BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005509
         (2434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   749   0.0  
ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-bi...   748   0.0  
emb|CBI23009.3| unnamed protein product [Vitis vinifera]              746   0.0  
ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subun...   744   0.0  
ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arab...   709   0.0  

>ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            isoform 1 [Vitis vinifera]
          Length = 583

 Score =  749 bits (1933), Expect = 0.0
 Identities = 407/587 (69%), Positives = 454/587 (77%), Gaps = 31/587 (5%)
 Frame = -2

Query: 2196 MAAALRSKSFKKIASTTTVSQSRYFVLNHMHIGRHRTKWVDE-------FSAKMMPYRLN 2038
            MAAALRSKS ++ A   T SQ RYF+LNHMH GR    ++         F+    PY   
Sbjct: 1    MAAALRSKSSRETA-LLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPYHFT 59

Query: 2037 LFKMAYFQGDFDDKGGKLCNLSSFKSYG------------------GEPPEFWQPPGGGI 1912
             FK    +G+  DKG +  +   F   G                  G+PPE W   G GI
Sbjct: 60   SFKPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GDGI 117

Query: 1911 TVRSAVPDGNIVRXXXXXXXXXXXXXXXXXXSKDGCWGGANMGDDIPTPKEICKGLDKFV 1732
             VR      N+VR                  SKD  WGG+N+G + PTPKEIC+GLDKFV
Sbjct: 118  VVRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKFV 177

Query: 1731 IGQERAKKVLSVAVYNHYKRIYHESQQKSAEDSTSSDA-----NDSVELEKSNVLVMGPT 1567
            IGQERAKKVLSVAVYNHYKRIYH+S QK   + TS D      NDSVELEKSN+L+MGPT
Sbjct: 178  IGQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSDDKAEATDNDSVELEKSNILLMGPT 237

Query: 1566 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVAEYNVEAAQQGIV 1387
            GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVA+YNV AAQQGIV
Sbjct: 238  GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIV 297

Query: 1386 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTK 1207
            YIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTK
Sbjct: 298  YIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTK 357

Query: 1206 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGLTNAAITSSLLETVESSDLI 1027
            DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGG T+AA+ SSLLETVESSDLI
Sbjct: 358  DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDLI 417

Query: 1026 AYGLIPEFIGRFPVLVSLSALSEDQLVQVLTEPKNALGKQYKKMFQMNGVKLHFTEAALR 847
            +YGLIPEF+GRFP+LVSLSAL+E+QLV+VLTEPKNALGKQYKKMFQMNGVKLHFT+ ALR
Sbjct: 418  SYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALR 477

Query: 846  LIAKKTMSRSTGARGLRSLLENILMEAMYEIPDLRSGNERIDAVVVDEEAVGSIEGSVSG 667
            LI++K MS++TGARGLRS+LENILM AMYEIPD+R+GN+ IDAVVVD+EAVGS +G   G
Sbjct: 478  LISRKAMSKNTGARGLRSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGS-DGHGFG 536

Query: 666  AKILYGDDALELYLSQHKLKDAEVTQDG-TERVPEVEPELPSIVVSM 529
            AKILYG  AL+ YLSQHKLK+ E   +G ++   E E E+PSIV SM
Sbjct: 537  AKILYGKGALDCYLSQHKLKETETPMEGSSDGEAEAEAEIPSIVASM 583


>ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            isoform 2 [Vitis vinifera]
          Length = 577

 Score =  748 bits (1932), Expect = 0.0
 Identities = 405/582 (69%), Positives = 455/582 (78%), Gaps = 26/582 (4%)
 Frame = -2

Query: 2196 MAAALRSKSFKKIASTTTVSQSRYFVLNHMHIGRHRTKWVDE-------FSAKMMPYRLN 2038
            MAAALRSKS ++ A   T SQ RYF+LNHMH GR    ++         F+    PY   
Sbjct: 1    MAAALRSKSSRETA-LLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPYHFT 59

Query: 2037 LFKMAYFQGDFDDKGGKLCNLSSFKSYG------------------GEPPEFWQPPGGGI 1912
             FK    +G+  DKG +  +   F   G                  G+PPE W   G GI
Sbjct: 60   SFKPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GDGI 117

Query: 1911 TVRSAVPDGNIVRXXXXXXXXXXXXXXXXXXSKDGCWGGANMGDDIPTPKEICKGLDKFV 1732
             VR      N+VR                  SKD  WGG+N+G + PTPKEIC+GLDKFV
Sbjct: 118  VVRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKFV 177

