BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005549
         (1994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containin...   603   e-170
ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containin...   602   e-170
ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ric...   597   e-168
ref|NP_200011.1| zinc finger CCCH domain-containing protein 63 [...   597   e-168
ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containin...   594   e-167

>ref|XP_003548225.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
            [Glycine max]
          Length = 427

 Score =  603 bits (1556), Expect = e-170
 Identities = 274/425 (64%), Positives = 342/425 (80%)
 Frame = -2

Query: 1666 MDLDNGSKRVFNRLGGPPQEASPKVCYHWRAGRCNRNPCPYLHSELPQQGNSKRSNGVPE 1487
            MD+D G+KRV+NRLGG  +    KVC+HW+AG+CNR PCP+LHSELP   NS  +NG   
Sbjct: 1    MDVDGGNKRVYNRLGGDAKHQ--KVCFHWQAGKCNRYPCPFLHSELP--ANSHHANGASS 56

Query: 1486 DRSFSGQGFARRKPNPNFNSSQQQXXXXXXXXXXXXXXXXXRPTPKVQDKVCHYWIEGKC 1307
             R++   GF+  + +P+FN++  +                        +KVC+YWI+G C
Sbjct: 57   KRAYDNSGFSGPRRSPSFNNTWGRGGSRGGGGAGAGAGRGVVVK---AEKVCNYWIQGNC 113

Query: 1306 TFGDKCRFLHRWFSSDNFTMVTQLLGHEKVISAIAFPSGSDKLYSGSKDESVRVWDCQTG 1127
            ++G++C+FLH W   D F+++TQL GH+K +SAIAFPSGSDKLY+GS DE+ R+WDCQ+G
Sbjct: 114  SYGERCKFLHTWSVGDGFSLLTQLEGHQKAVSAIAFPSGSDKLYTGSTDETARIWDCQSG 173

Query: 1126 QCAGVVNLGGEIGCMMTEGPWIFVGIPNCVKAWNTQTNTDLSLSGPVGQVYTLVVGNGML 947
            +C GV+NLGGE+GCM++EGPW+FVGIPN VKAWNTQ  ++LSL+GPVGQVY LVV N ML
Sbjct: 174  KCVGVINLGGEVGCMISEGPWVFVGIPNFVKAWNTQNLSELSLNGPVGQVYALVVNNDML 233

Query: 946  FAGAQDGNILAWRFSATTNSFEPTASLKGHNLAVVSLVVGANRLYSGSMDCTIRVWDLET 767
            FAG QDG+ILAW+F+  TN FEP ASLKGH+  VVSLVVGANRLYSGSMD TIRVW+LET
Sbjct: 234  FAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIRVWNLET 293

Query: 766  LQCIQTLTEHTSVVMSVLCWEQFLLSCSLDRTIKVWAATESGSLEVTYTHKEEHGVLALC 587
            LQC+QTLTEHTSVVMSVLCW+QFLLSCSLD+T+KVW ATESG+LEVTYTH EE+G+L LC
Sbjct: 294  LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYTHNEENGILTLC 353

Query: 586  GMHDAETKPVLMCSCNNNTVHLYDLPSFNERGKIFSKEEVRAMEIGPGGLFFTGDGTGEL 407
            GMHD++ KP+L+C+CN+NTVHLYDLPSF ERGKI +K+EVRA++IGP G+FFTGDGTGE+
Sbjct: 354  GMHDSQGKPILLCACNDNTVHLYDLPSFAERGKILTKKEVRAIQIGPNGIFFTGDGTGEV 413

Query: 406  SVWKW 392
             VW W
Sbjct: 414  RVWNW 418


>ref|XP_003534022.1| PREDICTED: zinc finger CCCH domain-containing protein 48-like
            [Glycine max]
          Length = 426

 Score =  602 bits (1553), Expect = e-170
 Identities = 273/425 (64%), Positives = 340/425 (80%)
 Frame = -2

Query: 1666 MDLDNGSKRVFNRLGGPPQEASPKVCYHWRAGRCNRNPCPYLHSELPQQGNSKRSNGVPE 1487
            MD+D G+KRV+NRLGG  +    KVCYHW+AG+CNR PCP+LHSE P   NS  +NG   
Sbjct: 1    MDVDGGNKRVYNRLGGDAKHQ--KVCYHWQAGKCNRYPCPFLHSESP--ANSHHANGTSS 56

Query: 1486 DRSFSGQGFARRKPNPNFNSSQQQXXXXXXXXXXXXXXXXXRPTPKVQDKVCHYWIEGKC 1307
             R++   GF+  + +PNFN++  +                        +KVC+YWI+G C
Sbjct: 57   KRTYDNSGFSGPRRSPNFNNTWGRGGGRGGGGGGGAGRGVVVKA----EKVCNYWIQGSC 112

