BLASTX nr result

ID: Cimicifuga21_contig00005571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005571
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331826.1| multidrug resistance protein ABC transporter...   243   9e-63
ref|XP_002318362.1| multidrug resistance protein ABC transporter...   238   3e-61
ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   234   7e-60
ref|XP_003536438.1| PREDICTED: ABC transporter C family member 1...   233   1e-59
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   229   1e-58

>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1423

 Score =  243 bits (621), Expect = 9e-63
 Identities = 120/155 (77%), Positives = 136/155 (87%)
 Frame = +3

Query: 3   LSAVQLRKAYNGLLFWSSPVLVSAATFGACYILGVPLYASNVFTFVATLRLVQEPIRSIP 182
           LSAVQ RKAYNG LFWSSPVLVS ATFGACY L +PL+A+NVFTFVATLRLVQ+PIRSIP
Sbjct: 467 LSAVQTRKAYNGFLFWSSPVLVSTATFGACYFLKIPLHANNVFTFVATLRLVQDPIRSIP 526

Query: 183 DVVGVVIQARVALVRIIKFLEASELQNETVRHKCNMKELKHSIYIKSADFSWEENASKPT 362
           DV+GVVIQA+VA  RI+KFLEA ELQN  VRHK NM  + H++ IKSA+FSWEEN+SKPT
Sbjct: 527 DVIGVVIQAKVAFARIVKFLEAPELQNGNVRHKRNMGSVDHAVLIKSANFSWEENSSKPT 586

Query: 363 LININIEVKPGEKVAICGEVGSGKSTFLAAILGEV 467
           L N++  ++PGEKVAICGEVGSGKST LAAILGEV
Sbjct: 587 LRNVSFGIRPGEKVAICGEVGSGKSTLLAAILGEV 621


>ref|XP_002318362.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222859035|gb|EEE96582.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1240

 Score =  238 bits (608), Expect = 3e-61
 Identities = 115/155 (74%), Positives = 136/155 (87%)
 Frame = +3

Query: 3   LSAVQLRKAYNGLLFWSSPVLVSAATFGACYILGVPLYASNVFTFVATLRLVQEPIRSIP 182
           LSAVQ+RKAYNG LFWSSPVLVSA TFGACY + +PL+A+NVFTFVATLRLVQ+PIRSIP
Sbjct: 291 LSAVQMRKAYNGFLFWSSPVLVSAVTFGACYFMKIPLHANNVFTFVATLRLVQDPIRSIP 350

Query: 183 DVVGVVIQARVALVRIIKFLEASELQNETVRHKCNMKELKHSIYIKSADFSWEENASKPT 362
           DV+GVVIQA+VA  RI+KFLEA ELQ+  V+ + N   + HS+ IKSADFSWEEN+SKPT
Sbjct: 351 DVIGVVIQAKVAFARIVKFLEAPELQSRNVQQRRNTGSVNHSVLIKSADFSWEENSSKPT 410

Query: 363 LININIEVKPGEKVAICGEVGSGKSTFLAAILGEV 467
           L N+++++ PGEKVA+CGEVGSGKST LAAILGEV
Sbjct: 411 LRNVSLKIMPGEKVAVCGEVGSGKSTLLAAILGEV 445


>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223547514|gb|EEF49009.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  234 bits (596), Expect = 7e-60
 Identities = 115/155 (74%), Positives = 135/155 (87%)
 Frame = +3

Query: 3   LSAVQLRKAYNGLLFWSSPVLVSAATFGACYILGVPLYASNVFTFVATLRLVQEPIRSIP 182
           LSAVQLRKAYN  LFWSSP+LVSAATFGACY L VPL+A+NVFTFVATLRLVQ+PIR+IP
Sbjct: 524 LSAVQLRKAYNSFLFWSSPLLVSAATFGACYFLKVPLHANNVFTFVATLRLVQDPIRTIP 583

Query: 183 DVVGVVIQARVALVRIIKFLEASELQNETVRHKCNMKELKHSIYIKSADFSWEENASKPT 362
           DV+GVVIQA+VA  RI+KFLEA ELQN  ++ K +M    H+  I SA+FSWEEN+SKPT
Sbjct: 584 DVIGVVIQAKVAFARILKFLEAPELQNGNLQQKQSMDSANHATLITSANFSWEENSSKPT 643

Query: 363 LININIEVKPGEKVAICGEVGSGKSTFLAAILGEV 467
           L N+N+E++PG+KVAICGEVGSGKST LA+ILGEV
Sbjct: 644 LRNVNLEIRPGDKVAICGEVGSGKSTLLASILGEV 678


>ref|XP_003536438.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1479

 Score =  233 bits (594), Expect = 1e-59
 Identities = 117/155 (75%), Positives = 134/155 (86%)
 Frame = +3

Query: 3   LSAVQLRKAYNGLLFWSSPVLVSAATFGACYILGVPLYASNVFTFVATLRLVQEPIRSIP 182
           LSAVQLRKAYN  LFWSSPVLVSAA+FGACY L VPL+A+NVFTFVATLRLVQ+PIR+IP
Sbjct: 522 LSAVQLRKAYNTFLFWSSPVLVSAASFGACYFLNVPLHANNVFTFVATLRLVQDPIRTIP 581

Query: 183 DVVGVVIQARVALVRIIKFLEASELQNETVRHKCNMKELKHSIYIKSADFSWEENASKPT 362
           DV+GVVIQA+VA  RI+KFLEA ELQ+  +  +C  +  + SI IKSADFSWE+N SKPT
Sbjct: 582 DVIGVVIQAKVAFARIVKFLEAPELQSVNITQRCLNENKRGSILIKSADFSWEDNVSKPT 641

Query: 363 LININIEVKPGEKVAICGEVGSGKSTFLAAILGEV 467
           L NIN+EV+PG+KVAICGEVGSGKST LAAIL EV
Sbjct: 642 LRNINLEVRPGQKVAICGEVGSGKSTLLAAILREV 676


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  229 bits (585), Expect = 1e-58
 Identities = 115/155 (74%), Positives = 132/155 (85%)
 Frame = +3

Query: 3    LSAVQLRKAYNGLLFWSSPVLVSAATFGACYILGVPLYASNVFTFVATLRLVQEPIRSIP 182
            LS VQLRK YNG LFWSSPVLVSAATFGAC+ LG+PL ASNVFTFVA LRLVQ+PIRSIP
Sbjct: 576  LSGVQLRKGYNGFLFWSSPVLVSAATFGACFFLGIPLNASNVFTFVAALRLVQDPIRSIP 635

Query: 183  DVVGVVIQARVALVRIIKFLEASELQNETVRHKCNMKELKHSIYIKSADFSWEENASKPT 362
            DV+GVVIQA+VA  RI+KFLEA ELQ   VR K N++ + ++I IKSA+FSWEE  SK T
Sbjct: 636  DVIGVVIQAKVAFARIVKFLEAPELQTSNVRQKSNIENISNAISIKSANFSWEEKLSKST 695

Query: 363  LININIEVKPGEKVAICGEVGSGKSTFLAAILGEV 467
            L +I++EV+ GEKVAICGEVGSGKST LAAILGE+
Sbjct: 696  LRDISLEVRTGEKVAICGEVGSGKSTLLAAILGEI 730


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