BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005448
         (2419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   746   0.0  
ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|2...   746   0.0  
ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|2...   746   0.0  
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   745   0.0  
gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]      744   0.0  

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  746 bits (1927), Expect = 0.0
 Identities = 380/575 (66%), Positives = 455/575 (79%), Gaps = 3/575 (0%)
 Frame = -3

Query: 2135 MNLSRKGISNNTSTLNTGTKATALNPNAAEFVPFSLRATPVSTNPAEVSAWVDASGTSGK 1956
            M+LS+KG   N   L++  K T LNPNAAEFVPF+LR++  ST+  + SA    SGT GK
Sbjct: 1    MSLSKKGNPINNIKLDSTAKVTTLNPNAAEFVPFALRSSSGSTSTGDASARFTPSGTLGK 60

Query: 1955 TVLDRXXXXXXXXXXXEAHQYWRHHLPDDITPDFKFLEENESQGPSSLSFENLSINDVGE 1776
              LDR           EAHQYWR  LPDDITPDFK + E+ESQ    LS   LS++D  E
Sbjct: 61   AKLDRSESSISNNSDEEAHQYWRCQLPDDITPDFKVMGEDESQALGGLSLAGLSLHDSTE 120

Query: 1775 IPSFPAPTGGGLILSKQHDLSSHGINQNSLIGKMRHTATPYVSDQSSAGFVNLPSNPWEK 1596
               F A  G G IL++Q +LS H +N NS   KMR++A+PY  D SSA F++LP+ PW+K
Sbjct: 121  TSRFSA--GSGYILNEQQELSPHHVNGNSFTDKMRYSASPYGEDPSSATFLHLPNKPWDK 178

Query: 1595 QFANGDQLLGNGREGLPYNGNSGTKFMNDVLSEHAVSDDSEINPVELLASNFPGFAAESL 1416
            Q  +GDQLL NGREG PYNGNS   F+ND+L+EHA+ D++++NP+E LA  FPGFAAESL
Sbjct: 179  QIVHGDQLLSNGREGTPYNGNSRHGFVNDMLNEHAMVDETDMNPLEFLALQFPGFAAESL 238

Query: 1415 AEVYYANGCDLNLTIDMLTQLELQVDGGFNQNLNSKTLSAPNLSALDFPALSESDGQNGL 1236
             EVY+AN CDLN+TI+MLTQLELQVDGGF+QN+NSKTLSAPNLS LDFP+L   DGQNGL
Sbjct: 239  TEVYFANECDLNMTIEMLTQLELQVDGGFSQNMNSKTLSAPNLSGLDFPSLPVPDGQNGL 298

Query: 1235 EKYAGDILQHSTSPYRSADKDNLFFFKTGTSVQPRGATNFASAVKKLASQDPGQFKYERY 1056
             KYAGD +Q   +PYRS+DKDNL  FK+ +S+  RGAT+FASAV+KLA+QD G +K++R 
Sbjct: 299  PKYAGDDIQQGVNPYRSSDKDNLLMFKSNSSIPSRGATDFASAVRKLATQDSGIWKFDRN 358

Query: 1055 GSANPSVGSSRNSQILASSYGGGQGRSAYGDRSQNYGSARGAPVWLETGEAVANMYSEHR 876
            G+A+ +VGSSR+S +LASSY  G GR  YGDR QN GSAR AP W+ETGEAVANMYSE R
Sbjct: 359  GTADVNVGSSRSSHVLASSYNSGHGRGTYGDRLQNRGSARVAPAWVETGEAVANMYSELR 418

Query: 875  EEARDHARLRNAYFDQARQAYLIGNKALAKELSIKGQLHSMHMKEAHGKAQESIYRQRN- 699
            EEARDHARLRNAYF+QA+QAYLIGNKALAKELS+KG+LHS+HMK AHGKAQE+IYRQRN 
Sbjct: 419  EEARDHARLRNAYFEQAQQAYLIGNKALAKELSLKGKLHSIHMKAAHGKAQEAIYRQRNP 478

Query: 698  --ADVPGYGRGQERMIDLHGLHVNEAIHRLRNELSALRNAARSADQRLQVYICVGTGHHT 525
               ++ G  RG ERMIDLHGLHV+EAIH L++EL+ LR+ ARSADQRLQVYICVGTGHHT
Sbjct: 479  VSPELQGNARG-ERMIDLHGLHVSEAIHVLKHELNVLRSTARSADQRLQVYICVGTGHHT 537

