK 234

Query: 846  VIEVPGVEADDVIGTLAASSVAAGFKVRVVSPDKDFFQILSPSLRLLRIASRGSEMVSFG 667
            VIEVPGVEADDVIGTL+  SV AG+KVRVVSPDKDFFQILSPSLRLLRIA RG EM SFG
Sbjct: 235  VIEVPGVEADDVIGTLSVRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFG 294

Query: 666  LEEFANRYGTLQPSQFVDMISLTGDKCDNIPGVEGIGDVHALKLITKFGTLENLLKCVDQ 487
            +E+FA RYG L+PSQFVD+ISL GDK DNIPGVEGIG+VHA++LITKFGTLENLL+CVDQ
Sbjct: 295  MEDFAKRYGNLEPSQFVDVISLVGDKSDNIPGVEGIGNVHAVQLITKFGTLENLLQCVDQ 354

Query: 486  VEEERIKKALIANADIAILSKNLAMLRSDLPFYMVPFTTNDLVFRKPEDDGEKFTSLLRA 307
            V+EERI+KALI+ AD A+LSKNLA+LR DLPFYMVPFTT DL+F KPED+GEKFTSLL A
Sbjct: 355  VQEERIRKALISGADQAVLSKNLALLRCDLPFYMVPFTTEDLIFTKPEDNGEKFTSLLNA 414

Query: 306  IGAYAEGFSADHIIRRAHRLWNKL 235
            I AYAEGFSAD IIRRA  LW KL
Sbjct: 415  ISAYAEGFSADPIIRRAFYLWKKL 438


>ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sativus]
          Length = 461

 Score =  522 bits (1345), Expect = e-145
 Identities = 265/341 (77%), Positives = 300/341 (87%)
 Frame = -2

Query: 1257 QDNAVDANPNPSHGRVMLIDGTSIIYRAYYKLLAKLHHGHLTNADGNGDWVLTIFTALSL 1078
            +D  +D   NP+  RVMLIDGTSII+RAYYKLLAKLHHGHL++ADGNGDWVLTIFTALSL
Sbjct: 121  EDTGID---NPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSL 177

Query: 1077 IFDVLEFVPSHVAVVFDHDGVPYGCTPIPSSGSYKAKGLNFRHTLYPQYKSQRDPTPDTV 898
            I DVLE +PSHVAVVFDHDG PYG T I S+ ++ +KG  FRHT+YP YKS R PTPDTV
Sbjct: 178  IVDVLEIMPSHVAVVFDHDGHPYGHTYISSNENFMSKGSTFRHTIYPAYKSNRAPTPDTV 237

Query: 897  VQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAASSVAAGFKVRVVSPDKDFFQILSPS 718
            VQGLQYLKASIK+MS+KVIEVPGVEADDVIGTLA  SVA G KVRVVSPDKDFFQILSPS
Sbjct: 238  VQGLQYLKASIKSMSIKVIEVPGVEADDVIGTLALRSVAVGCKVRVVSPDKDFFQILSPS 297

Query: 717  LRLLRIASRGSEMVSFGLEEFANRYGTLQPSQFVDMISLTGDKCDNIPGVEGIGDVHALK 538
            LRLLRIASRG EMVSFGLE+FA+++G L+PSQFVD++SL GDK DNIPGV+GIG+V+A++
Sbjct: 298  LRLLRIASRGIEMVSFGLEDFADKFGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAVQ 357

Query: 537  LITKFGTLENLLKCVDQVEEERIKKALIANADIAILSKNLAMLRSDLPFYMVPFTTNDLV 358
            LIT+FGTLENLL+ VDQVE+ERIKK L+ NA+ AILSK+LA LRSDLPFYMVPFTT DL+
Sbjct: 358  LITRFGTLENLLQHVDQVEDERIKKMLVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLL 417

Query: 357  FRKPEDDGEKFTSLLRAIGAYAEGFSADHIIRRAHRLWNKL 235
            F+KPED+GEKFTSLL AIGAYAE FSAD IIRR   LW KL
Sbjct: 418  FKKPEDNGEKFTSLLTAIGAYAERFSADPIIRRVLYLWKKL 458


