BLASTX nr result

ID: Cimicifuga21_contig00005603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005603
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vin...   290   4e-76
ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805...   279   9e-73
gb|AFK43947.1| unknown [Lotus japonicus]                              274   2e-71
emb|CBI31989.3| unnamed protein product [Vitis vinifera]              272   1e-70
ref|XP_002520109.1| nucleic acid binding protein, putative [Rici...   271   2e-70

>ref|XP_002276614.1| PREDICTED: protein vip1 isoform 1 [Vitis vinifera]
           gi|225425750|ref|XP_002276661.1| PREDICTED: protein vip1
           isoform 2 [Vitis vinifera]
           gi|359473262|ref|XP_003631279.1| PREDICTED: protein vip1
           [Vitis vinifera]
          Length = 246

 Score =  290 bits (742), Expect = 4e-76
 Identities = 153/243 (62%), Positives = 171/243 (70%), Gaps = 1/243 (0%)
 Frame = -3

Query: 919 MSPTGYIAEVTGLSPNATEKDVYDFFAFSGSVEHVEIVRFGDY-ACTAYVTFKDSYGLEN 743
           MS +G+  EVT LSP  TEKDVYDFFAFSG++E VE+VR  D  ACTAYVTFKD+Y +E 
Sbjct: 1   MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60

Query: 742 AALLSGATIVDQRVCITRWGQNEDEFNIWNRSSWKIEEETSSSHTPNENPSINTAGEAVT 563
           A LLSGATIVDQRVCITRWG  EDEF++WNR +WK+E+ETSS+H P  N S   AGEAVT
Sbjct: 61  AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSSTHAPETNRSYPDAGEAVT 120

Query: 562 MAQEVVKTMLAKGYVLGKDALSKAKAFDESHQVSATAAEKVAEMSKRIGLTDKICAGVGA 383
           MAQEVVKTMLAKGY+LGKDALSKAK FDESHQ SATA   VAE+S+RIGLTDK CAGV A
Sbjct: 121 MAQEVVKTMLAKGYILGKDALSKAKTFDESHQFSATAVATVAELSQRIGLTDKFCAGVEA 180

Query: 382 VKSVDEKYGXXXXXXXXXXXXXXXXXXXXXXXXXXSYFSMGALWVSXXXXXXXXXXXXLG 203
            KSVD++Y                           SYFS GALWVS            LG
Sbjct: 181 AKSVDQRYHISEITKSAVSATGRTAAAAATTVVNSSYFSKGALWVSDALSRAAKAAGDLG 240

Query: 202 SHG 194
           SHG
Sbjct: 241 SHG 243


>ref|XP_003519023.1| PREDICTED: uncharacterized protein LOC100805907 [Glycine max]
          Length = 244

 Score =  279 bits (713), Expect = 9e-73
 Identities = 145/244 (59%), Positives = 175/244 (71%)
 Frame = -3

Query: 919 MSPTGYIAEVTGLSPNATEKDVYDFFAFSGSVEHVEIVRFGDYACTAYVTFKDSYGLENA 740
           M+  GY  EVTGLSP AT+KDV DFFAFSG +E+VEI+R GDYACTAYVTFKD+Y  E A
Sbjct: 1   MNSGGYAVEVTGLSPKATDKDVRDFFAFSGVIENVEIIRSGDYACTAYVTFKDAYAQETA 60

Query: 739 ALLSGATIVDQRVCITRWGQNEDEFNIWNRSSWKIEEETSSSHTPNENPSINTAGEAVTM 560
            LLSGATI+DQRVCITRWG  EDEF+ WN+ S+  E+ET+S+ TP  N  +++AGEAVTM
Sbjct: 61  CLLSGATILDQRVCITRWGHYEDEFDFWNQPSYSHEDETAST-TPQSNQFVSSAGEAVTM 119

Query: 559 AQEVVKTMLAKGYVLGKDALSKAKAFDESHQVSATAAEKVAEMSKRIGLTDKICAGVGAV 380
           AQEVV+TML+KGYVL KDAL+KAK FDESHQVSATA  KV+E+S+RIGL+DKI AG+GAV
Sbjct: 120 AQEVVRTMLSKGYVLSKDALAKAKDFDESHQVSATATAKVSELSQRIGLSDKISAGIGAV 179

Query: 379 KSVDEKYGXXXXXXXXXXXXXXXXXXXXXXXXXXSYFSMGALWVSXXXXXXXXXXXXLGS 200
           KSVD++Y                           SYFS GALWVS            +G+
Sbjct: 180 KSVDQRYNVSETTMAAASTAGRSVAAAANSLVNSSYFSKGALWVSGALTRAAQVASDMGT 239

Query: 199 HGNK 188
           H ++
Sbjct: 240 HRDR 243


>gb|AFK43947.1| unknown [Lotus japonicus]
          Length = 245

 Score =  274 bits (701), Expect = 2e-71
 Identities = 143/240 (59%), Positives = 171/240 (71%)
 Frame = -3

Query: 907 GYIAEVTGLSPNATEKDVYDFFAFSGSVEHVEIVRFGDYACTAYVTFKDSYGLENAALLS 728
           GY  EVTGLSPNATEKDV+DFF+FSG+++HVEI+R GDYACTAYVTFKD+Y  E A LLS
Sbjct: 6   GYTVEVTGLSPNATEKDVHDFFSFSGAIQHVEIIRSGDYACTAYVTFKDAYSQETACLLS 65