Query: 524  KGSRTPARLPVAVEQYLLQEEGLDYTEPQAGLLRV 420
            +GSRTPARLPVAV++YLL+EEGLDYTEPQAGLLRV
Sbjct: 538  RGSRTPARLPVAVQRYLLEEEGLDYTEPQAGLLRV 572


>ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|222865637|gb|EEF02768.1|
            predicted protein [Populus trichocarpa]
          Length = 583

 Score =  746 bits (1925), Expect = 0.0
 Identities = 380/583 (65%), Positives = 451/583 (77%), Gaps = 8/583 (1%)
 Frame = -3

Query: 2135 MNLSRKGISNNTSTLNTGTKATALNPNAAEFVPFSLRATPV----STNPAEVSAWVDASG 1968
            MNLS+KG   N + L+   KAT LNPNAAEFVPFSLR++      ++N  + +  +  SG
Sbjct: 1    MNLSKKGSLTNDTKLSLPNKATTLNPNAAEFVPFSLRSSSSPSGSTSNTTDAATKLATSG 60

Query: 1967 TSGKTVLDRXXXXXXXXXXXEAHQYWRHHLPDDITPDFKFLEENESQGPSSLSFENLSIN 1788
            T GK+VLDR           EAHQ+WRH LPDDITPDFK + E+ESQG   LS   LS++
Sbjct: 61   TVGKSVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMNEDESQGLGGLSLAGLSLH 120

Query: 1787 DVGEIPSFPAPTGGGLILSKQHDLSSHGINQNSLIGKMRHTATPYVSDQSSAGFVNLPSN 1608
            D  E+P F A +  G +L++Q + S H IN +S    MR+    Y  D +SA F+NLP+ 
Sbjct: 121  DSSEVPRFHASSRSGYVLTEQQEPSPHHINGSSFSENMRYAVASYGEDPTSASFLNLPTK 180

Query: 1607 PWEKQFANGDQLLGNGREGLPYNGNSGTKFMNDVLSEHAVSDDSEINPVELLASNFPGFA 1428
            PW+KQ AN DQLL NGRE  PYNGNS   F +++L EHA+ DD+EINP+E LAS FPGFA
Sbjct: 181  PWDKQIANSDQLLSNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLEFLASQFPGFA 240

Query: 1427 AESLAEVYYANGCDLNLTIDMLTQLELQVDGGFNQNLNSKTLSAP-NLSALDFPALSESD 1251
            AESLAEVY+AN CDLNLTI+MLTQLELQVDGGFNQ  NSKT+SAP NLSALDFPAL+  D
Sbjct: 241  AESLAEVYFANACDLNLTIEMLTQLELQVDGGFNQTTNSKTVSAPTNLSALDFPALTVPD 300

Query: 1250 GQNGLEKYAGDILQHSTSPYRSADKDNLFFFKTGTSVQPRGATNFASAVKKLASQDPGQF 1071
             QNG  KYAGD LQ +  PYRS++KDN+  FK+G S   RGA +FASAV+KLASQD   +
Sbjct: 301  NQNGPSKYAGDDLQQAGIPYRSSNKDNMLVFKSGASFSSRGAVDFASAVRKLASQDSSMW 360

Query: 1070 KYERYGSANPSVGSSRNSQILASSYGGGQGRSAYGDRSQNYGSARGAPVWLETGEAVANM 891
             ++R GSA+ +VGSSR+S +LAS+Y GG GR  Y DRSQ+ GS + APVWLETGEAVA+M
Sbjct: 361  NHDRNGSADSTVGSSRSSHVLASAYSGGHGRGIYADRSQSRGSGQAAPVWLETGEAVASM 420

Query: 890  YSEHREEARDHARLRNAYFDQARQAYLIGNKALAKELSIKGQLHSMHMKEAHGKAQESIY 711
            YSE REEARDHAR+RNAY +QARQAYLIGNKALAKELS KGQLH+MHMKEAHGKAQESIY
Sbjct: 421  YSEMREEARDHARIRNAYLEQARQAYLIGNKALAKELSAKGQLHNMHMKEAHGKAQESIY 480

Query: 710  RQRN---ADVPGYGRGQERMIDLHGLHVNEAIHRLRNELSALRNAARSADQRLQVYICVG 540
            RQRN    ++ G GRG ERMIDLHGLHV EAIH L++ELS LR+ AR+ADQRLQVYICVG
Sbjct: 481  RQRNPASLEMQGTGRGHERMIDLHGLHVTEAIHVLKHELSILRSTARAADQRLQVYICVG 540