Query: 1731 IGQERAKKVLSVAVYNHYKRIYHESQQKSAEDSTSSDANDSVELEKSNVLVMGPTGSGKT 1552
            IGQERAKKVLSVAVYNHYKRIYH+S QK  + + ++D NDSVELEKSN+L+MGPTGSGKT
Sbjct: 178  IGQERAKKVLSVAVYNHYKRIYHQSLQKCDDKAEATD-NDSVELEKSNILLMGPTGSGKT 236

Query: 1551 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVAEYNVEAAQQGIVYIDEV 1372
            LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVA+YNV AAQQGIVYIDEV
Sbjct: 237  LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEV 296

Query: 1371 DKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFI 1192
            DKITKKAESLN+SRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFI
Sbjct: 297  DKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFI 356

Query: 1191 CGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGLTNAAITSSLLETVESSDLIAYGLI 1012
            CGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGG T+AA+ SSLLETVESSDLI+YGLI
Sbjct: 357  CGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDLISYGLI 416

Query: 1011 PEFIGRFPVLVSLSALSEDQLVQVLTEPKNALGKQYKKMFQMNGVKLHFTEAALRLIAKK 832
            PEF+GRFP+LVSLSAL+E+QLV+VLTEPKNALGKQYKKMFQMNGVKLHFT+ ALRLI++K
Sbjct: 417  PEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALRLISRK 476

Query: 831  TMSRSTGARGLRSLLENILMEAMYEIPDLRSGNERIDAVVVDEEAVGSIEGSVSGAKILY 652
             MS++TGARGLRS+LENILM AMYEIPD+R+GN+ IDAVVVD+EAVGS +G   GAKILY
Sbjct: 477  AMSKNTGARGLRSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGS-DGHGFGAKILY 535

Query: 651  GDDALELYLSQHKLKDAEVTQDG-TERVPEVEPELPSIVVSM 529
            G  AL+ YLSQHKLK+ E   +G ++   E E E+PSIV SM
Sbjct: 536  GKGALDCYLSQHKLKETETPMEGSSDGEAEAEAEIPSIVASM 577


>emb|CBI23009.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  746 bits (1925), Expect = 0.0
 Identities = 406/587 (69%), Positives = 453/587 (77%), Gaps = 31/587 (5%)
 Frame = -2

Query: 2196 MAAALRSKSFKKIASTTTVSQSRYFVLNHMHIGRHRTKWVDE-------FSAKMMPYRLN 2038
            MAAALRSKS ++ A   T SQ RYF+LNHMH GR    ++         F+    PY   
Sbjct: 1    MAAALRSKSSRETA-LLTFSQFRYFILNHMHAGRLPNSYISHKPNCDHCFTHSHTPYHFT 59

Query: 2037 LFKMAYFQGDFDDKGGKLCNLSSFKSYG------------------GEPPEFWQPPGGGI 1912
             FK    +G+  DKG +  +   F   G                  G+PPE W   G GI
Sbjct: 60   SFKPVSLRGELVDKGLEFFDNQRFSKVGFSTNESKKLSRDTILNSFGDPPEVWS--GDGI 117

Query: 1911 TVRSAVPDGNIVRXXXXXXXXXXXXXXXXXXSKDGCWGGANMGDDIPTPKEICKGLDKFV 1732
             VR      N+VR                  SKD  WGG+N+G + PTPKEIC+GLDKFV
Sbjct: 118  VVRQGGSGSNLVRGGGGAGANGGAGSGFGSNSKDESWGGSNLGHNFPTPKEICRGLDKFV 177

Query: 1731 IGQERAKKVLSVAVYNHYKRIYHESQQKSAEDSTSSDA-----NDSVELEKSNVLVMGPT 1567
            IGQERAKKVLSVAVYNHYKRIYH+S QK   + TS D      NDSVELEKSN+L+MGPT
Sbjct: 178  IGQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSDDKAEATDNDSVELEKSNILLMGPT 237

Query: 1566 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVAEYNVEAAQQGIV 1387
            GSGKTLLAKTLARFVNVPFVIADATTLTQA YVGEDVESILYKLLMVA+YNV AAQQGIV
Sbjct: 238  GSGKTLLAKTLARFVNVPFVIADATTLTQARYVGEDVESILYKLLMVADYNVAAAQQGIV 297

Query: 1386 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTK 1207
            YIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTK
Sbjct: 298  YIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTK 357

Query: 1206 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGLTNAAITSSLLETVESSDLI 1027
            DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGG T+AA+ SSLLETVESSDLI
Sbjct: 358  DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGPTDAAVASSLLETVESSDLI 417

Query: 1026 AYGLIPEFIGRFPVLVSLSALSEDQLVQVLTEPKNALGKQYKKMFQMNGVKLHFTEAALR 847
            +YGLIPEF+GRFP+LVSLSAL+E+QLV+VLTEPKNALGKQYKKMFQMNGVKLHFT+ ALR
Sbjct: 418  SYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALR 477

Query: 846  LIAKKTMSRSTGARGLRSLLENILMEAMYEIPDLRSGNERIDAVVVDEEAVGSIEGSVSG 667
            LI++K MS++TGARGLRS+LENILM AMYEIPD+R+GN+ IDAVVVD+EAVGS +G   G
Sbjct: 478  LISRKAMSKNTGARGLRSILENILMNAMYEIPDVRTGNDIIDAVVVDDEAVGS-DGHGFG 536

Query: 666  AKILYGDDALELYLSQHKLKDAEVTQDG-TERVPEVEPELPSIVVSM 529
            AKILYG  AL+ YLSQHKLK+ E   +G ++   E E E+PSIV SM
Sbjct: 537  AKILYGKGALDCYLSQHKLKETETPMEGSSDGEAEAEAEIPSIVASM 583


>ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
            [Ricinus communis] gi|223544165|gb|EEF45689.1|
            ATP-dependent clp protease ATP-binding subunit clpx,
            putative [Ricinus communis]
          Length = 565

 Score =  744 bits (1920), Expect = 0.0
 Identities = 407/584 (69%), Positives = 459/584 (78%), Gaps = 28/584 (4%)
 Frame = -2

Query: 2196 MAAALRSKSFKKIASTTTVSQSRYFVLNHMHIG-----------RHRTKWVDEFSAKMMP 2050
            MAA  R+K  K+    T   Q RYF+ N+MH G            HR KW D FS    P
Sbjct: 1    MAAVFRAKPSKE----TAFYQFRYFIFNYMHAGGAIMSTSTSYCTHRNKWDDHFSNT--P 54

Query: 2049 YRLNLFKMAYFQGDFDDKGG-----------KLCNLSSFKSYGGEPPEFWQPPGGGI-TV 1906
            Y    FK    +G+F +KG            KL N S   S  G+PPE WQPPG GI TV
Sbjct: 55   YHFTSFKPVSLRGEFIEKGNQLLDNKRNWSEKLKNSSGGGSNYGDPPEVWQPPGDGIATV 114

Query: 1905 RSAVPDGNIVRXXXXXXXXXXXXXXXXXXSKDGCWGGANMGDDIPTPKEICKGLDKFVIG 1726
            R +   G   R                   KDGCWGG+++G++ PTPKEIC+GLDKFVIG
Sbjct: 115  RVSEVRGGEGRGGPGSNS------------KDGCWGGSDLGNNFPTPKEICRGLDKFVIG 162

Query: 1725 QERAKKVLSVAVYNHYKRIYHESQQK-SAEDSTSSDAN----DSVELEKSNVLVMGPTGS 1561
            Q+RAKKVLSVAVYNHYKRIYH+S QK SA DS ++ A     D VELEKSN+L+MGPTGS
Sbjct: 163  QDRAKKVLSVAVYNHYKRIYHDSIQKWSAGDSGNNKAEAMDEDGVELEKSNILLMGPTGS 222

Query: 1560 GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVAEYNVEAAQQGIVYI 1381
            GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLM A+YNV AAQQGIVYI
Sbjct: 223  GKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMAADYNVAAAQQGIVYI 282

Query: 1380 DEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDI 1201
            DEVDKITKKAES+NISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDI
Sbjct: 283  DEVDKITKKAESVNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDI 342

Query: 1200 LFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGLTNAAITSSLLETVESSDLIAY 1021
            LFICGGAFIDLEKTISERRQDSSIGFGAPVRANMR G +T+AA+TSSLLETVES DLI+Y
Sbjct: 343  LFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRMGSVTSAAVTSSLLETVESGDLISY 402

Query: 1020 GLIPEFIGRFPVLVSLSALSEDQLVQVLTEPKNALGKQYKKMFQMNGVKLHFTEAALRLI 841
            GLIPEF+GRFPVLVSLSAL+E+QLVQVLTEPKNALGKQYKKMFQMNGV+LHFTE ALRLI
Sbjct: 403  GLIPEFVGRFPVLVSLSALTENQLVQVLTEPKNALGKQYKKMFQMNGVRLHFTENALRLI 462