>ref|XP_002876121.1| hypothetical protein ARALYDRAFT_485561 [Arabidopsis lyrata subsp.
            lyrata] gi|297321959|gb|EFH52380.1| hypothetical protein
            ARALYDRAFT_485561 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score =  512 bits (1318), Expect = e-142
 Identities = 263/395 (66%), Positives = 319/395 (80%), Gaps = 8/395 (2%)
 Frame = -2

Query: 1395 SPSSITTRKSFSELSYGLKPDSSAIPSAATSESILS--KSSEV------KGAVLQDNAVD 1240
            SPS   + K +   +  L    S I + A S ++L+  KS +V      K     +  V 
Sbjct: 56   SPSLARSAKYYCSSTCNLDAAVSEISNDAASGNMLTSYKSEDVVAPETIKYPFKSEERVA 115

Query: 1239 ANPNPSHGRVMLIDGTSIIYRAYYKLLAKLHHGHLTNADGNGDWVLTIFTALSLIFDVLE 1060
            +    S+GRVMLIDGTSIIYRAYYKLLA+L+HGHL +ADGN DWVLTIF++LSL+ DVL+
Sbjct: 116  STAASSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLK 175

Query: 1059 FVPSHVAVVFDHDGVPYGCTPIPSSGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQY 880
            F+PSHVAVVFDHDGVPYG T   S+G   AKG+NFRHTLYP YKS R PTPDT+VQGLQY
Sbjct: 176  FLPSHVAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQY 235

Query: 879  LKASIKAMSVKVIEVPGVEADDVIGTLAASSVAAGFKVRVVSPDKDFFQILSPSLRLLRI 700
            LKASIKAMS+KVIEVPGVEADDVIGTLA  S++AGFKVRVVSPDKDFFQILSPSLRLLR+
Sbjct: 236  LKASIKAMSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRL 295

Query: 699  ASRGSEMVSFGLEEFANRYGTLQPSQFVDMISLTGDKCDNIPGVEGIGDVHALKLITKFG 520
              RGSEM SFG+E+FA ++G L+P+QFVD+I+L GDK DNIPGV+GIG+VHA++LI++FG
Sbjct: 296  TPRGSEMASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFG 355

Query: 519  TLENLLKCVDQVEEERIKKALIANADIAILSKNLAMLRSDLPFYMVPFTTNDLVFRKPED 340
            +LENLL+ VD+++E +IK++LIA+AD AILSK LA+LRSDLP Y+VPF T DL F+KPED
Sbjct: 356  SLENLLQSVDEIKEGKIKESLIASADQAILSKKLALLRSDLPDYIVPFDTKDLTFKKPED 415

Query: 339  DGEKFTSLLRAIGAYAEGFSADHIIRRAHRLWNKL 235
            +GEK +SLL AI  YAEGFSAD +IRRA+RLW KL
Sbjct: 416  NGEKLSSLLIAIADYAEGFSADPVIRRAYRLWEKL 450


>ref|NP_190773.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
            gi|145362483|ref|NP_974414.2| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
            gi|109946597|gb|ABG48477.1| At3g52050 [Arabidopsis
            thaliana] gi|332645358|gb|AEE78879.1| 5'-3'
            exonuclease-like protein [Arabidopsis thaliana]
            gi|332645359|gb|AEE78880.1| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
          Length = 425

 Score =  511 bits (1315), Expect = e-142
 Identities = 261/388 (67%), Positives = 314/388 (80%), Gaps = 1/388 (0%)
 Frame = -2

Query: 1395 SPSSITTRKSF-SELSYGLKPDSSAIPSAATSESILSKSSEVKGAVLQDNAVDANPNPSH 1219
            SPS   + K + S ++     + +A  S  TS S       +K     +  V +    S+
Sbjct: 34   SPSLARSAKYYCSSVAVSEFSNEAASGSTLTSISEDVTPQSIKYPFKSEERVASTAASSN 93

Query: 1218 GRVMLIDGTSIIYRAYYKLLAKLHHGHLTNADGNGDWVLTIFTALSLIFDVLEFVPSHVA 1039
            GRVMLIDGTSIIYRAYYKLLA+L+HGHL +ADGN DWVLTIF++LSL+ DVL+F+PSHVA
Sbjct: 94   GRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPSHVA 153

Query: 1038 VVFDHDGVPYGCTPIPSSGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKASIKA 859
            VVFDHDGVPYG T   S+G   AKG+NFRHTLYP YKS R PTPDT+VQGLQYLKASIKA
Sbjct: 154  VVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKA 213

