BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005709
         (1651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278056.1| PREDICTED: signal recognition particle recep...    93   2e-16
ref|XP_004167396.1| PREDICTED: signal recognition particle recep...    92   4e-16
ref|XP_004144723.1| PREDICTED: signal recognition particle recep...    92   4e-16
gb|AAQ76042.1| signal recognition particle receptor protein [Cuc...    92   4e-16
ref|XP_002324537.1| predicted protein [Populus trichocarpa] gi|2...    92   5e-16

>ref|XP_002278056.1| PREDICTED: signal recognition particle receptor subunit alpha [Vitis
            vinifera]
          Length = 616

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 90/377 (23%), Positives = 173/377 (45%), Gaps = 44/377 (11%)
 Frame = -3

Query: 1511 TPLHRLIDFSGLPPPHYNRRQIFSPMDDLYSISDLPLDIKKIIENLWESDENR-FETDFK 1335
            +P    +DF+     + +   +    D+  S+    +D ++I+ +  E++E+   E D K
Sbjct: 248  SPTESKLDFTDPADQNGDENAVIVAADEGESM----MDKEEIVSSESETEEDEEMEKDSK 303

Query: 1334 WEKTTSSERRFAPKDVYG----DDGELKKALDSLKERMMATNLSERVATKICGYLASHLI 1167
             E           + + G    +  +L+ AL +LK+R+M  N++E +A K+C  +A+ L 
Sbjct: 304  METKKKGWFSAMFQSIAGKANLEKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLE 363

Query: 1166 GKKGRLCTK--DFLKKVLSQGFHLILSPRLSTSALRRAVDCKRKMAVPFIVVLISDGGSE 993
            GKK    T+    ++  + +    IL+PR S   L R V   ++   P++VV +   G  
Sbjct: 364  GKKLASFTRVSSTVQAAMEEALVRILTPRRSIDIL-RDVHAAKEQRKPYVVVFVGVNGVG 422

Query: 992  TEKHLVQIANCFTREDFSVMVASCNLPR---LKNVNAHSNHRKFSVF-MSPEKDAYSRAR 825
               +L ++A    + + SVM+A+C+  R   ++ +  H+   +  +F    EKD    A+
Sbjct: 423  KSTNLAKVAYWLLQHNVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAK 482

Query: 824  QAIFQATSYGIDVLICDLAGHTE------------IDL-SPDLVLSMWEPF--------- 711
            +AI +AT  G DV++ D AG  +            ++L +PDLVL + E           
Sbjct: 483  EAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLVNLNNPDLVLFVGEALVGNDAVDQL 542

Query: 710  ---------FSDRKGKNRVDGVFTGNY--FSNKVEAAVTLADLMFFSGVSLLFAVFGRDD 564
                      S       +DG+    +    +KV AA++   +++ SG  ++F   G+  
Sbjct: 543  SKFNQKLADLSTSPKPQLIDGILLTKFDTIDDKVGAALS---MVYISGAPVMFVGCGQSY 599

Query: 563  QDLMVFDIEDLISTLTR 513
             DL   +++ ++ TL +
Sbjct: 600  TDLKKLNVKSIVKTLLK 616


>ref|XP_004167396.1| PREDICTED: signal recognition particle receptor subunit alpha
            homolog, partial [Cucumis sativus]
          Length = 356

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
 Frame = -3

Query: 1280 DDGELKKALDSLKERMMATNLSERVATKICGYLASHLIGKKGRLCTK--DFLKKVLSQGF 1107
            D  +L+ AL +LK+R+M  N++E +A K+C  +A+ L GKK    T+    ++  + +  
Sbjct: 66   DKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEAL 125

Query: 1106 HLILSPRLSTSALRRAVDCKRKMAVPFIVVLISDGGSETEKHLVQIANCFTREDFSVMVA 927
              IL+PR S   L R V   ++   P++VV +   G     +L ++A    +   SVM+A
Sbjct: 126  VRILTPRRSIDIL-RDVHAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 184

Query: 926  SCNLPR---LKNVNAHSNHRKFSVF-MSPEKDAYSRARQAIFQATSYGIDVLICDLAGHT 759
            +C+  R   ++ +  H+   +  +F    EKD    A++AI +A+  G DV++ D AG  
Sbjct: 185  ACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRM 244

Query: 758  E------------IDL-SPDLVLSMWEPF------------------FSDRKGKNRVDGV 672
            +            I+L SPDLVL + E                     S       +DG+
Sbjct: 245  QDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPEPRLIDGI 304

Query: 671  FTGNY--FSNKVEAAVTLADLMFFSGVSLLFAVFGRDDQDLMVFDIEDLISTLTR 513
                +    +KV AA++   +++ SG  ++F   G+   DL   +++ ++ TL +
Sbjct: 305  LLTKFDTIDDKVGAALS---MVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLIK 356


>ref|XP_004144723.1| PREDICTED: signal recognition particle receptor subunit alpha homolog
            [Cucumis sativus]
          Length = 617

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
 Frame = -3

Query: 1280 DDGELKKALDSLKERMMATNLSERVATKICGYLASHLIGKKGRLCTK--DFLKKVLSQGF 1107
            D  +L+ AL +LK+R+M  N++E +A K+C  +A+ L GKK    T+    ++  + +  
Sbjct: 327  DKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEAL 386