Query: 840  AKKTMSRSTGARGLRSLLENILMEAMYEIPDLRSGNERIDAVVVDEEAVGSIEGSVSGAK 661
            AKK ++++TGARGLR++LENILM+AMYEIPD+++G + IDAVVVDEEAVG+ EG  +G +
Sbjct: 463  AKKAITKNTGARGLRAILENILMDAMYEIPDVKTGEDIIDAVVVDEEAVGT-EGCGTGGR 521

Query: 660  ILYGDDALELYLSQHKLKDAEVTQDGTERVPEVEPELPSIVVSM 529
            ILYG  AL+ YL+++KLKD+E T DG++  PEVE EL SIV SM
Sbjct: 522  ILYGKGALDRYLAENKLKDSERTVDGSDGDPEVETELSSIVASM 565


>ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
            lyrata] gi|297310072|gb|EFH40496.1| hypothetical protein
            ARALYDRAFT_918413 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  709 bits (1829), Expect = 0.0
 Identities = 385/578 (66%), Positives = 449/578 (77%), Gaps = 22/578 (3%)
 Frame = -2

Query: 2196 MAAALRSKSFKKIASTTTVSQSRYFVLNHMHIGRHRTKWVDEFSAKMMPYRLNLFKMAYF 2017
            MAAALRS + ++ AS T +SQ RYF  N +H  R  T       +K  P +++    ++ 
Sbjct: 1    MAAALRSNTSRETASLT-LSQFRYFFFNRIHTARTATSPQCNHRSKS-PNKISSLGTSFL 58

Query: 2016 QGDFDDKGGKLCNLSS---------------FKSYGGEPPEFWQPPGGGITVRSAVPDGN 1882
                D++GG+  N ++                 S  G+PP+ WQPPG G++VR      N
Sbjct: 59   ----DNRGGERRNSTNCYASQKLNGVGSSVVMLSSQGDPPDLWQPPGDGVSVRVNGSSVN 114

Query: 1881 IVRXXXXXXXXXXXXXXXXXXS-KDGCWGGANMGDDIPTPKEICKGLDKFVIGQERAKKV 1705
            + R                  + K+ CWGG+N+G D PTPKEICKGL+KFVIGQERAKKV
Sbjct: 115  LGRGGGGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGLNKFVIGQERAKKV 174

Query: 1704 LSVAVYNHYKRIYHESQQKSAEDSTSSDA-----NDSVELEKSNVLVMGPTGSGKTLLAK 1540
            LSVAVYNHYKRIYHES QK +   T S A     +D VELEKSN+L+MGPTGSGKTLLAK
Sbjct: 175  LSVAVYNHYKRIYHESSQKRSAGETDSTAVKPADDDMVELEKSNILLMGPTGSGKTLLAK 234

Query: 1539 TLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVAEYNVEAAQQGIVYIDEVDKIT 1360
            TLARFVNVPFVIADATTLTQAGYVGEDVESILYKLL VA+YNV AAQQGIVYIDEVDKIT
Sbjct: 235  TLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKIT 294

Query: 1359 KKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGA 1180
            KKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGDNIQIDTKDILFICGGA
Sbjct: 295  KKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGA 354

Query: 1179 FIDLEKTISERRQDSSIGFGAPVRANMRTGGLTNAAITSSLLETVESSDLIAYGLIPEFI 1000
            F+D+EKTISERR DSSIGFGAPVRANMR GG+TNAA+ S+L+ETVESSDLIAYGLIPEF+
Sbjct: 355  FVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVESSDLIAYGLIPEFV 414

Query: 999  GRFPVLVSLSALSEDQLVQVLTEPKNALGKQYKKMFQMNGVKLHFTEAALRLIAKKTMSR 820
            GRFPVLVSLSAL+E+QL+QVLTEPKNALGKQYKKM+QMN VKLHFTE+ALRLIA+K +++
Sbjct: 415  GRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESALRLIARKAITK 474

Query: 819  STGARGLRSLLENILMEAMYEIPDLRSGNERIDAVVVDEEAVGSIEGSVSGAKILYGDDA 640
            +TGARGLRSLLE+ILM++MYEIPD  +G++ I+AVVVDEEAV       SGAKIL G  A
Sbjct: 475  NTGARGLRSLLESILMDSMYEIPDESTGSDMIEAVVVDEEAVEGEGRRGSGAKILRGKGA 534

Query: 639  LELYLSQHKLKDA-EVTQDGTERVPEVEPELPSIVVSM 529
            L  YLS+ K KD+ + T+DG++   EVE E+PS+V SM
Sbjct: 535  LGRYLSETKSKDSPQTTKDGSDGETEVEAEIPSVVASM 572