BLASTX nr result

ID: Cimicifuga21_contig00005486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005486
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18062.3| unnamed protein product [Vitis vinifera]              199   8e-49
ref|XP_002268581.1| PREDICTED: proactivator polypeptide-like 1 i...   198   2e-48
ref|XP_002308246.1| predicted protein [Populus trichocarpa] gi|2...   188   1e-45
ref|XP_002323058.1| predicted protein [Populus trichocarpa] gi|2...   187   3e-45
ref|XP_002533718.1| conserved hypothetical protein [Ricinus comm...   185   1e-44

>emb|CBI18062.3| unnamed protein product [Vitis vinifera]
          Length = 716

 Score =  199 bits (506), Expect = 8e-49
 Identities = 99/232 (42%), Positives = 142/232 (61%), Gaps = 14/232 (6%)
 Frame = -1

Query: 922  RSGISMDVRVGLLFLIVLGISWLNNVDARNLVTSDVLAKQVNYKQ----------AKNET 773
            R GI M VRVGLLFL+VLGISW    DAR L TSD+ +K + +             + E 
Sbjct: 472  RKGI-MGVRVGLLFLVVLGISWA--CDARQLQTSDLSSKSIGFSDFSVVLMNSLPKEGEA 528

Query: 772  EASQADAKDDRFCTLCEQYASQFVDYFGDNKTQREIIGILHLACSHLHSLKHECTTLVDY 593
             A + D  ++  CT+CE+  ++ +D   +N+TQ+ II +LH  CS + S K +C TLVDY
Sbjct: 529  LALEPDDGNENVCTMCERLITEALDLLAENRTQKLIIEMLHATCSEVQSFKQQCITLVDY 588

Query: 592  YVPFLFLEIARVEPVELCSTLNLCDLAFTS----EDTCTLCHEAVAEIVAKLDDPDIQFE 425
            Y   +F E+A + P   C   NLC   FT+    +D+C  C  AV E++ KL DPD Q E
Sbjct: 589  YAALIFSELALITPGNFCEKANLCGPTFTAGQLYQDSCVFCRHAVDEVLIKLRDPDTQLE 648

Query: 424  VIQILLKVCAKSDQYAKKCKKLVFELAPLIMNNVEKYLVKNDLCTTLHVCKI 269
            ++++LLK C   +   +KCK++VFE  P+I+NN E++L KND+CTT+H C +
Sbjct: 649  ILELLLKGCDAVEGLVRKCKRMVFEYGPIILNNTERFLEKNDVCTTVHACGV 700


>ref|XP_002268581.1| PREDICTED: proactivator polypeptide-like 1 isoform 1 [Vitis
           vinifera]
          Length = 241

 Score =  198 bits (503), Expect = 2e-48
 Identities = 96/227 (42%), Positives = 139/227 (61%), Gaps = 14/227 (6%)
 Frame = -1

Query: 907 MDVRVGLLFLIVLGISWLNNVDARNLVTSDVLAKQVNYKQ----------AKNETEASQA 758
           M VRVGLLFL+VLGISW    DAR L TSD+ +K + +             + E  A + 
Sbjct: 1   MGVRVGLLFLVVLGISWA--CDARQLQTSDLSSKSIGFSDFSVVLMNSLPKEGEALALEP 58

Query: 757 DAKDDRFCTLCEQYASQFVDYFGDNKTQREIIGILHLACSHLHSLKHECTTLVDYYVPFL 578
           D  ++  CT+CE+  ++ +D   +N+TQ+ II +LH  CS + S K +C TLVDYY   +
Sbjct: 59  DDGNENVCTMCERLITEALDLLAENRTQKLIIEMLHATCSEVQSFKQQCITLVDYYAALI 118

Query: 577 FLEIARVEPVELCSTLNLCDLAFTS----EDTCTLCHEAVAEIVAKLDDPDIQFEVIQIL 410
           F E+A + P   C   NLC   FT+    +D+C  C  AV E++ KL DPD Q E++++L
Sbjct: 119 FSELALITPGNFCEKANLCGPTFTAGQLYQDSCVFCRHAVDEVLIKLRDPDTQLEILELL 178

Query: 409 LKVCAKSDQYAKKCKKLVFELAPLIMNNVEKYLVKNDLCTTLHVCKI 269
           LK C   +   +KCK++VFE  P+I+NN E++L KND+CTT+H C +
Sbjct: 179 LKGCDAVEGLVRKCKRMVFEYGPIILNNTERFLEKNDVCTTVHACGV 225


>ref|XP_002308246.1| predicted protein [Populus trichocarpa] gi|222854222|gb|EEE91769.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  188 bits (478), Expect = 1e-45
 Identities = 93/228 (40%), Positives = 136/228 (59%), Gaps = 15/228 (6%)
 Frame = -1

Query: 907 MDVRVGLLFLIVLGISWLNNVDARNLV----------TSDVLAKQVNYKQAKNETEASQA 758
           MD+R+GLLFL+ L  +   +  AR +           T D+ A ++  ++ + + + S  
Sbjct: 1   MDMRIGLLFLLTLSAA--GSTAARQMAATEIFRTTTGTYDISAIKMKNQEQETDIQTSNN 58

