BLASTX nr result

ID: Cimicifuga21_contig00005474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005474
         (1706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22803.3| unnamed protein product [Vitis vinifera]              712   0.0  
ref|XP_002264350.1| PREDICTED: omega-3 fatty acid desaturase, ch...   712   0.0  
emb|CAN80104.1| hypothetical protein VITISV_040344 [Vitis vinifera]   711   0.0  
emb|CBI25467.3| unnamed protein product [Vitis vinifera]              704   0.0  
ref|XP_002273774.1| PREDICTED: omega-3 fatty acid desaturase, ch...   702   0.0  

>emb|CBI22803.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  712 bits (1838), Expect = 0.0
 Identities = 335/451 (74%), Positives = 375/451 (83%), Gaps = 5/451 (1%)
 Frame = -1

Query: 1529 MASWVLSECGVRPLPRQFHRPRARITSNNNPNKIKLPFCKIGD-RTDLN---SIWC-RNR 1365
            MASWVLSECG+RPLP+ + RPR    SN+  N  ++ F      +TDL     I C + R
Sbjct: 1    MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDLKFREPIGCSKER 60

Query: 1364 DWGLKVSAPLKVQSXXXXXXXXXXGINGVQEESQFDPSAPPPFGLADIRAAIPKHCWVRD 1185
            +W LKVSAPL+V+            +NGV+E+ +FDP APPPF LADIRAAIPKHCWV+D
Sbjct: 61   NWALKVSAPLRVE------------VNGVEEQPEFDPGAPPPFKLADIRAAIPKHCWVKD 108

Query: 1184 PWRSMSYVLRDXXXXXXXXXXXXXXXXXXXWPLYWAAQGTMFWALFVLGHDCGHGSFSGN 1005
            PWRSMSYV+RD                   WPLYWAAQGTMFWALFVLGHDCGHGSFS N
Sbjct: 109  PWRSMSYVVRDVVVVCGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNN 168

Query: 1004 LNLNSVVGHILHSSILVPYNGWRISHRTHHQNHGHVENDESWHPLPERIFRQLDDISRKV 825
              LNSVVGH+LHSSILVPY+GWRISHRTHHQNHGHVENDESWHPLPERI++ LD ++R +
Sbjct: 169  PTLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERIYKNLDVVTRML 228

Query: 824  RFTVPFPMLAYPFYLWGRSPGKKGSHFHPSSDLFLPNEKKDVITSTVCWTAMAALIVGLS 645
            RFTVPFPMLAYPFYLW RSPGK GSHF PSSDLF+P+E+K+VITST+CWTAMAAL+VGLS
Sbjct: 229  RFTVPFPMLAYPFYLWSRSPGKTGSHFDPSSDLFVPSERKNVITSTICWTAMAALLVGLS 288

Query: 644  FVTGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDY 465
            FV GPIQMLKLYGVPYWIFVMWLDFVTYLHHHGH+DKLPWYRGKEWSYLRGGLTTLDRDY
Sbjct: 289  FVMGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHDDKLPWYRGKEWSYLRGGLTTLDRDY 348

Query: 464  GVINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKKSGPLPVHLIGSLV 285
            G INNIHHDIGTHVIHHLFPQIPHYHL+EATEAAKPVLGKYYREPK SGPLP HLIGSLV
Sbjct: 349  GWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKGSGPLPFHLIGSLV 408

Query: 284  KSMKEDHYVSDTGDILYYQTDPQLSGSRQSE 192
            +S+K+DHYV+DT +I+YYQ+DPQLSGS  S+
Sbjct: 409  RSLKKDHYVNDTDEIVYYQSDPQLSGSSNSK 439


>ref|XP_002264350.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic [Vitis
            vinifera]
          Length = 452

 Score =  712 bits (1838), Expect = 0.0
 Identities = 335/452 (74%), Positives = 375/452 (82%), Gaps = 6/452 (1%)
 Frame = -1

Query: 1529 MASWVLSECGVRPLPRQFHRPRARITSNNNPNKIKLPFCKIGD-RTDLN---SIWC-RNR 1365
            MASWVLSECG+RPLP+ + RPR    SN+  N  ++ F      +TDL     I C + R
Sbjct: 1    MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDLKFREPIGCSKER 60

