BLASTX nr result

ID: Cimicifuga21_contig00005702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005702
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269518.2| PREDICTED: survival of motor neuron-related-...   440   e-121
ref|XP_002328804.1| predicted protein [Populus trichocarpa] gi|1...   407   e-111
ref|XP_004142808.1| PREDICTED: survival of motor neuron-related-...   405   e-110
gb|AFK41014.1| unknown [Lotus japonicus]                              401   e-109
ref|XP_003550056.1| PREDICTED: survival of motor neuron-related-...   397   e-108

>ref|XP_002269518.2| PREDICTED: survival of motor neuron-related-splicing factor 30-like
            [Vitis vinifera]
          Length = 301

 Score =  440 bits (1132), Expect = e-121
 Identities = 226/303 (74%), Positives = 252/303 (83%), Gaps = 1/303 (0%)
 Frame = +2

Query: 134  MQGSEELSIDELASNLSTYKEQLLQVRKLLEDDPGNSEYADMEKELEDVIELTEELLATA 313
            MQG EELSIDELASNLSTYK+QL QVRKLL DDPGNSEY DMEKELE+VI LTEELLATA
Sbjct: 1    MQGGEELSIDELASNLSTYKDQLQQVRKLLVDDPGNSEYVDMEKELEEVIVLTEELLATA 60

Query: 314  KQNGITGLNIGNDEGASPSQHLSDEASHYTMASDDMSE-FERLPVGTKVQAVWSEDGEWY 490
            KQ+ I+    G +  ASP QH S  +S + M   + S+ + + P+GTKVQAVWSEDGEWY
Sbjct: 61   KQSEISLPAFGTNADASPIQHQSGGSSEHLMEPGNNSDHYGKFPIGTKVQAVWSEDGEWY 120

Query: 491  DATIESHTPNGYFVAYNEWGNKEEVDPGNVRPVEEEGAVNTLLVAEKEAEATKQAIKRKI 670
            +ATI+S TP+GY+V+Y+ WGNKEEVDPGNVRP++EE  VN LL AEKEAEATKQAIKRKI
Sbjct: 121  EATIDSLTPDGYYVSYDGWGNKEEVDPGNVRPIQEE--VNALLEAEKEAEATKQAIKRKI 178

Query: 671  AQAGVVDFQSRTLPAKLRIEPDDSEDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQ 850
            AQA   DFQSR+LPAKLRIEPDD EDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQ
Sbjct: 179  AQAAATDFQSRSLPAKLRIEPDDPEDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQ 238

Query: 851  FQTTKGRAKKVGFFSGRKRESIFKSPDDPXXXXXXXXXXXXLTDFPQREKHLHLKAGGAE 1030
            FQTTKGRAKK+GFFSGRKRESIFKSPDDP            LT+F +REKHLHLK G A+
Sbjct: 239  FQTTKGRAKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGGSAD 298

Query: 1031 TDE 1039
            TD+
Sbjct: 299  TDD 301


>ref|XP_002328804.1| predicted protein [Populus trichocarpa] gi|118483337|gb|ABK93570.1|
            unknown [Populus trichocarpa] gi|222839102|gb|EEE77453.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  407 bits (1046), Expect = e-111
 Identities = 214/302 (70%), Positives = 235/302 (77%)
 Frame = +2

Query: 134  MQGSEELSIDELASNLSTYKEQLLQVRKLLEDDPGNSEYADMEKELEDVIELTEELLATA 313
            MQG EE+SI+ELASNLSTYKEQL QVR+LL DDPGNSEY DMEKEL +VI LTEELL TA
Sbjct: 1    MQG-EEVSIEELASNLSTYKEQLHQVRQLLVDDPGNSEYVDMEKELIEVIALTEELLETA 59

Query: 314  KQNGITGLNIGNDEGASPSQHLSDEASHYTMASDDMSEFERLPVGTKVQAVWSEDGEWYD 493
            KQN I+G ++G    ASP      EA  +          E+ P+G+KVQAVWSEDGEWYD
Sbjct: 60   KQNEISGSHLGTGASASPGYAEPQEADQH----------EKFPIGSKVQAVWSEDGEWYD 109

