BLASTX nr result

ID: Cimicifuga21_contig00005584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005584
         (1412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34627.3| unnamed protein product [Vitis vinifera]              226   1e-56
ref|XP_002300524.1| NAC domain protein, IPR003441 [Populus trich...   219   1e-54
gb|ADL36810.1| NAC domain class transcription factor [Malus x do...   215   2e-53
ref|XP_002317040.1| NAC domain protein, IPR003441 [Populus trich...   209   2e-51
emb|CBI23105.3| unnamed protein product [Vitis vinifera]              202   2e-49

>emb|CBI34627.3| unnamed protein product [Vitis vinifera]
          Length = 632

 Score =  226 bits (575), Expect = 1e-56
 Identities = 158/401 (39%), Positives = 200/401 (49%), Gaps = 17/401 (4%)
 Frame = +2

Query: 260  KPKIHGILNSEVEAIREVDVCKLEPWDLPAKSVIKNDDPEWFFFCPHDQKYPKGRRSNRA 439
            K KI G  +SEVE IRE+DVCK EPWDLP  S+IK DDPEWFFFCP D+KYP GRRSNRA
Sbjct: 28   KLKIEG-RHSEVEVIRELDVCKWEPWDLPGLSMIKADDPEWFFFCPRDRKYPNGRRSNRA 86

Query: 440  TKKGYWKATGKDRTIKSRTPGKKLIGTKKTLVFHIGRAPGGQRTCWIMHEYRM----SSS 607
            T  GYWKATGKDRTIKSR      IG KKTLVF+ GRAP GQRT WI HEYR+    S S
Sbjct: 87   TDAGYWKATGKDRTIKSRKSSAS-IGMKKTLVFYKGRAPKGQRTNWIFHEYRVIDSASDS 145

Query: 608  EEGSYVLCRLFNKEKEK---SNYDEIDPIGSSLTATNSSSPEFMPPEKELVQPSSELDIM 778
             +G+YVL RLF K  E+     YDE++P G S   T SS  +      +LVQ +   D  
Sbjct: 146  SQGAYVLFRLFYKPNERIDNPKYDEVEPTGLSPVTTKSSPGD---TSSDLVQETEMSD-- 200

Query: 779  QVGKNMTPYNSVLEKI--WLEDKSDKTTPNNSVPDQSYSNSCQASDVEDHGEVRAIETEA 952
                  TP     E    WL DKSD  TP   VP +S  N    SDVEDH      E E 
Sbjct: 201  ------TPTGGESENFERWLNDKSDNVTPTAPVPVESCCNGYIPSDVEDH----VAEVEE 250

Query: 953  HRGEYMGILKDLETLLQAPSPLNVNMPAGE-----ELSYVDPALASEFGNTHNKMLVQNG 1117
               E    L +            V  P  +       +Y+    +S+FG+    +  Q+G
Sbjct: 251  QVSEVYPPLGEDSRSYDGQIDCKVFSPESQLYPELATAYMGSPFSSDFGDGQTGLRFQDG 310

Query: 1118 EQDVVDDIESFLENSFCYQEFCL---LAVVENDPDCGSTYVRHQSRESVSAIQQSGESVF 1288
              +    +  F +  F   + C        +N      T V  Q     +       +  
Sbjct: 311  VSEPEVCLTEFWDEIFNNHDECSGEESNSKKNSAVGSETLVPGQVSLLPNRPHGDSHTKN 370

Query: 1289 GKDSSDTNNIVLHAQMQNALEINSINKIEDFLLDDPHAVVD 1411
            G  +SDT+  +  AQMQ   E+ +    +++++   H  +D
Sbjct: 371  GGSNSDTDTDM--AQMQYDPEMRASKWSDEYIVGKDHLQMD 409


>ref|XP_002300524.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222847782|gb|EEE85329.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 537

 Score =  219 bits (558), Expect = 1e-54
 Identities = 149/323 (46%), Positives = 185/323 (57%), Gaps = 17/323 (5%)
 Frame = +2

Query: 266  KIHGILNSEVEAIREVDVCKLEPWDLPAKSVIKNDDPEWFFFCPHDQKYPKGRRSNRATK 445
            KI+G  +SEVE I E+DVCK EPWDLP +SVIK DDPEWFFFCP D+KYP G RSNRAT 
Sbjct: 29   KING-RDSEVEVIPEIDVCKWEPWDLPGQSVIKTDDPEWFFFCPRDRKYPNGHRSNRATD 87

Query: 446  KGYWKATGKDRTIKSR--TPGKKLIGTKKTLVFHIGRAPGGQRTCWIMHEYRMSSSE--- 610
             GYWKATGKDRTIKSR       LIG KKTLVF+ GRAP G+RT WIMHEYR +  +   
Sbjct: 88   AGYWKATGKDRTIKSRKSAGNTTLIGMKKTLVFYRGRAPKGKRTNWIMHEYRPTEEDLDG 147