Query: 1364 DWGLKVSAPLKVQ-SXXXXXXXXXXGINGVQEESQFDPSAPPPFGLADIRAAIPKHCWVR 1188
            +W LKVSAPL+V+             +NGV+E+ +FDP APPPF LADIRAAIPKHCWV+
Sbjct: 61   NWALKVSAPLRVEYGEEEERGEIINRVNGVEEQPEFDPGAPPPFKLADIRAAIPKHCWVK 120

Query: 1187 DPWRSMSYVLRDXXXXXXXXXXXXXXXXXXXWPLYWAAQGTMFWALFVLGHDCGHGSFSG 1008
            DPWRSMSYV+RD                   WPLYWAAQGTMFWALFVLGHDCGHGSFS 
Sbjct: 121  DPWRSMSYVVRDVVVVCGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSN 180

Query: 1007 NLNLNSVVGHILHSSILVPYNGWRISHRTHHQNHGHVENDESWHPLPERIFRQLDDISRK 828
            N  LNSVVGH+LHSSILVPY+GWRISHRTHHQNHGHVENDESWHPLPERI++ LD ++R 
Sbjct: 181  NPTLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERIYKNLDVVTRM 240

Query: 827  VRFTVPFPMLAYPFYLWGRSPGKKGSHFHPSSDLFLPNEKKDVITSTVCWTAMAALIVGL 648
            +RFTVPFPMLAYPFYLW RSPGK GSHF PSSDLF+P+E+K+VITST+CWTAMAAL+VGL
Sbjct: 241  LRFTVPFPMLAYPFYLWSRSPGKTGSHFDPSSDLFVPSERKNVITSTICWTAMAALLVGL 300

Query: 647  SFVTGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRD 468
            SFV GPIQMLKLYGVPYWIFVMWLDFVTYLHHHGH+DKLPWYRGKEWSYLRGGLTTLDRD
Sbjct: 301  SFVMGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHDDKLPWYRGKEWSYLRGGLTTLDRD 360

Query: 467  YGVINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKKSGPLPVHLIGSL 288
            YG INNIHHDIGTHVIHHLFPQIPHYHL+EATEAAKPVLGKYYREPK SGPLP HLIGSL
Sbjct: 361  YGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKGSGPLPFHLIGSL 420

Query: 287  VKSMKEDHYVSDTGDILYYQTDPQLSGSRQSE 192
            V+S+K+DHYV+DT +I+YYQ+DPQLSGS  S+
Sbjct: 421  VRSLKKDHYVNDTDEIVYYQSDPQLSGSSNSK 452


>emb|CAN80104.1| hypothetical protein VITISV_040344 [Vitis vinifera]
          Length = 452

 Score =  711 bits (1835), Expect = 0.0
 Identities = 335/452 (74%), Positives = 374/452 (82%), Gaps = 6/452 (1%)
 Frame = -1

Query: 1529 MASWVLSECGVRPLPRQFHRPRARITSNNNPNKIKLPFCKIGD-RTDLN---SIWC-RNR 1365
            MASWVLSECG+RPLP+ + RPR    SN+  N  ++ F      +TDL     I C + R
Sbjct: 1    MASWVLSECGIRPLPQIYTRPRTGHISNSKNNHSRIRFFHSNQSKTDLKFREPIGCSKER 60

Query: 1364 DWGLKVSAPLKVQ-SXXXXXXXXXXGINGVQEESQFDPSAPPPFGLADIRAAIPKHCWVR 1188
            +W LKVSAPL+V              +NGV+E+ +FDP APPPF LADIRAAIPKHCWV+
Sbjct: 61   NWALKVSAPLRVXYGEEEERGEIINRVNGVEEQPEFDPGAPPPFKLADIRAAIPKHCWVK 120

Query: 1187 DPWRSMSYVLRDXXXXXXXXXXXXXXXXXXXWPLYWAAQGTMFWALFVLGHDCGHGSFSG 1008
            DPWRSMSYV+RD                   WPLYWAAQGTMFWALFVLGHDCGHGSFS 
Sbjct: 121  DPWRSMSYVVRDVVVVCGLAAAAAYLNNWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSN 180