Query: 539  TGHHTKGSRTPARLPVAVEQYLLQEEGLDYTEPQAGLLRVVIY 411
            TGHHT+G+RTPARLPVAV++YLL+EEGLDYTEPQ GLLRVV+Y
Sbjct: 541  TGHHTRGARTPARLPVAVQRYLLEEEGLDYTEPQPGLLRVVMY 583


>ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|222855432|gb|EEE92979.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  746 bits (1925), Expect = 0.0
 Identities = 380/582 (65%), Positives = 451/582 (77%), Gaps = 7/582 (1%)
 Frame = -3

Query: 2135 MNLSRKGISNNTSTLNTGTKATALNPNAAEFVPFSLRATPV----STNPAEVSAWVDASG 1968
            M+LS+KG   N + LN  +KAT LNPNAAEFVPFSLR++      ++N A+ +     SG
Sbjct: 1    MSLSKKGSLTNDTKLNLPSKATTLNPNAAEFVPFSLRSSSSPSGSTSNSADAATKFTTSG 60

Query: 1967 TSGKTVLDRXXXXXXXXXXXEAHQYWRHHLPDDITPDFKFLEENESQGPSSLSFENLSIN 1788
            T GK VLDR           EAHQ+WRH LPDDITPDFK + ++ESQG   LS   LS++
Sbjct: 61   TVGKAVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMSDDESQGLGGLSLAGLSLH 120

Query: 1787 DVGEIPSFPAPTGGGLILSKQHDLSSHGINQNSLIGKMRHTATPYVSDQSSAGFVNLPSN 1608
            D  E+P F A +  G +L++Q + S   +N +S   KMR+ +  Y  D SSA F+NLP+ 
Sbjct: 121  D-SEVPRFHASSRSGYVLTEQQEPSPRHMNGSSFGEKMRYPSASYGEDPSSASFLNLPTK 179

Query: 1607 PWEKQFANGDQLLGNGREGLPYNGNSGTKFMNDVLSEHAVSDDSEINPVELLASNFPGFA 1428
            PW+KQ ANGD LLGNGRE  PYNGNS   F +++L EHA+ DD+EINP+  LAS FPGFA
Sbjct: 180  PWDKQIANGDHLLGNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLGFLASQFPGFA 239

Query: 1427 AESLAEVYYANGCDLNLTIDMLTQLELQVDGGFNQNLNSKTLSAPNLSALDFPALSESDG 1248
             ESLAEVY+A+GCDLNLT++MLTQLELQVDG FNQN NSKTLSAPNLSALDFPAL+  D 
Sbjct: 240  TESLAEVYFASGCDLNLTVEMLTQLELQVDGSFNQNTNSKTLSAPNLSALDFPALTVLDN 299

Query: 1247 QNGLEKYAGDILQHSTSPYRSADKDNLFFFKTGTSVQPRGATNFASAVKKLASQDPGQFK 1068
            QNG  KY GD LQ ++ PYRS++KDN+  FK G S   RGA +FASAV+KLASQD   +K
Sbjct: 300  QNGSSKYTGDDLQQASVPYRSSNKDNMLLFKPGGSFSSRGAVDFASAVRKLASQDSSMWK 359

Query: 1067 YERYGSANPSVGSSRNSQILASSYGGGQGRSAYGDRSQNYGSARGAPVWLETGEAVANMY 888
            ++R GSA+ +VGSSR+S +L S+YGGG GR  Y DR Q+ GS R APVWLETGEAVANMY
Sbjct: 360  HDRNGSADSTVGSSRSSHVLPSAYGGGHGRGIYADRLQSRGSGRQAPVWLETGEAVANMY 419

Query: 887  SEHREEARDHARLRNAYFDQARQAYLIGNKALAKELSIKGQLHSMHMKEAHGKAQESIYR 708
            SE REEARDHARLRNAYF+QARQAYLIGNKALAKELS+KGQLH+MHMKEAHGKAQESIY 
Sbjct: 420  SEMREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKEAHGKAQESIYH 479

Query: 707  QRN---ADVPGYGRGQERMIDLHGLHVNEAIHRLRNELSALRNAARSADQRLQVYICVGT 537
            QRN    ++ G GRG E+MIDLHGLHV EAIH L++ELS LR+ A++ADQRLQVYICVGT
Sbjct: 480  QRNPVSLEMQGTGRGHEQMIDLHGLHVTEAIHVLKHELSVLRSTAQAADQRLQVYICVGT 539

Query: 536  GHHTKGSRTPARLPVAVEQYLLQEEGLDYTEPQAGLLRVVIY 411
            GHHT+GSRTPARLPVAV++YLL+EEGLDYTEP  GLLRVVIY
Sbjct: 540  GHHTRGSRTPARLPVAVQRYLLEEEGLDYTEPHPGLLRVVIY 581


