BLASTX nr result

ID: Cimicifuga21_contig00005701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005701
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   159   8e-37
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   158   2e-36
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...   157   5e-36
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   157   5e-36
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   157   5e-36

>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
            gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  159 bits (403), Expect = 8e-37
 Identities = 122/364 (33%), Positives = 178/364 (48%), Gaps = 10/364 (2%)
 Frame = +2

Query: 2    VAEILSWLPVKSLVRFRCVSKAWFRLLTVDPHFVKLHLYRSSL--------IPIVNIMAL 157
            V EILS LPVKSL++FRCV K+W  L++ DP+F+K HL+ SS         I +    A 
Sbjct: 54   VVEILSRLPVKSLLQFRCVCKSWMSLIS-DPYFMKKHLHLSSRCTHFTHHRIILSATTAE 112

Query: 158  RGLGQISNSKLKFYSAEYDSCDKAIELKLPFEEPQKRYPIVGSCNGLFCLTNHNNSSVHL 337
              L   S S L F +     CD   +L  P +   +   IVGSCNGL C     +  V L
Sbjct: 113  FHLKSCSLSSL-FNNPSSTVCD---DLNYPVKNKFRHDGIVGSCNGLLCFAIKGDC-VLL 167

Query: 338  WNPCTGDYITIPCSPTHYPYDYTISTHFGFGFDQTNNEYKIVRFQXXXXXXXXXXXXXDV 517
            WNP     ++    P    +     T FG G+D  N +YK+V                 V
Sbjct: 168  WNPSIR--VSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAV-FCDPSEYFIECKVKV 224

Query: 518  YTLGTNSWRSLEAIPQRVTSFQSSNALVNGSLHWIATQPGPLSLCWNLIVSFNIRDEAFQ 697
            Y++ TNSWR ++  P     FQ+S   V+G+L+W A      S  W +IVS ++  E ++
Sbjct: 225  YSMATNSWRKIQDFPHGFLPFQNSGKFVSGTLNWAANHSIGPSSFW-VIVSLDLHKETYR 283

Query: 698  ELLQPYDVRTAMIYPDDVIVGGLDGSLCLFCHQPEEEIEIWVMKEYGVEDSWTKQFKIGR 877
            E+L P   +     P    +G L G LC+     +    +W+MK+YGV +SW K   I  
Sbjct: 284  EVLPPDYEKEDCSTPS---LGVLQGCLCMNYDYKKTHFVVWMMKDYGVRESWVKLVSIPY 340

Query: 878  PMVTGSLCYLEPIGIAKNGDIIVKKNTQHVVLYDPKSNSIK--KLKSFRFRSYKAYGYVG 1051
                    Y  P  I++NG +++      ++LYDP++NS K  K++S +   + A  YV 
Sbjct: 341  VPNPEDFSYSGPYYISENGKVLLMFEFD-LILYDPRNNSFKYPKIESGK-GWFDAEVYVE 398

Query: 1052 SLVS 1063
            +LVS
Sbjct: 399  TLVS 402


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  158 bits (399), Expect = 2e-36
 Identities = 127/380 (33%), Positives = 188/380 (49%), Gaps = 27/380 (7%)
 Frame = +2

Query: 5    AEILSWLPVKSLVRFRCVSKAWFRLLTVDPHFVKLHLYRSSLIPIVNIMALRGLGQISNS 184
            A+ILS LPVKSL RFRCVSK+W + +   P+F+  HL RSS        A   L  I   
Sbjct: 9    ADILSRLPVKSLKRFRCVSKSWCKEID-SPYFINTHLKRSS-------QAHTHLNLILRD 60

Query: 185  KLKFYSAEYDSCD-KAIELKL-PFEEPQKRYPIVGSCNGLFCLTNHNNSSVHLWNPCTGD 358
                 + + DS D  +IELK  P +       ++GSCNGL  L N ++ S+ L+NP T +
Sbjct: 61   ATNLCTVDLDSPDFTSIELKNNPLKSDDCATEVMGSCNGLLALLN-SDFSIALYNPSTRE 119

Query: 359  YITIPCSPTHYPYDY------TISTHFGFGFDQTNNEYKIVRFQXXXXXXXXXXXXXDV- 517
               IP SP   P D       ++   +GFG D  N +YK+VRF              +V 
Sbjct: 120  KKMIPVSPLELPNDLDDSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVK 179