Query: 757 DAKDDRFCTLCEQYASQFVDYFGDNKTQREIIGILHLACSHLHSLKHECTTLVDYYVPFL 578
             + D  CTLCE++A+Q +DY  +NKTQ EI+ ILH  CS L + K EC TLVDYY    
Sbjct: 59  VTRKDEVCTLCEEFAAQALDYMAENKTQTEILEILHKTCSRLTTFKQECITLVDYYSSIF 118

Query: 577 FLEIARVEPVELCSTLNLCD-----LAFTSEDTCTLCHEAVAEIVAKLDDPDIQFEVIQI 413
           F  ++ V+  + C   NLC       A   ED+C++C  A++E++ KL DPD Q E+I +
Sbjct: 119 FSYVSSVQSDDFCRKYNLCHEMEIFSAKHQEDSCSICQHAISEVLVKLKDPDTQLEIIDL 178

Query: 412 LLKVCAKSDQYAKKCKKLVFELAPLIMNNVEKYLVKNDLCTTLHVCKI 269
           LLK C   + YAKKCK++VFE  PLI+ N E++L   D+CT LH CK+
Sbjct: 179 LLKACNSMENYAKKCKRMVFEYGPLILINAEQFLETKDVCTLLHACKV 226


>ref|XP_002323058.1| predicted protein [Populus trichocarpa] gi|222867688|gb|EEF04819.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  187 bits (475), Expect = 3e-45
 Identities = 91/229 (39%), Positives = 139/229 (60%), Gaps = 15/229 (6%)
 Frame = -1

Query: 907 MDVRVGLLFLIVLGISWLNNVDARNLVTSDVLAKQ----------VNYKQAKNETEASQA 758
           MD+R+GLLFL+ LG +   ++ AR +  +++ +            +  ++ +NE + +  
Sbjct: 1   MDLRIGLLFLLALGAA--GSIAARQMAATEIFSTTAETYEISVEIMENQEQENEIQTTNN 58

Query: 757 DAKDDRFCTLCEQYASQFVDYFGDNKTQREIIGILHLACSHLHSLKHECTTLVDYYVPFL 578
             + D  CTLCE++ASQ +DY  +NKTQ EI+  LH +CS L + + EC TLVDYY    
Sbjct: 59  VTRKDEVCTLCEEFASQALDYLAENKTQTEILEKLHRSCSRLTTFEQECITLVDYYSSIF 118

Query: 577 FLEIARVEPVELCSTLNLCDLAFT-----SEDTCTLCHEAVAEIVAKLDDPDIQFEVIQI 413
           F   + V+  + C   NLC    T     ++D+C++C  AV+E++ KL DPD Q E+I++
Sbjct: 119 FSYASSVQSEDFCRKFNLCQEMKTFSAKRNDDSCSICQRAVSEVLVKLKDPDTQLEIIEL 178

Query: 412 LLKVCAKSDQYAKKCKKLVFELAPLIMNNVEKYLVKNDLCTTLHVCKIS 266
           LLK C   ++YA KCK++VFE  P+I+ N E++L   DLCT LH CK S
Sbjct: 179 LLKACNSMEKYAHKCKRMVFEYGPVILANAEQFLETTDLCTVLHACKES 227


>ref|XP_002533718.1| conserved hypothetical protein [Ricinus communis]
           gi|223526373|gb|EEF28663.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score =  185 bits (470), Expect = 1e-44
 Identities = 84/173 (48%), Positives = 116/173 (67%), Gaps = 5/173 (2%)
 Frame = -1

Query: 778 ETEASQADAKDDRFCTLCEQYASQFVDYFGDNKTQREIIGILHLACSHLHSLKHECTTLV 599
           E + S     +++ C LCE++ASQ +DY  +NKTQ EI+G LH ACS + + K +C TLV
Sbjct: 9   ENQPSNEVVGNEQVCVLCEEFASQALDYLTENKTQTEILGALHQACSRVPTFKQQCMTLV 68

Query: 598 DYYVPFLFLEIARVEPVELCSTLNLC-DLAFTS----EDTCTLCHEAVAEIVAKLDDPDI 434
           DYY P  FLE++ V+P E C  +NLC ++ F S    ED C +CH AVAE++ KL +PD 
Sbjct: 69  DYYAPLFFLEVSSVQPEEFCQKVNLCQEIVFISSKFQEDRCGICHRAVAEVLIKLKNPDT 128

Query: 433 QFEVIQILLKVCAKSDQYAKKCKKLVFELAPLIMNNVEKYLVKNDLCTTLHVC 275
           Q E+I++LLK C   + YA KCK+LVFE  P+I+ N E++L   D+CT LH C
Sbjct: 129 QLEIIEVLLKGCDSMENYAAKCKRLVFEYGPIILTNAEQFLESRDICTMLHAC 181


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