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  745 bits (1923), Expect = 0.0
 Identities = 383/580 (66%), Positives = 452/580 (77%), Gaps = 9/580 (1%)
 Frame = -3

Query: 2135 MNLSRKGISNNTSTLNTGTKATALNPNAAEFVPFSLRA----TPVSTNPAEVSAWVDASG 1968
            M+LS+KG   NT+ LN  +KATALNPNAAEFVPFSLR+    +  ++N A  +A    SG
Sbjct: 1    MSLSKKGSQTNTTKLNIPSKATALNPNAAEFVPFSLRSLSSPSGSTSNAAATTARFATSG 60

Query: 1967 TSGKTVLDRXXXXXXXXXXXEAHQYWRHHLPDDITPDFKFLEENESQGPSSLSFENLSIN 1788
              GK VLDR           EAHQ+WRH LPDDITPDFK + E+ESQ    LS   LS++
Sbjct: 61   PVGKAVLDRSESSISTTSDEEAHQFWRHQLPDDITPDFKVMGEDESQSLGGLSLAGLSLH 120

Query: 1787 DVGEIPSFPAPTGGGLILSKQHDLSSHGINQNSLIGKMRHTATPYVSDQSSA-GFVNLPS 1611
            D  E+P FPA  G G IL++Q + S   IN +S   KMR+    Y  D +SA G++NLP+
Sbjct: 121  DSSEVPKFPASVGSGYILTEQQEPSPRHINGSSFSEKMRYAIASYGEDPTSAAGYLNLPT 180

Query: 1610 NPWEKQFANGDQLLGNGREGLPYNGNSGTKFMNDVLSEHAVSDDSEINPVELLASNFPGF 1431
             PW+KQ  N D LLGNGRE  PYNGNS   FMND+L E A+ D+ ++NP++ LAS+FPGF
Sbjct: 181  KPWDKQIINNDHLLGNGREVHPYNGNSRRGFMNDMLGEQAIVDEPDMNPLDFLASHFPGF 240

Query: 1430 AAESLAEVYYANGCDLNLTIDMLTQLELQVDGGFNQNLNSKTLSAPNLSALDFPALSESD 1251
            AAESLAEVY+ANG DLNLTI+MLTQLELQVDGGFNQN+NSK LSAPNLSA+DFPAL   D
Sbjct: 241  AAESLAEVYFANGYDLNLTIEMLTQLELQVDGGFNQNMNSKALSAPNLSAMDFPALPVPD 300

Query: 1250 GQNGLEKYAGDILQHSTSPYRSADKDNLFFFKTGTSVQPR-GATNFASAVKKLASQDPGQ 1074
             QN   KY+GD +Q S +PYRS+DK+N+  FK+ +S   R GA +FASAV+KLASQD G 
Sbjct: 301  SQNSPSKYSGDDIQQSGNPYRSSDKENILLFKSSSSTPSRGGAIDFASAVRKLASQDSGI 360

Query: 1073 FKYERYGSANPSVGSSRNSQILASSYGGGQGRSAYGDRSQNYGSARGAPVWLETGEAVAN 894
            +KYER GSA+ +VGSSR+S +LASSY  G GR  Y +R+QN GSAR APVWLETGEAVAN
Sbjct: 361  WKYERNGSADSAVGSSRSSHVLASSYSSGNGRGIYSERAQNRGSARAAPVWLETGEAVAN 420

Query: 893  MYSEHREEARDHARLRNAYFDQARQAYLIGNKALAKELSIKGQLHSMHMKEAHGKAQESI 714
            MYSE REEARDHARLRNAYF+QARQAYLIGNKALAKELS+KGQLH+MHMK AHGKAQESI
Sbjct: 421  MYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQESI 480

Query: 713  YRQRN---ADVPGYGRGQERMIDLHGLHVNEAIHRLRNELSALRNAARSADQRLQVYICV 543
            YR RN   +++ G GRG ERMIDLHGLHV+EAIH L++ELS LR+ AR+ADQRLQVYICV
Sbjct: 481  YRLRNPISSEMQGNGRGHERMIDLHGLHVSEAIHVLKHELSVLRSTARAADQRLQVYICV 540

Query: 542  GTGHHTKGSRTPARLPVAVEQYLLQEEGLDYTEPQAGLLR 423
            GTGHHT+GSRTPARLP+AV+QYLL+EEGLDYTEPQ GLLR
Sbjct: 541  GTGHHTRGSRTPARLPIAVQQYLLEEEGLDYTEPQPGLLR 580


>gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 581

 Score =  744 bits (1922), Expect = 0.0
 Identities = 380/582 (65%), Positives = 450/582 (77%), Gaps = 7/582 (1%)
 Frame = -3

Query: 2135 MNLSRKGISNNTSTLNTGTKATALNPNAAEFVPFSLRATPV----STNPAEVSAWVDASG 1968
            M+LS+KG   N + LN  +KAT LNPNAAEFVPFSLR++      ++N A+ +     SG
Sbjct: 1    MSLSKKGSLTNDTKLNLPSKATTLNPNAAEFVPFSLRSSSSPSGSTSNSADAATKFTTSG 60

Query: 1967 TSGKTVLDRXXXXXXXXXXXEAHQYWRHHLPDDITPDFKFLEENESQGPSSLSFENLSIN 1788
            T GK VLDR           EAHQ+WRH LPDDITPDFK + ++ESQG   LS   LS++
Sbjct: 61   TVGKAVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMSDDESQGLGGLSLAGLSLH 120

Query: 1787 DVGEIPSFPAPTGGGLILSKQHDLSSHGINQNSLIGKMRHTATPYVSDQSSAGFVNLPSN 1608
            D  E+P F A +  G +L++Q + S   +N +S   KMR+ +  Y  D SSA F+NLP+ 
Sbjct: 121  D-SEVPRFHASSRSGYVLTEQQEPSPRHMNGSSFGEKMRYPSASYGEDPSSASFLNLPTK 179

Query: 1607 PWEKQFANGDQLLGNGREGLPYNGNSGTKFMNDVLSEHAVSDDSEINPVELLASNFPGFA 1428
            PW+KQ ANGD LLGNGRE  PYNGNS   F +++L EHA+ DD+EINP+  LAS FPGFA
Sbjct: 180  PWDKQIANGDHLLGNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLGFLASQFPGFA 239

Query: 1427 AESLAEVYYANGCDLNLTIDMLTQLELQVDGGFNQNLNSKTLSAPNLSALDFPALSESDG 1248
             ESLAEVY+A+GCDLNLT++MLTQLELQVDG FNQN NSKTLSAPNLSALDFPAL+  D 
Sbjct: 240  TESLAEVYFASGCDLNLTVEMLTQLELQVDGSFNQNTNSKTLSAPNLSALDFPALTVLDN 299

Query: 1247 QNGLEKYAGDILQHSTSPYRSADKDNLFFFKTGTSVQPRGATNFASAVKKLASQDPGQFK 1068
            QNG  KY GD LQ ++ PYRS++KDN   FK G S   RGA +FASAV+KLASQD   +K
Sbjct: 300  QNGSSKYTGDDLQQASVPYRSSNKDNTLLFKPGGSFSSRGAVDFASAVRKLASQDSSMWK 359

Query: 1067 YERYGSANPSVGSSRNSQILASSYGGGQGRSAYGDRSQNYGSARGAPVWLETGEAVANMY 888
            ++R GSA+ +VGSSR+S +L S+YGGG GR  Y DR Q+ GS R APVWLETGEAVANMY
Sbjct: 360  HDRNGSADSTVGSSRSSHVLPSAYGGGHGRGIYADRLQSRGSGRQAPVWLETGEAVANMY 419

Query: 887  SEHREEARDHARLRNAYFDQARQAYLIGNKALAKELSIKGQLHSMHMKEAHGKAQESIYR 708
            SE REEARDHARLRNAYF+QARQAYLIGNKALAKELS+KGQLH+MHMKEAHGKAQESIY 
Sbjct: 420  SEMREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKEAHGKAQESIYH 479

Query: 707  QRN---ADVPGYGRGQERMIDLHGLHVNEAIHRLRNELSALRNAARSADQRLQVYICVGT 537
            QRN    ++ G GRG E+MIDLHGLHV EAIH L++ELS LR+ A++ADQRLQVYICVGT
Sbjct: 480  QRNPVSLEMQGTGRGHEQMIDLHGLHVTEAIHVLKHELSVLRSTAQAADQRLQVYICVGT 539

Query: 536  GHHTKGSRTPARLPVAVEQYLLQEEGLDYTEPQAGLLRVVIY 411
            GHHT+GSRTPARLPVAV++YLL+EEGLDYTEP  GLLRVVIY
Sbjct: 540  GHHTRGSRTPARLPVAVQRYLLEEEGLDYTEPHPGLLRVVIY 581