Query: 518  -YTLGTNSWRSLEAIPQRVTSF----------QSSNALVNGSLHWIATQPGP-LSLCWNL 661
             Y+L +NSW+ ++  P  +             +      N ++HW AT  G       +L
Sbjct: 180  VYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDL 239

Query: 662  IVSFNIRDEAFQELLQPYDVRTAMIYPDDVIVGGLDGSLCLFCHQPEEEIEIWVMKEYGV 841
            IV+F++  E F+ + QP           ++ VG L G LC+FC++  +++EIWVMKEYGV
Sbjct: 240  IVAFDLGAEEFKIIPQP----DYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGV 295

Query: 842  EDSWTKQFK-IGRPMVTGSLCYLEPIGIAKNGD-IIVKKNTQHVVLYDPKSNSIKKLKSF 1015
            ++SWT     I +  V     +  P+  +K GD I+++ + +  V YD +    +K K  
Sbjct: 296  KESWTHLCTVIAQLQVKAFWLHARPLAYSKGGDKILLELDNRFFVWYDLRR---RKSKII 352

Query: 1016 RFRS----YKAYGYVGSLVS 1063
            R R     + A   VGSLV+
Sbjct: 353  RIRGAPPIFIAEICVGSLVT 372


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score =  157 bits (396), Expect = 5e-36
 Identities = 117/364 (32%), Positives = 177/364 (48%), Gaps = 10/364 (2%)
 Frame = +2

Query: 2    VAEILSWLPVKSLVRFRCVSKAWFRLLTVDPHFVKLHLYRSSLIPIVNIMALRGLGQISN 181
            V EILS LPVKSL++FRCV K+W  L+  DP+F+K HL+ SS     +    R +   + 
Sbjct: 54   VVEILSRLPVKSLLQFRCVCKSWMSLI-YDPYFMKKHLHLSSRS--THFTHHRIILSATT 110

Query: 182  SKLKFYSAEYDS--------CDKAIELKLPFEEPQKRYPIVGSCNGLFCLTNHNNSSVHL 337
            ++    S    S        CD   EL  P +   +   IVGSCNGL C     +  V L
Sbjct: 111  AEFHLKSCSLSSLFNNLSTVCD---ELNYPVKNKFRHDGIVGSCNGLLCFAIKGDC-VLL 166

Query: 338  WNPCTGDYITIPCSPTHYPYDYTISTHFGFGFDQTNNEYKIVRFQXXXXXXXXXXXXXDV 517
            WNP     ++    P    +     T FG G+D  N +YK+V                 V
Sbjct: 167  WNPSIR--VSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAV-FCDPSEYFIECKVKV 223

Query: 518  YTLGTNSWRSLEAIPQRVTSFQSSNALVNGSLHWIATQPGPLSLCWNLIVSFNIRDEAFQ 697
            Y++ TNSWR ++  P   + FQ+S   V+G+L+W A      S  W +IVS ++  E ++
Sbjct: 224  YSMATNSWRKIQDFPHGFSPFQNSGKFVSGTLNWAANHSIGSSSLW-VIVSLDLHKETYR 282

Query: 698  ELLQPYDVRTAMIYPDDVIVGGLDGSLCLFCHQPEEEIEIWVMKEYGVEDSWTKQFKIGR 877
            E+L P   +     P    +G L G LC+     +    +W+MK+YG  +SW K   I  
Sbjct: 283  EVLPPDYEKEDCSTPG---LGVLQGCLCMNYDYKKTHFVVWMMKDYGARESWVKLVSIPY 339

Query: 878  PMVTGSLCYLEPIGIAKNGDIIVKKNTQHVVLYDPKSNSIK--KLKSFRFRSYKAYGYVG 1051
                 +  Y  P  I++NG++++      ++LY+P+ NS K  K++S +   + A  YV 
Sbjct: 340  VPNPENFSYSGPYYISENGEVLLMFEFD-LILYNPRDNSFKYPKIESGK-GWFDAEVYVE 397

Query: 1052 SLVS 1063
            +LVS
Sbjct: 398  TLVS 401


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
            gi|222854763|gb|EEE92310.1| f-box family protein [Populus
            trichocarpa]
          Length = 396

 Score =  157 bits (396), Expect = 5e-36
 Identities = 114/360 (31%), Positives = 179/360 (49%), Gaps = 6/360 (1%)
 Frame = +2

Query: 2    VAEILSWLPVKSLVRFRCVSKAWFRLLTVDPHFVKLHLYRSSLIPIVNIMALRGLGQISN 181
            +AEIL  LP K L+  R VSK W  L+   P+FVKLHL  S        + LR    +  
Sbjct: 9    IAEILCRLPAKELLCCRSVSKPWCALID-GPNFVKLHLKHSMDTSSNLYIILRTTSHVHY 67