Query: 611  ----EGSYVLCRLFNKEKEKSN---YDEIDPIGSSLTATNSSSPEFMPPEKELVQPSSEL 769
                + ++VL RLF K +E++N   YDEI+ IG S TA  SS         +LVQ ++  
Sbjct: 148  TGPGQVAFVLFRLFRKPEERTNGVKYDEIEQIGYSPTAAKSSPDN---ASSDLVQETATS 204

Query: 770  DIMQVGKNMTPYNSVLEKIWLEDKSDKTTPNNSVPDQSYSNSCQASDVEDH-GEVRAIET 946
            D M  GK          K+WL + SD  T N+  P    SN    SD+ED   E  A+E 
Sbjct: 205  D-MHSGKQSEDI-----KMWLTE-SDNVTANSVGPVDICSNRHATSDIEDQVPEATAVEA 257

Query: 947  EAHRGEYMGILKDLETLL--QAPSPLNVNMPAGEELSYVDPALASEFGNTHNKMLVQNG- 1117
                 E   I + +   L  +  SP+  ++PA +   Y+D   AS+FGN  N    Q+  
Sbjct: 258  CPLLDESSLIHEPVSGELDREVFSPVQSHIPA-DLGCYIDSPYASDFGNDQNGFPFQDVS 316

Query: 1118 -EQDVVDDIESFLENSFCYQEFC 1183
             EQDV   I   L+  F   + C
Sbjct: 317  IEQDV--SITELLDRFFNNHDEC 337


>gb|ADL36810.1| NAC domain class transcription factor [Malus x domestica]
          Length = 850

 Score =  215 bits (548), Expect = 2e-53
 Identities = 136/312 (43%), Positives = 176/312 (56%), Gaps = 24/312 (7%)
 Frame = +2

Query: 266  KIHGILNSEVEAIREVDVCKLEPWDLPAKSVIKNDDPEWFFFCPHDQKYPKGRRSNRATK 445
            KI+G  +SEV  I E+DVC+ EPWDLP  SVIK+DD EWFFFCP D+KYP G RSNRAT 
Sbjct: 30   KING-RDSEVRVIPEIDVCRWEPWDLPKLSVIKSDDQEWFFFCPRDRKYPNGHRSNRATD 88

Query: 446  KGYWKATGKDRTIKSR-----TPGKKLIGTKKTLVFHIGRAPGGQRTCWIMHEYRMSSSE 610
             GYWKATGKDRTIKSR     +     +G KKTLVF+ GRAP G+RT WIMHEYR +  E
Sbjct: 89   AGYWKATGKDRTIKSRQCKSASNSNGQVGMKKTLVFYRGRAPKGERTSWIMHEYRATQKE 148

Query: 611  -------EGSYVLCRLFNKEKEKSN---YDEIDPIGSSLTATNSSSPEFMPPEKELVQPS 760
                   +G++VLCRLF+K +EK++   YDE++  G S T T SS  E      +++Q +
Sbjct: 149  LDGTGPGQGAFVLCRLFHKPEEKADVPKYDEVEQTGLSPTTTKSSPDE----SSDIIQET 204

Query: 761  SELDIMQVGKNMTPYNSVLEKIWLEDKSDKTTPNNSVPDQSYSNSCQASDVEDHGEVR-- 934
            +  +I   G+N      ++   WL D SD  TP+   P     +   ASDVED G V   
Sbjct: 205  ATSEIQ--GENQA--EGIMR--WLTDNSDNVTPDALPP---LPDIFMASDVEDQGAVETG 255

Query: 935  -----AIETEAHRGEYMGILKDLETLLQAPSPLNVNMPAGEELSYVDPALASEFGNTHNK 1099
                  IE      E +G   D +      S +N  +       ++     S+FGN  N 
Sbjct: 256  IQGHLTIEENPAFYESLGGPIDCKVFTPLHSQINAELE-----HFMGSPFTSDFGNYDNG 310

Query: 1100 MLVQNG--EQDV 1129
            +  Q+G  EQDV
Sbjct: 311  LYFQDGTCEQDV 322


>ref|XP_002317040.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222860105|gb|EEE97652.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 429

 Score =  209 bits (531), Expect = 2e-51
 Identities = 138/314 (43%), Positives = 170/314 (54%), Gaps = 16/314 (5%)
 Frame = +2