Query: 1306 TFGDKCRFLHRWFSSDNFTMVTQLLGHEKVISAIAFPSGSDKLYSGSKDESVRVWDCQTG 1127
            ++G++C+FLH W   D F+++TQL GH+K +SAIAFPSGSDKLY+GS DE+ R+WDCQ G
Sbjct: 113  SYGERCKFLHSWSVGDGFSLLTQLEGHQKAVSAIAFPSGSDKLYTGSTDETARIWDCQCG 172

Query: 1126 QCAGVVNLGGEIGCMMTEGPWIFVGIPNCVKAWNTQTNTDLSLSGPVGQVYTLVVGNGML 947
            +C GV+NLGGE+GCM++EGPW+FVGIPN VKAWNTQ  ++LSL+GPVGQVY LVV N ML
Sbjct: 173  KCVGVINLGGEVGCMISEGPWVFVGIPNFVKAWNTQNLSELSLNGPVGQVYALVVNNDML 232

Query: 946  FAGAQDGNILAWRFSATTNSFEPTASLKGHNLAVVSLVVGANRLYSGSMDCTIRVWDLET 767
            FAG QDG+ILAW+F+  TN FEP ASLKGH+  VVSLVVGANRLYSGSMD TI+VW+LET
Sbjct: 233  FAGTQDGSILAWKFNVATNCFEPAASLKGHSRGVVSLVVGANRLYSGSMDNTIKVWNLET 292

Query: 766  LQCIQTLTEHTSVVMSVLCWEQFLLSCSLDRTIKVWAATESGSLEVTYTHKEEHGVLALC 587
            LQC+QTLTEHTSVVMSVLCW+QFLLSCSLD+T+KVW ATESG+LEVTY+H EE+G+L LC
Sbjct: 293  LQCLQTLTEHTSVVMSVLCWDQFLLSCSLDKTVKVWYATESGNLEVTYSHNEENGILTLC 352

Query: 586  GMHDAETKPVLMCSCNNNTVHLYDLPSFNERGKIFSKEEVRAMEIGPGGLFFTGDGTGEL 407
            GMHD++ KP+L+C+CN+NTVHLYDLPSF ERGKI +K+EVRA++IGP G+FFTGDGTGE+
Sbjct: 353  GMHDSQGKPILLCACNDNTVHLYDLPSFAERGKILTKQEVRAIQIGPNGIFFTGDGTGEV 412

Query: 406  SVWKW 392
             VW W
Sbjct: 413  RVWNW 417


>ref|XP_002510854.1| F-box and wd40 domain protein, putative [Ricinus communis]
            gi|223549969|gb|EEF51456.1| F-box and wd40 domain
            protein, putative [Ricinus communis]
          Length = 445

 Score =  597 bits (1540), Expect = e-168
 Identities = 289/455 (63%), Positives = 345/455 (75%), Gaps = 24/455 (5%)
 Frame = -2

Query: 1666 MDLD-----NGSKRVFNRLGGPPQEASP------KVCYHWRAGRCNRNPCPYLHSELP-- 1526
            MDLD       S RVFNRLGG    +S       KVC+HWRAGRCNR PCPYLH ELP  
Sbjct: 1    MDLDAQGGNTNSNRVFNRLGGAQLSSSTNDPRQQKVCHHWRAGRCNRFPCPYLHRELPPP 60

Query: 1525 -----QQGNSKRSNGVPE------DRSFSGQGFARRKPNPNFNSSQQQXXXXXXXXXXXX 1379
                   G+S  +N  P       D  FSG   +RR  N N  SS  +            
Sbjct: 61   PPPHGSNGHSSSNNNAPSKRGFSNDSGFSGPSGSRRSGNFNNASSWGRVGNNSNKVL--- 117

Query: 1378 XXXXXRPTPKVQDKVCHYWIEGKCTFGDKCRFLHRWFSSDNFTMVTQLLGHEKVISAIAF 1199
                     +  +KVC++W++GKC++GDKCRFLH W   ++F+++TQL GH+KV++ IA 
Sbjct: 118  ---------RKTEKVCNFWVQGKCSYGDKCRFLHSWNLGESFSLLTQLDGHQKVVTGIAL 168

Query: 1198 PSGSDKLYSGSKDESVRVWDCQTGQCAGVVNLGGEIGCMMTEGPWIFVGIPNCVKAWNTQ 1019
            PSGSDKLY+GSKDE+VRVWDCQ+GQC  V+ LGGE+GCM++EGPWIFVGIPN VKAWNTQ
Sbjct: 169  PSGSDKLYTGSKDETVRVWDCQSGQCMAVIQLGGEVGCMISEGPWIFVGIPNVVKAWNTQ 228