Query: 182  SKLKFYSAEYDSCDKAIELKLPFEEPQKRYPIVGSCNGLFCLTNHNNSSVHLWNPCTGDY 361
               +  +   + C    EL  P         ++GS NGL C++N  +  + +WNP T  +
Sbjct: 68   MDFE-QNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDD-IAVWNPSTRKH 125

Query: 362  ITIPCSPTHYP-YDYTISTH---FGFGFDQTNNEYKIVRF-QXXXXXXXXXXXXXDVYTL 526
              +P  P     Y  T S     FGFG+D   ++YK+VR  Q              VY+L
Sbjct: 126  RVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYSL 185

Query: 527  GTNSWRSLEAIPQRVTSFQSSNALVNGSLHWIATQPGPLSLCWNLIVSFNIRDEAFQELL 706
               SWR +  +P  V    ++    NG+LHW+  +  P S   N++V+ ++  E ++E+L
Sbjct: 186  RKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGE-NPESNVANIVVALDLGVEDYREVL 244

Query: 707  QPYDVRTAMIYPDDVIVGGLDGSLCLFCHQPEEEIEIWVMKEYGVEDSWTKQFKIGRPMV 886
            QP + +    Y D   +G L G LC   +   E +++W+MKEYGV++SWTK F + +  V
Sbjct: 245  QP-EYKDKNFYID---LGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVAQYEV 300

Query: 887  TGSLCYLEPIGIAKNGD-IIVKKNTQHVVLYDPKSNSIKKLKSFRFRSYKAYGYVGSLVS 1063
             G L  L+P+  +K+GD ++++ +   +  YD K   +K        S++A  +V SL+S
Sbjct: 301  IGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKNRIPGIPYSFEADTFVESLIS 360


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  157 bits (396), Expect = 5e-36
 Identities = 112/363 (30%), Positives = 174/363 (47%), Gaps = 30/363 (8%)
 Frame = +2

Query: 8    EILSWLPVKSLVRFRCVSKAWFRLLTVDPHFVKLHLYRSSLIPIVNIMALRGLGQISNSK 187
            +ILS LP+ SLV+F+CV +AW R + +DP  V L+L  S+      ++        +N  
Sbjct: 35   DILSRLPITSLVKFKCVCRAW-RAMALDPEVVNLYLSCSTQETDPCVILHCDFPIRNNLY 93

Query: 188  LKFYSAEYDSCDKAIELKLPFEEPQKRYPIVGSCNGLFCLTNHN-NSSVHLWNPCTGDYI 364
               ++A  +  +K   ++ PF      + +VGSCNGL CL++   N S++++NP TG Y 
Sbjct: 94   FVDFAAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGLLCLSDSLFNDSLYIYNPFTGRYK 153

Query: 365  TIPCSPTHYPYDYTISTHFGFGFDQTNNEYKIVRF---------QXXXXXXXXXXXXXDV 517
             +P S   YP    +   FGFGF+   NEYK++R                         +
Sbjct: 154  ELPKS-LQYPDQEVV---FGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQI 209

Query: 518  YTLGTNSWRSLEAIPQRVTSFQSSNALVNGSLHWIATQPGPLSLCWNL----IVSFNIRD 685
             TLG   WRSL  +  R+   ++S  LVNG LHW++        C N     +VSF++ D
Sbjct: 210  LTLGCPGWRSLGKVSYRLVR-RASETLVNGRLHWVSRP------CRNKPARRLVSFDLTD 262

Query: 686  EAFQELLQPYDVRTAMIYPDDVIVGGLDGSLCLFCHQPEEEIEIWVMKEYGVEDSWTKQF 865
            E F+E+ +P       +   D  +  L G L +  +     +EIWVMKEY V++SW K++
Sbjct: 263  EQFREVPKP---DCGGLNRCDYHLAVLRGCLSVAVYCNYGRLEIWVMKEYNVKESWVKEY 319

Query: 866  KIGRPMVTGSLCYL----------------EPIGIAKNGDIIVKKNTQHVVLYDPKSNSI 997
             IG  M  G    L                  + + KNG+I+++   + +V YDPK    
Sbjct: 320  NIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRALVSYDPKKGKF 379

Query: 998  KKL 1006
            K +
Sbjct: 380  KDI 382


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