Query: 1007 NLNLNSVVGHILHSSILVPYNGWRISHRTHHQNHGHVENDESWHPLPERIFRQLDDISRK 828
            N  LNSVVGH+LHSSILVPY+GWRISHRTHHQNHGHVENDESWHPLPERI++ LD ++R 
Sbjct: 181  NPTLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLPERIYKNLDVVTRM 240

Query: 827  VRFTVPFPMLAYPFYLWGRSPGKKGSHFHPSSDLFLPNEKKDVITSTVCWTAMAALIVGL 648
            +RFTVPFPMLAYPFYLW RSPGK GSHF PSSDLF+P+E+K+VITST+CWTAMAAL+VGL
Sbjct: 241  LRFTVPFPMLAYPFYLWSRSPGKTGSHFDPSSDLFVPSERKNVITSTICWTAMAALLVGL 300

Query: 647  SFVTGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRD 468
            SFV GPIQMLKLYGVPYWIFVMWLDFVTYLHHHGH+DKLPWYRGKEWSYLRGGLTTLDRD
Sbjct: 301  SFVMGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHDDKLPWYRGKEWSYLRGGLTTLDRD 360

Query: 467  YGVINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKKSGPLPVHLIGSL 288
            YG INNIHHDIGTHVIHHLFPQIPHYHL+EATEAAKPVLGKYYREPK SGPLP HLIGSL
Sbjct: 361  YGWINNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKGSGPLPFHLIGSL 420

Query: 287  VKSMKEDHYVSDTGDILYYQTDPQLSGSRQSE 192
            V+S+K+DHYV+DT +I+YYQ+DPQLSGS  S+
Sbjct: 421  VRSLKKDHYVNDTDEIVYYQSDPQLSGSSNSK 452


>emb|CBI25467.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  704 bits (1817), Expect = 0.0
 Identities = 334/454 (73%), Positives = 374/454 (82%), Gaps = 8/454 (1%)
 Frame = -1

Query: 1529 MASWVLSECGVRPLPRQFHRPRARITSNNNPNKIK---LPFCKIGDRTDLNSIWC----R 1371
            MASWV+SECG+RPLPR + RPR  I+S    +++K   LP CK G      S+W     R
Sbjct: 1    MASWVVSECGLRPLPRIYPRPRTGISSTET-SQLKCRALPLCKNGKAP---SLWVSGGSR 56

Query: 1370 NRDWGLKVSAPLKVQSXXXXXXXXXXGINGVQE-ESQFDPSAPPPFGLADIRAAIPKHCW 1194
            +R+WGLKVSAPL V S           INGV + +  FDP APPPF LA+IRAAIPKHCW
Sbjct: 57   SREWGLKVSAPLMVGSVDEEFREGEA-INGVSDGDGGFDPGAPPPFRLAEIRAAIPKHCW 115

Query: 1193 VRDPWRSMSYVLRDXXXXXXXXXXXXXXXXXXXWPLYWAAQGTMFWALFVLGHDCGHGSF 1014
            ++DPWRSMSYV+RD                   WPLYW AQGTMFWALFVLGHDCGHGSF
Sbjct: 116  MKDPWRSMSYVVRDVAVVFGLAAAAAYFNHWAVWPLYWFAQGTMFWALFVLGHDCGHGSF 175

Query: 1013 SGNLNLNSVVGHILHSSILVPYNGWRISHRTHHQNHGHVENDESWHPLPERIFRQLDDIS 834
            S N  LNSVVGH+LHSSILVPY+GWRISHRTHHQNHGHVENDESWHPL E+I+R LD  +
Sbjct: 176  SSNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRSLDTAT 235

Query: 833  RKVRFTVPFPMLAYPFYLWGRSPGKKGSHFHPSSDLFLPNEKKDVITSTVCWTAMAALIV 654
            R +RFT+PFPMLAYP YLWGRSPGK GSHF P+SDLF+PNE+KDVITSTVCW+AMAAL+V
Sbjct: 236  RTLRFTLPFPMLAYPLYLWGRSPGKTGSHFDPNSDLFIPNERKDVITSTVCWSAMAALLV 295

Query: 653  GLSFVTGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLD 474
             LSFV GP+QMLKLYG+PYWIFVMWLD VTYLHHHGHE+KLPWYRGKEWSYLRGGLTTLD
Sbjct: 296  CLSFVMGPVQMLKLYGIPYWIFVMWLDLVTYLHHHGHEEKLPWYRGKEWSYLRGGLTTLD 355