Query: 1018 TNTDLSLSGPVGQVYTLVVGNGMLFAGAQDGNILAWRFSATTNSFEPTASLKGHNLAVVS 839
            TNTDLSL+GPVGQVY LVVGN +LFAG QDG IL W+++A T +FEP ASL GH +AVVS
Sbjct: 229  TNTDLSLTGPVGQVYALVVGNDLLFAGTQDGAILVWKYNAATFNFEPAASLPGHTVAVVS 288

Query: 838  LVVGANRLYSGSMDCTIRVWDLETLQCIQTLTEHTSVVMSVLCWEQFLLSCSLDRTIKVW 659
            LVVGANRLYSGSMD +IRVW+LETLQC+QTLT+HTSVVMSVLCW+QFLLSCSLD+ IKVW
Sbjct: 289  LVVGANRLYSGSMDHSIRVWNLETLQCVQTLTDHTSVVMSVLCWDQFLLSCSLDQKIKVW 348

Query: 658  AATESGSLEVTYTHKEEHGVLALCGMHDAETKPVLMCSCNNNTVHLYDLPSFNERGKIFS 479
            AATESG+L+VTYTH EEHG+L LCGMHD E KPVL+CSCN+N+V L DLPSF+ERGKIF+
Sbjct: 349  AATESGNLDVTYTHNEEHGLLTLCGMHDLEGKPVLLCSCNDNSVRLLDLPSFSERGKIFA 408

Query: 478  KEEVRAMEIGPGGLFFTGDGTGELSVWKWSETPTA 374
            K+E+RA++ GPGGLFFTGDGTG++ VWKW   PTA
Sbjct: 409  KQEIRAIQTGPGGLFFTGDGTGQVRVWKWVAEPTA 443


>ref|NP_200011.1| zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana]
            gi|10177733|dbj|BAB11046.1| unnamed protein product
            [Arabidopsis thaliana] gi|332008771|gb|AED96154.1| zinc
            finger CCCH domain-containing protein 63 [Arabidopsis
            thaliana]
          Length = 437

 Score =  597 bits (1539), Expect = e-168
 Identities = 279/444 (62%), Positives = 341/444 (76%), Gaps = 14/444 (3%)
 Frame = -2

Query: 1663 DLDNGSKRVFNRLGG--------PPQEASPKVCYHWRAGRCNRNPCPYLHSELPQ----- 1523
            DL+ G+KRVFNRLGG         P +   KVC+HWRAGRCNR+PCPYLH ELP      
Sbjct: 4    DLNGGNKRVFNRLGGGGGSTRPMAPTDTRQKVCFHWRAGRCNRSPCPYLHRELPGPGPGQ 63

Query: 1522 -QGNSKRSNGVPEDRSFSGQGFARRKPNPNFNSSQQQXXXXXXXXXXXXXXXXXRPTPKV 1346
             QG    +  V E+  F+G    RR P  N NSS                      T   
Sbjct: 64   GQGPGYTNKRVAEESGFAGPSH-RRGPGFNGNSSSSWGRFGGNR------------TVTK 110

Query: 1345 QDKVCHYWIEGKCTFGDKCRFLHRWFSSDNFTMVTQLLGHEKVISAIAFPSGSDKLYSGS 1166
             +KVC++W++G CT+GDKCR+LH W   ++F ++TQL GHEK++S IA PSGSDKLY+GS
Sbjct: 111  TEKVCNFWVDGNCTYGDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGS 170

Query: 1165 KDESVRVWDCQTGQCAGVVNLGGEIGCMMTEGPWIFVGIPNCVKAWNTQTNTDLSLSGPV 986
            KDE++RVWDC +GQC GV+ LGGEIGC+++EGPW+ VG+PN VKAWN +TN D SLSGPV
Sbjct: 171  KDETLRVWDCASGQCTGVLKLGGEIGCVLSEGPWLLVGMPNLVKAWNIETNADQSLSGPV 230

Query: 985  GQVYTLVVGNGMLFAGAQDGNILAWRFSATTNSFEPTASLKGHNLAVVSLVVGANRLYSG 806
            GQVY+LVVG  +LFAG QDG+ILAWR++A TN FEP+ASL GH LAVV+L VGANRLYSG
Sbjct: 231  GQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSG 290

Query: 805  SMDCTIRVWDLETLQCIQTLTEHTSVVMSVLCWEQFLLSCSLDRTIKVWAATESGSLEVT 626
            SMD TI+VW L+ LQCIQTLT+H+SVVMS++CW+QFLLSCSLD T+K+WAA E G+LEVT
Sbjct: 291  SMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVT 350