Query: 858  MSVKVIEVPGVEADDVIGTLAASSVAAGFKVRVVSPDKDFFQILSPSLRLLRIASRGSEM 679
            MS+KVIEVPGVEADDVIGTLA  S++AGFKVRVVSPDKDFFQILSPSLRLLR+  RGSEM
Sbjct: 214  MSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRGSEM 273

Query: 678  VSFGLEEFANRYGTLQPSQFVDMISLTGDKCDNIPGVEGIGDVHALKLITKFGTLENLLK 499
             SFG+E+FA ++G L+P+QFVD+I+L GDK DNIPGV+GIG+VHA++LI++FGTLENLL+
Sbjct: 274  ASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTLENLLQ 333

Query: 498  CVDQVEEERIKKALIANADIAILSKNLAMLRSDLPFYMVPFTTNDLVFRKPEDDGEKFTS 319
             VD+++E +IK++LIA+AD AILSK LA+LRSDLP Y+VPF T DL F+KPED+GEK +S
Sbjct: 334  SVDEIKEGKIKESLIASADQAILSKKLALLRSDLPDYIVPFDTKDLTFKKPEDNGEKLSS 393

Query: 318  LLRAIGAYAEGFSADHIIRRAHRLWNKL 235
            LL AI  YAEGFSAD +IRRA RLW KL
Sbjct: 394  LLIAIADYAEGFSADPVIRRAFRLWEKL 421


>ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
            gi|332645360|gb|AEE78881.1| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
          Length = 448

 Score =  511 bits (1315), Expect = e-142
 Identities = 261/388 (67%), Positives = 314/388 (80%), Gaps = 1/388 (0%)
 Frame = -2

Query: 1395 SPSSITTRKSF-SELSYGLKPDSSAIPSAATSESILSKSSEVKGAVLQDNAVDANPNPSH 1219
            SPS   + K + S ++     + +A  S  TS S       +K     +  V +    S+
Sbjct: 57   SPSLARSAKYYCSSVAVSEFSNEAASGSTLTSISEDVTPQSIKYPFKSEERVASTAASSN 116

Query: 1218 GRVMLIDGTSIIYRAYYKLLAKLHHGHLTNADGNGDWVLTIFTALSLIFDVLEFVPSHVA 1039
            GRVMLIDGTSIIYRAYYKLLA+L+HGHL +ADGN DWVLTIF++LSL+ DVL+F+PSHVA
Sbjct: 117  GRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVLKFLPSHVA 176

Query: 1038 VVFDHDGVPYGCTPIPSSGSYKAKGLNFRHTLYPQYKSQRDPTPDTVVQGLQYLKASIKA 859
            VVFDHDGVPYG T   S+G   AKG+NFRHTLYP YKS R PTPDT+VQGLQYLKASIKA
Sbjct: 177  VVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQYLKASIKA 236

Query: 858  MSVKVIEVPGVEADDVIGTLAASSVAAGFKVRVVSPDKDFFQILSPSLRLLRIASRGSEM 679
            MS+KVIEVPGVEADDVIGTLA  S++AGFKVRVVSPDKDFFQILSPSLRLLR+  RGSEM
Sbjct: 237  MSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLRLTPRGSEM 296

Query: 678  VSFGLEEFANRYGTLQPSQFVDMISLTGDKCDNIPGVEGIGDVHALKLITKFGTLENLLK 499
             SFG+E+FA ++G L+P+QFVD+I+L GDK DNIPGV+GIG+VHA++LI++FGTLENLL+
Sbjct: 297  ASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRFGTLENLLQ 356

Query: 498  CVDQVEEERIKKALIANADIAILSKNLAMLRSDLPFYMVPFTTNDLVFRKPEDDGEKFTS 319
             VD+++E +IK++LIA+AD AILSK LA+LRSDLP Y+VPF T DL F+KPED+GEK +S
Sbjct: 357  SVDEIKEGKIKESLIASADQAILSKKLALLRSDLPDYIVPFDTKDLTFKKPEDNGEKLSS 416

Query: 318  LLRAIGAYAEGFSADHIIRRAHRLWNKL 235
            LL AI  YAEGFSAD +IRRA RLW KL
Sbjct: 417  LLIAIADYAEGFSADPVIRRAFRLWEKL 444