Query: 266  KIHGILNSEVEAIREVDVCKLEPWDLPAKSVIKNDDPEWFFFCPHDQKYPKGRRSNRATK 445
            KI+G  +SEVE I E+D+CK EPWDLP  SVIK DDPEWFFFCP D+KYP G RSNRAT+
Sbjct: 27   KING-RDSEVEVIPEIDICKWEPWDLPGLSVIKTDDPEWFFFCPRDRKYPNGHRSNRATE 85

Query: 446  KGYWKATGKDRTIKSR--TPGKKLIGTKKTLVFHIGRAPGGQRTCWIMHEYRMSSSE--- 610
             GYWKATGKDRTIKSR       LIG KKTLVF+ GRAP G+RT W+MHEYR +  +   
Sbjct: 86   AGYWKATGKDRTIKSRKSAGNTTLIGMKKTLVFYRGRAPNGKRTNWVMHEYRPTEKDLDG 145

Query: 611  ----EGSYVLCRLFNKEKEKSN---YDEIDPIGSSLTATNSSSPEFMPPEKELVQPSSEL 769
                +G++VL RLF K +E+ +   YDEI+    S TA  SS  +      +LVQ ++  
Sbjct: 146  TGPGQGAFVLFRLFRKPEERPSIVKYDEIEQTAYSTTAAKSSPDD---ASSDLVQETATS 202

Query: 770  DIMQVGKNMTPYNSVLEKIWLEDKSDKTTPNNSVPDQSYSNSCQASDVEDHGEVRAIETE 949
            + M  GK          K+W   +SD  T N  VP  S SNS   SDVED          
Sbjct: 203  E-MSSGKQPEDI-----KMW-STESDNMTSNAVVPIDSCSNSRATSDVED---------- 245

Query: 950  AHRGEYMGILKDLETLLQAPSPLNVNMPAGEELSYVDPALASEFGNTHNKMLVQNG--EQ 1123
                             Q P  L           Y+D   AS+FGN  N     +G  EQ
Sbjct: 246  -----------------QIPVDLGY---------YMDSPYASDFGNNQNGFSFLDGTSEQ 279

Query: 1124 DV--VDDIESFLEN 1159
            DV   + ++ +L N
Sbjct: 280  DVSLTELLDDYLNN 293


>emb|CBI23105.3| unnamed protein product [Vitis vinifera]
          Length = 578

 Score =  202 bits (514), Expect = 2e-49
 Identities = 133/313 (42%), Positives = 168/313 (53%), Gaps = 18/313 (5%)
 Frame = +2

Query: 284  NSEVEAIREVDVCKLEPWDLPAKSVIKNDDPEWFFFCPHDQKYPKGRRSNRATKKGYWKA 463
            + EV  IRE+DVCK EPWDLP  S I+ +D EWFFFCP D+KYP G R NRAT  GYWKA
Sbjct: 35   DEEVRVIREIDVCKWEPWDLPDLSEIRTNDMEWFFFCPRDRKYPNGHRLNRATAAGYWKA 94

Query: 464  TGKDRTIKSRTPGKKLIGTKKTLVFHIGRAPGGQRTCWIMHEYRMSSSE-------EGSY 622
            TG+DR IKS+T   +L+G KKTLVFH GRAP G+RT W+MHEYR ++ E       + ++
Sbjct: 95   TGRDRQIKSKT---RLVGMKKTLVFHTGRAPHGKRTVWVMHEYRATAKELDGTHPGQAAF 151

Query: 623  VLCRLFNKEKEK---SNYDEIDPIGSSLTATNSSSPEFMPPEKELVQPSSELDIMQVGKN 793
            VLCRLF K+ EK   SN DEI+P   S T  NS            V P  + +  Q G  
Sbjct: 152  VLCRLFKKQDEKAEGSNPDEIEPTVPSPTPANSPEETEFEVALPQVAPVEKQEEEQPG-- 209

Query: 794  MTPYNSVLEKIWLEDKSDKTTPNNSVPDQSYSNSCQASDVEDH-GEVRAIETEAHRGEYM 970
                     +    +  D+ T  +SVP    SN   A D ED   ++ A E +    E  
Sbjct: 210  -------FAEGCPGENPDEMTAESSVPVGFCSNPLNAYDEEDSLAKLTAAEVDPSLQEDF 262

Query: 971  GILKD--LETL-LQAPSPLNVNMPAGEELSYVDPALASEFGNTH---NKMLVQNGEQDVV 1132
            G  +D  LE L  Q  SP++     G E SYV   +   F N H   N+      + DV 
Sbjct: 263  GFFQDQMLEQLDYQLFSPVHSQWHMGLE-SYVSYPVTGNFSNGHNGENEYGTNEPDPDVT 321

Query: 1133 DDIESFL-ENSFC 1168
            + +ES L EN  C
Sbjct: 322  EFLESVLKENGSC 334


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