Query: 727 GATIVDQRVCITRWGQNEDEFNIWNRSSWKIEEETSSSHTPNENPSINTAGEAVTMAQEV 548
           GATI+DQRVCITRWG  ED ++ WNR S+  EEE +S+ TP+ N  +++AGEAVT+AQEV
Sbjct: 66  GATILDQRVCITRWGNYEDAYDFWNRPSYSHEEERTST-TPHSNQFVSSAGEAVTVAQEV 124

Query: 547 VKTMLAKGYVLGKDALSKAKAFDESHQVSATAAEKVAEMSKRIGLTDKICAGVGAVKSVD 368
           VKTMLAKGYVL KDAL+KAK FDESHQVSATA  KV+E+S+RIGL++K+ AGV AVK VD
Sbjct: 125 VKTMLAKGYVLSKDALTKAKDFDESHQVSATATAKVSELSRRIGLSEKVSAGVKAVKYVD 184

Query: 367 EKYGXXXXXXXXXXXXXXXXXXXXXXXXXXSYFSMGALWVSXXXXXXXXXXXXLGSHGNK 188
           + Y                           SYFS GALWVS            LG+ G +
Sbjct: 185 QMYNVSGTTKAAASATGRSVASATSTVVNNSYFSKGALWVSGALTRAAQVTSDLGTRGGR 244


>emb|CBI31989.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  272 bits (695), Expect = 1e-70
 Identities = 146/243 (60%), Positives = 163/243 (67%), Gaps = 1/243 (0%)
 Frame = -3

Query: 919 MSPTGYIAEVTGLSPNATEKDVYDFFAFSGSVEHVEIVRFGDY-ACTAYVTFKDSYGLEN 743
           MS +G+  EVT LSP  TEKDVYDFFAFSG++E VE+VR  D  ACTAYVTFKD+Y +E 
Sbjct: 1   MSTSGHTIEVTSLSPKVTEKDVYDFFAFSGAIERVEMVRSADECACTAYVTFKDAYAVET 60

Query: 742 AALLSGATIVDQRVCITRWGQNEDEFNIWNRSSWKIEEETSSSHTPNENPSINTAGEAVT 563
           A LLSGATIVDQRVCITRWG  EDEF++WNR +WK+E+ETSS+H P  N S   AGEAVT
Sbjct: 61  AVLLSGATIVDQRVCITRWGHYEDEFDLWNRPTWKLEDETSSTHAPETNRSYPDAGEAVT 120

Query: 562 MAQEVVKTMLAKGYVLGKDALSKAKAFDESHQVSATAAEKVAEMSKRIGLTDKICAGVGA 383
           MAQEVVKTMLAKGY+LGKDALSKAK FDESHQ SATA   VAE+S+RIGLTDK CA   A
Sbjct: 121 MAQEVVKTMLAKGYILGKDALSKAKTFDESHQFSATAVATVAELSQRIGLTDKFCAAAAA 180

Query: 382 VKSVDEKYGXXXXXXXXXXXXXXXXXXXXXXXXXXSYFSMGALWVSXXXXXXXXXXXXLG 203
              V+                               YFS GALWVS            LG
Sbjct: 181 TTVVNSS-----------------------------YFSKGALWVSDALSRAAKAAGDLG 211

Query: 202 SHG 194
           SHG
Sbjct: 212 SHG 214


>ref|XP_002520109.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540601|gb|EEF42164.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 245

 Score =  271 bits (693), Expect = 2e-70
 Identities = 138/225 (61%), Positives = 164/225 (72%)
 Frame = -3

Query: 919 MSPTGYIAEVTGLSPNATEKDVYDFFAFSGSVEHVEIVRFGDYACTAYVTFKDSYGLENA 740
           M   G+  EVTGLSP+ TEKD+YDFF+FSGS+EHVEIVR GDYACTAYVTFK++Y  E A
Sbjct: 1   MDQDGHAVEVTGLSPSTTEKDLYDFFSFSGSIEHVEIVRCGDYACTAYVTFKNAYSQETA 60

Query: 739 ALLSGATIVDQRVCITRWGQNEDEFNIWNRSSWKIEEETSSSHTPNENPSINTAGEAVTM 560
            LLSGATI+++RVCITRWG   DEF++WN  S ++E+E  S+H P  +  + +AGEAV M
Sbjct: 61  VLLSGATILEERVCITRWGHYIDEFDLWNTPSLRVEDERESTHPPERSQYVPSAGEAVIM 120

Query: 559 AQEVVKTMLAKGYVLGKDALSKAKAFDESHQVSATAAEKVAEMSKRIGLTDKICAGVGAV 380
           AQEVVK M+AKGYVLGKD LSKAKAFDESHQV+ATAA KVAE ++RIGL DKI AG+ A+
Sbjct: 121 AQEVVKNMVAKGYVLGKDTLSKAKAFDESHQVTATAAAKVAEFTERIGLADKIFAGMEAM 180

Query: 379 KSVDEKYGXXXXXXXXXXXXXXXXXXXXXXXXXXSYFSMGALWVS 245
           KSVD+KY                           SYFS GALWVS
Sbjct: 181 KSVDQKYHVSDMTKSAVSATGRTAVAAASTVVNSSYFSKGALWVS 225


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