Query: 625  YTHKEEHGVLALCGMHDAETKPVLMCSCNNNTVHLYDLPSFNERGKIFSKEEVRAMEIGP 446
            YTHKEEHGVLALCG+HDAE KPVL+C+CN+NT+ LYDLPSF ERGKIF+K+E+RA++IGP
Sbjct: 351  YTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLRLYDLPSFTERGKIFAKQEIRAIQIGP 410

Query: 445  GGLFFTGDGTGELSVWKWSETPTA 374
            GG+FFTGDGTG++ VWKW   PTA
Sbjct: 411  GGIFFTGDGTGQVKVWKWCTEPTA 434


>ref|XP_002280396.1| PREDICTED: zinc finger CCCH domain-containing protein 48 [Vitis
            vinifera] gi|297741123|emb|CBI31854.3| unnamed protein
            product [Vitis vinifera]
          Length = 442

 Score =  594 bits (1531), Expect = e-167
 Identities = 289/446 (64%), Positives = 348/446 (78%), Gaps = 15/446 (3%)
 Frame = -2

Query: 1666 MDLD-NGSKRVFNRLGGPPQEASP-KVCYHWRAGRCNRNPCPYLHSELP----QQ----- 1520
            MD+D +G+KRVF RLG         KVCYHWRAGRCN+ PCPYLH ELP    QQ     
Sbjct: 1    MDVDEHGNKRVFQRLGASNDSGKQHKVCYHWRAGRCNKFPCPYLHRELPAPPPQQHQPFI 60

Query: 1519 ---GNSKRSN-GVPEDRSFSGQGFARRKPNPNFNSSQQQXXXXXXXXXXXXXXXXXRPTP 1352
                +SKR N GV +DRSFSG   ARR  +PNFN +  +                 R   
Sbjct: 61   SNGSSSKRPNQGVHDDRSFSG---ARR--SPNFNPTWGRVHGAGAGNRAQGSGAGNRVFR 115

Query: 1351 KVQDKVCHYWIEGKCTFGDKCRFLHRWFSSDNFTMVTQLLGHEKVISAIAFPSGSDKLYS 1172
            K++ K+C+YW++G C++G+KC+FLH W   D F+ +TQL GH+KV+S IA PSGSDKLY+
Sbjct: 116  KIE-KLCNYWLQGNCSYGEKCKFLHSWSVGDCFSSLTQLEGHQKVVSGIALPSGSDKLYT 174

Query: 1171 GSKDESVRVWDCQTGQCAGVVNLGGEIGCMMTEGPWIFVGIPNCVKAWNTQTNTDLSLSG 992
            GSKDE+VR+WDCQ+GQC GVVNLGGE+GCM++EGPW+FVGIPN VKAW+TQ NT+LSLSG
Sbjct: 175  GSKDETVRIWDCQSGQCTGVVNLGGEVGCMISEGPWLFVGIPNVVKAWHTQNNTELSLSG 234

Query: 991  PVGQVYTLVVGNGMLFAGAQDGNILAWRFSATTNSFEPTASLKGHNLAVVSLVVGANRLY 812
            P GQVY LVVGN +LFAG QDG ILAW+F+A +N FEP ASLKGH  +V++LVVGANRLY
Sbjct: 235  PTGQVYALVVGNDLLFAGVQDGAILAWKFNAVSNCFEPAASLKGHTQSVITLVVGANRLY 294

Query: 811  SGSMDCTIRVWDLETLQCIQTLTEHTSVVMSVLCWEQFLLSCSLDRTIKVWAATESGSLE 632
            SGSMD +IRVW+LE LQC+QTLTEHTSVVMS+LCW+QFLLSCSLD T+KVW ATESG+LE
Sbjct: 295  SGSMDRSIRVWNLENLQCLQTLTEHTSVVMSLLCWDQFLLSCSLDGTVKVWVATESGNLE 354

Query: 631  VTYTHKEEHGVLALCGMHDAETKPVLMCSCNNNTVHLYDLPSFNERGKIFSKEEVRAMEI 452
            VTYTH EE GVL LCGMHD E KPVL+CSCN+NTV +YDLPSF+ERGKIF++E +RA++I
Sbjct: 355  VTYTHNEEQGVLYLCGMHDPEAKPVLLCSCNDNTVRVYDLPSFSERGKIFAREGIRAIQI 414

Query: 451  GPGGLFFTGDGTGELSVWKWSETPTA 374
            GPGGLFFTGDG+G++ VW WS    A
Sbjct: 415  GPGGLFFTGDGSGQVRVWNWSTEAAA 440