Query: 1106 HLILSPRLSTSALRRAVDCKRKMAVPFIVVLISDGGSETEKHLVQIANCFTREDFSVMVA 927
              IL+PR S   L R V   ++   P++VV +   G     +L ++A    +   SVM+A
Sbjct: 387  VRILTPRRSIDIL-RDVHAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 445

Query: 926  SCNLPR---LKNVNAHSNHRKFSVF-MSPEKDAYSRARQAIFQATSYGIDVLICDLAGHT 759
            +C+  R   ++ +  H+   +  +F    EKD    A++AI +A+  G DV++ D AG  
Sbjct: 446  ACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRM 505

Query: 758  E------------IDL-SPDLVLSMWEPF------------------FSDRKGKNRVDGV 672
            +            I+L SPDLVL + E                     S       +DG+
Sbjct: 506  QDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPEPRLIDGI 565

Query: 671  FTGNY--FSNKVEAAVTLADLMFFSGVSLLFAVFGRDDQDLMVFDIEDLISTLTR 513
                +    +KV AA++   +++ SG  ++F   G+   DL   +++ ++ TL +
Sbjct: 566  LLTKFDTIDDKVGAALS---MVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLIK 617


>gb|AAQ76042.1| signal recognition particle receptor protein [Cucumis sativus]
          Length = 313

 Score = 92.0 bits (227), Expect = 4e-16
 Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
 Frame = -3

Query: 1280 DDGELKKALDSLKERMMATNLSERVATKICGYLASHLIGKKGRLCTK--DFLKKVLSQGF 1107
            D  +L+ AL +LK+R+M  N++E +A K+C  +A+ L GKK    T+    ++  + +  
Sbjct: 23   DKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEAL 82

Query: 1106 HLILSPRLSTSALRRAVDCKRKMAVPFIVVLISDGGSETEKHLVQIANCFTREDFSVMVA 927
              IL+PR S   L R V   ++   P++VV +   G     +L ++A    +   SVM+A
Sbjct: 83   VRILTPRRSIDIL-RDVHAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 141

Query: 926  SCNLPR---LKNVNAHSNHRKFSVF-MSPEKDAYSRARQAIFQATSYGIDVLICDLAGHT 759
            +C+  R   ++ +  H+   +  +F    EKD    A++AI +A+  G DV++ D AG  
Sbjct: 142  ACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRM 201

Query: 758  E------------IDL-SPDLVLSMWEPF------------------FSDRKGKNRVDGV 672
            +            I+L SPDLVL + E                     S       +DG+
Sbjct: 202  QDNEPLMRALSKLINLNSPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPEPRLIDGI 261

Query: 671  FTGNY--FSNKVEAAVTLADLMFFSGVSLLFAVFGRDDQDLMVFDIEDLISTLTR 513
                +    +KV AA++   +++ SG  ++F   G+   DL   +++ ++ TL +
Sbjct: 262  LLTKFDTIDDKVGAALS---MVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLIK 313


>ref|XP_002324537.1| predicted protein [Populus trichocarpa] gi|222865971|gb|EEF03102.1|
            predicted protein [Populus trichocarpa]
          Length = 312

 Score = 91.7 bits (226), Expect = 5e-16
 Identities = 79/295 (26%), Positives = 140/295 (47%), Gaps = 39/295 (13%)
 Frame = -3

Query: 1280 DDGELKKALDSLKERMMATNLSERVATKICGYLASHLIGKKGRLCTK--DFLKKVLSQGF 1107
            +  +L+ AL +LK+R+M  N++E +A K+C  +A+ L GKK    T+    ++  + +  
Sbjct: 22   EKADLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEEAL 81

Query: 1106 HLILSPRLSTSALRRAVDCKRKMAVPFIVVLISDGGSETEKHLVQIANCFTREDFSVMVA 927
              IL+PR S   L R V   R+   P++VV +   G     +L ++A    +   SVM+A
Sbjct: 82   VRILTPRRSIDIL-RDVHAAREQRKPYVVVFVGVNGVGKSTNLAKVAYWLLQHKVSVMMA 140

Query: 926  SCNLPR---LKNVNAHSNHRKFSVF-MSPEKDAYSRARQAIFQATSYGIDVLICDLAGHT 759
            +C+  R   ++ +  H+   +  +F    EKD    A++AI +AT  G DV++ D AG  
Sbjct: 141  ACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRM 200

Query: 758  E------------IDL-SPDLVLSMWEPF------------------FSDRKGKNRVDGV 672
            +            I+L +PDLVL + E                     S       +DG+
Sbjct: 201  QDNEPLMRALSKLINLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPNPRLIDGI 260

Query: 671  FTGNY--FSNKVEAAVTLADLMFFSGVSLLFAVFGRDDQDLMVFDIEDLISTLTR 513
                +    +KV AA++   +++ SG  ++F   G+   DL   +++ +I TL +
Sbjct: 261  LLTKFDTIDDKVGAALS---MVYISGSPVMFVGCGQSYTDLKKLNVKAIIKTLLK 312