Query: 494  ATIESHTPNGYFVAYNEWGNKEEVDPGNVRPVEEEGAVNTLLVAEKEAEATKQAIKRKIA 673
            AT+E  TPNGY+V ++ WGN+EEVDP NVRPVE     N LL AEK AEATKQAIKRKIA
Sbjct: 110  ATVEDLTPNGYYVTFDGWGNREEVDPDNVRPVE----FNALLEAEKVAEATKQAIKRKIA 165

Query: 674  QAGVVDFQSRTLPAKLRIEPDDSEDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQF 853
            QA  VDFQSRTLPAKLRIEPDDSEDVK AKRKKIH+FKSKMRFEQLEV QNKRQNAWQQF
Sbjct: 166  QAASVDFQSRTLPAKLRIEPDDSEDVKAAKRKKIHSFKSKMRFEQLEVAQNKRQNAWQQF 225

Query: 854  QTTKGRAKKVGFFSGRKRESIFKSPDDPXXXXXXXXXXXXLTDFPQREKHLHLKAGGAET 1033
            QTTKG+ KKVGFFSGRKRESIFKSPDDP            LT+F +REKHLHLK G  E 
Sbjct: 226  QTTKGKTKKVGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKDGSVEI 285

Query: 1034 DE 1039
            D+
Sbjct: 286  DD 287


>ref|XP_004142808.1| PREDICTED: survival of motor neuron-related-splicing factor 30-like
            isoform 1 [Cucumis sativus]
          Length = 299

 Score =  405 bits (1040), Expect = e-110
 Identities = 210/304 (69%), Positives = 242/304 (79%), Gaps = 2/304 (0%)
 Frame = +2

Query: 134  MQGSEELSIDELASNLSTYKEQLLQVRKLLEDDPGNSEYADMEKELEDVIELTEELLATA 313
            MQG E++SI+ELA+NLSTYK+QL QVR+LL+DDPGNSEY DMEKELE+VI LTEELL+TA
Sbjct: 1    MQGGEDVSIEELANNLSTYKDQLHQVRQLLDDDPGNSEYIDMEKELEEVIALTEELLSTA 60

Query: 314  KQNGITGLNIGN-DEGASPSQHLSDEASHYTMASDDMSEF-ERLPVGTKVQAVWSEDGEW 487
            KQN ++G N+   D+ AS     S E     M +  MS++ E+ P+GTKVQAVWSEDGEW
Sbjct: 61   KQNEVSGSNVETGDDSASIGFQQSKENE---MEAGSMSDYHEKFPIGTKVQAVWSEDGEW 117

Query: 488  YDATIESHTPNGYFVAYNEWGNKEEVDPGNVRPVEEEGAVNTLLVAEKEAEATKQAIKRK 667
            YDATIE+HT NG++V+Y+ WGNKEEVDP NVR ++ E  VN LL AE+ AEATKQAIKRK
Sbjct: 118  YDATIEAHTVNGFYVSYDGWGNKEEVDPANVRTIQLE--VNPLLEAERVAEATKQAIKRK 175

Query: 668  IAQAGVVDFQSRTLPAKLRIEPDDSEDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQ 847
            IAQA  VDFQSR LP+KLRIEPDD EDVK  KRKKIHAFKSKMR EQLEVTQNKRQNAWQ
Sbjct: 176  IAQAASVDFQSRNLPSKLRIEPDDPEDVKATKRKKIHAFKSKMRIEQLEVTQNKRQNAWQ 235

Query: 848  QFQTTKGRAKKVGFFSGRKRESIFKSPDDPXXXXXXXXXXXXLTDFPQREKHLHLKAGGA 1027
            QFQT KG++KK+GFFSGRKRESIFKSPDDP            LT+F +REKHLHLK    
Sbjct: 236  QFQTAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKREKHLHLKGATV 295

Query: 1028 ETDE 1039
            E DE
Sbjct: 296  EMDE 299


>gb|AFK41014.1| unknown [Lotus japonicus]
          Length = 301

 Score =  401 bits (1030), Expect = e-109
 Identities = 203/301 (67%), Positives = 236/301 (78%)
 Frame = +2

Query: 137  QGSEELSIDELASNLSTYKEQLLQVRKLLEDDPGNSEYADMEKELEDVIELTEELLATAK 316
            QGS+E+SI+ELASNLSTYK+QL QVR+LL DDP NSEY DME+EL +VI LTEELLATAK
Sbjct: 4    QGSDEVSIEELASNLSTYKDQLYQVRQLLNDDPSNSEYVDMERELREVIALTEELLATAK 63