Query: 473  RDYGVINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKKSGPLPVHLIG 294
            RDYGVINNIHHDIGTHVIHHLFPQIPHYHLVEAT+AAKPVLGKYYREPKKSGPLP HL+G
Sbjct: 356  RDYGVINNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPKKSGPLPFHLLG 415

Query: 293  SLVKSMKEDHYVSDTGDILYYQTDPQLSGSRQSE 192
            SL++SMK+DHYVSDTGD++YYQ DPQL GS++SE
Sbjct: 416  SLIRSMKQDHYVSDTGDVVYYQKDPQLPGSQKSE 449


>ref|XP_002273774.1| PREDICTED: omega-3 fatty acid desaturase, chloroplastic [Vitis
            vinifera]
          Length = 456

 Score =  702 bits (1813), Expect = 0.0
 Identities = 335/461 (72%), Positives = 374/461 (81%), Gaps = 15/461 (3%)
 Frame = -1

Query: 1529 MASWVLSECGVRPLPRQFHRPRARITSNNNPNKIK---LPFCKIGDRTDLNSIWC----R 1371
            MASWV+SECG+RPLPR + RPR  I+S    +++K   LP CK G      S+W     R
Sbjct: 1    MASWVVSECGLRPLPRIYPRPRTGISSTET-SQLKCRALPLCKNGKAP---SLWVSGGSR 56

Query: 1370 NRDWGLKVSAPLKVQSXXXXXXXXXXGINGVQE--------ESQFDPSAPPPFGLADIRA 1215
            +R+WGLKVSAPL V S           INGV E        +  FDP APPPF LA+IRA
Sbjct: 57   SREWGLKVSAPLMVGSVDEEFREGEA-INGVSELGLGEGDGDGGFDPGAPPPFRLAEIRA 115

Query: 1214 AIPKHCWVRDPWRSMSYVLRDXXXXXXXXXXXXXXXXXXXWPLYWAAQGTMFWALFVLGH 1035
            AIPKHCW++DPWRSMSYV+RD                   WPLYW AQGTMFWALFVLGH
Sbjct: 116  AIPKHCWMKDPWRSMSYVVRDVAVVFGLAAAAAYFNHWAVWPLYWFAQGTMFWALFVLGH 175

Query: 1034 DCGHGSFSGNLNLNSVVGHILHSSILVPYNGWRISHRTHHQNHGHVENDESWHPLPERIF 855
            DCGHGSFS N  LNSVVGH+LHSSILVPY+GWRISHRTHHQNHGHVENDESWHPL E+I+
Sbjct: 176  DCGHGSFSSNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIY 235

Query: 854  RQLDDISRKVRFTVPFPMLAYPFYLWGRSPGKKGSHFHPSSDLFLPNEKKDVITSTVCWT 675
            R LD  +R +RFT+PFPMLAYP YLWGRSPGK GSHF P+SDLF+PNE+KDVITSTVCW+
Sbjct: 236  RSLDTATRTLRFTLPFPMLAYPLYLWGRSPGKTGSHFDPNSDLFIPNERKDVITSTVCWS 295

Query: 674  AMAALIVGLSFVTGPIQMLKLYGVPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLR 495
            AMAAL+V LSFV GP+QMLKLYG+PYWIFVMWLD VTYLHHHGHE+KLPWYRGKEWSYLR
Sbjct: 296  AMAALLVCLSFVMGPVQMLKLYGIPYWIFVMWLDLVTYLHHHGHEEKLPWYRGKEWSYLR 355

Query: 494  GGLTTLDRDYGVINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKKSGP 315
            GGLTTLDRDYGVINNIHHDIGTHVIHHLFPQIPHYHLVEAT+AAKPVLGKYYREPKKSGP
Sbjct: 356  GGLTTLDRDYGVINNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPKKSGP 415

Query: 314  LPVHLIGSLVKSMKEDHYVSDTGDILYYQTDPQLSGSRQSE 192
            LP HL+GSL++SMK+DHYVSDTGD++YYQ DPQL GS++SE
Sbjct: 416  LPFHLLGSLIRSMKQDHYVSDTGDVVYYQKDPQLPGSQKSE 456


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