Query: 317  QNGITGLNIGNDEGASPSQHLSDEASHYTMASDDMSEFERLPVGTKVQAVWSEDGEWYDA 496
            QN ++  N   +   SPS  LS+   +           ++ PVG+K+QAVWS+DGEWY+A
Sbjct: 64   QNEMSSSNAVPNADTSPS--LSNPMENKGELDSSYDHEQKFPVGSKIQAVWSDDGEWYEA 121

Query: 497  TIESHTPNGYFVAYNEWGNKEEVDPGNVRPVEEEGAVNTLLVAEKEAEATKQAIKRKIAQ 676
            TIE+HTPNGY+V Y  WGN+EEVDP N+R V+E G V+ LL AE+ AEATKQAIKRKI+Q
Sbjct: 122  TIEAHTPNGYYVRYENWGNREEVDPANIRLVQE-GTVDALLEAERVAEATKQAIKRKISQ 180

Query: 677  AGVVDFQSRTLPAKLRIEPDDSEDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQ 856
            A  VDFQSR+LPAKLRIEPDD EDVK AKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQ
Sbjct: 181  AASVDFQSRSLPAKLRIEPDDPEDVKAAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQ 240

Query: 857  TTKGRAKKVGFFSGRKRESIFKSPDDPXXXXXXXXXXXXLTDFPQREKHLHLKAGGAETD 1036
            +TKG+ KK+GFFSGRKRESIFKSPD+P            LT+F +REKH HLK G  E D
Sbjct: 241  STKGKTKKIGFFSGRKRESIFKSPDEPQGKVGVTGSGKGLTEFQKREKHFHLKDGSVEND 300

Query: 1037 E 1039
            E
Sbjct: 301  E 301


>ref|XP_003550056.1| PREDICTED: survival of motor neuron-related-splicing factor 30-like
            isoform 1 [Glycine max]
          Length = 298

 Score =  397 bits (1019), Expect = e-108
 Identities = 205/301 (68%), Positives = 238/301 (79%)
 Frame = +2

Query: 137  QGSEELSIDELASNLSTYKEQLLQVRKLLEDDPGNSEYADMEKELEDVIELTEELLATAK 316
            QG +E+SI+ELASNLS YK+QL QVR+LL DDP NSEY DME+EL +VI LTEELLATAK
Sbjct: 4    QGVDEVSIEELASNLSLYKDQLNQVRELLNDDPANSEYVDMERELSEVIALTEELLATAK 63

Query: 317  QNGITGLNIGNDEGASPSQHLSDEASHYTMASDDMSEFERLPVGTKVQAVWSEDGEWYDA 496
            QN I+     N+  ASP+  + +E      +SD     E+LPVGTKVQAVWSEDGEWYDA
Sbjct: 64   QNEISAPP--NNAAASPTLSIHNENQLLDSSSDHQ---EKLPVGTKVQAVWSEDGEWYDA 118

Query: 497  TIESHTPNGYFVAYNEWGNKEEVDPGNVRPVEEEGAVNTLLVAEKEAEATKQAIKRKIAQ 676
            TIE++TPNGY+V+Y+ WGNKEEVDP NVR ++E G+V+ LL AE+ AEATKQAIKRKIAQ
Sbjct: 119  TIEAYTPNGYYVSYDNWGNKEEVDPANVRSIQE-GSVDALLEAERVAEATKQAIKRKIAQ 177

Query: 677  AGVVDFQSRTLPAKLRIEPDDSEDVKIAKRKKIHAFKSKMRFEQLEVTQNKRQNAWQQFQ 856
            A  +D QSR+LP KLRIE DD EDVK +KRKKIHAFKSKMR EQLEVTQNKRQNAWQQFQ
Sbjct: 178  AASIDLQSRSLPTKLRIEADDPEDVKASKRKKIHAFKSKMRMEQLEVTQNKRQNAWQQFQ 237

Query: 857  TTKGRAKKVGFFSGRKRESIFKSPDDPXXXXXXXXXXXXLTDFPQREKHLHLKAGGAETD 1036
            +TKG+AKK+GFFSGRKRESIFKSPDDP            LT+F +REKH HLK G  E D
Sbjct: 238  STKGKAKKIGFFSGRKRESIFKSPDDPQGKVGVTGSGKGLTEFQKREKHFHLKDGTVEND 297

Query: 1037 E 1039
            +
Sbjct: 298  D 298


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