BLASTX nr result
ID: Cimicifuga21_contig00005394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00005394
(1441 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi... 551 e-154
emb|CBI20322.3| unnamed protein product [Vitis vinifera] 551 e-154
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi... 551 e-154
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera] 548 e-153
ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|2... 532 e-149
>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial-like [Vitis vinifera]
Length = 506
Score = 551 bits (1421), Expect = e-154
Identities = 269/452 (59%), Positives = 339/452 (75%)
Frame = -3
Query: 1358 MNSKFFSTMNRLKLANLQSNLKSSETFLKNTVSSRSYYKGKFAKTNLYSRISPLGNPTIS 1179
M+S+ FS + + QS ++ KN +S+R+YY ++ K +LY++ISPLG+P S
Sbjct: 1 MDSRLFSLLRQSIQQYPQSLIR------KNPISNRTYYTSRYGKISLYNKISPLGDPNTS 54
Query: 1178 LTPELDKWVEEGKKVKFVELQXXXXXXXXXXRYTHALEVSEWMRDRGVCTFTSSEHAVLL 999
+ PELD WV+ G KV ELQ R++ ALE+SEWM +G+C F+ +EHAV L
Sbjct: 55 VVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKKGICAFSPTEHAVQL 114
Query: 998 DLIGRVHGLDSAESYFNNMSDENKTDKTYGALLNCYVKACETDKSLSHMQRMKEMGFASS 819
DLIGRV G SAESYFN++ + +KTDKTYGALLNCYV+ +TDKSLSH+Q+MKEMGFASS
Sbjct: 115 DLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASS 174
Query: 818 ALCYNDLMCLYTNTEEYEKVPDVLSEMKANGVTPDNFSFRLCINSYGAKSNIDEMEKVLG 639
L YND+MCLYTN ++EKVPDVL+EMK + V PDNFS+R+CINSYGA+S+I ME VL
Sbjct: 175 PLTYNDIMCLYTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLK 234
Query: 638 EMENQPHITMDWNTYSTVANFYIKAGLTDKAVSTLKKSEEKLGKKDHLGYNHLISLYAKF 459
EME QPHI MDWNTY+ ANFYIKAGL DKA+ LKKSEE+L K+D LGYNHLISLYA
Sbjct: 235 EMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASL 294
Query: 458 GNKAEMMRLWELKKIASKKYINADYVAMLSSLVKIDELEEAEKVFKEWESSGNSCDFRVP 279
GNKAE++RLW L+K A K+ IN DY+ ML SLV++ ELEEAEKV +EWESSGN DFRVP
Sbjct: 295 GNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVP 354
Query: 278 NVLLIGYSKRGLLDKAEEMLKNLTDDGKSPIANSWGIVAGGYVKMDAMEKAMKCMMNAFH 99
N+++IGYS++GL +KAE MLK L + GK NSWG VA GY+ MEKA++CM A
Sbjct: 355 NIVIIGYSEKGLFEKAEAMLKELMEKGKITTPNSWGTVASGYMDEGEMEKAVECMKAAIS 414
Query: 98 VDTSGGGWKPNPKVISTILQWLGDEGQVEEVE 3
+ + G KPN +VI+ IL WLGD+G+VE+VE
Sbjct: 415 LHVNNKGRKPNSRVIAGILSWLGDKGRVEDVE 446
>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 551 bits (1421), Expect = e-154
Identities = 276/446 (61%), Positives = 333/446 (74%)
Frame = -3
Query: 1340 STMNRLKLANLQSNLKSSETFLKNTVSSRSYYKGKFAKTNLYSRISPLGNPTISLTPELD 1161
S NRLK SN S+T + N S RS Y G+FA NLYSRISPLG P +SL P LD
Sbjct: 4 SIFNRLK-----SNRHVSQTLISNVCSVRSVYTGRFANINLYSRISPLGTPNLSLVPVLD 58
Query: 1160 KWVEEGKKVKFVELQXXXXXXXXXXRYTHALEVSEWMRDRGVCTFTSSEHAVLLDLIGRV 981
+WVEEGKKV+ VEL RY ALEVSEWM + +C F+ S AV LDLIG+V
Sbjct: 59 QWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKELCPFSPSARAVQLDLIGQV 118
Query: 980 HGLDSAESYFNNMSDENKTDKTYGALLNCYVKACETDKSLSHMQRMKEMGFASSALCYND 801
GL+SAE+YFNNMS E K DK YGALLNCYV+ DKSLSH+Q+MKE+GFAS+ L YN
Sbjct: 119 RGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPYNG 178
Query: 800 LMCLYTNTEEYEKVPDVLSEMKANGVTPDNFSFRLCINSYGAKSNIDEMEKVLGEMENQP 621
LMCLY NT++ EK+PDVLSEM+ NG++PDNFS+RLCINSYGA+S+++ MEK+L EME++
Sbjct: 179 LMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKS 238
Query: 620 HITMDWNTYSTVANFYIKAGLTDKAVSTLKKSEEKLGKKDHLGYNHLISLYAKFGNKAEM 441
HI +DW TYS VANFYIKAGL +KA+ LKK+E KL KD LGYNHLISLYA G+KAEM
Sbjct: 239 HIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKL-HKDPLGYNHLISLYASLGSKAEM 297
Query: 440 MRLWELKKIASKKYINADYVAMLSSLVKIDELEEAEKVFKEWESSGNSCDFRVPNVLLIG 261
MRLWE +K ASKK IN DY+ ML SLVK+ ELE+ E + KEWESSGN DFRVPN LLIG
Sbjct: 298 MRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIG 357
Query: 260 YSKRGLLDKAEEMLKNLTDDGKSPIANSWGIVAGGYVKMDAMEKAMKCMMNAFHVDTSGG 81
+ ++GL++KAE ML+++ ++GK+P NSW IVA GY++ MEKA +CM A V
Sbjct: 358 FCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENK 417
Query: 80 GWKPNPKVISTILQWLGDEGQVEEVE 3
GW+P PKVIS+IL WLGD VEEVE
Sbjct: 418 GWRPKPKVISSILSWLGDNRDVEEVE 443
>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
mitochondrial [Vitis vinifera]
Length = 504
Score = 551 bits (1421), Expect = e-154
Identities = 276/446 (61%), Positives = 333/446 (74%)
Frame = -3
Query: 1340 STMNRLKLANLQSNLKSSETFLKNTVSSRSYYKGKFAKTNLYSRISPLGNPTISLTPELD 1161
S NRLK SN S+T + N S RS Y G+FA NLYSRISPLG P +SL P LD
Sbjct: 4 SIFNRLK-----SNRHVSQTLISNVCSVRSVYTGRFANINLYSRISPLGTPNLSLVPVLD 58
Query: 1160 KWVEEGKKVKFVELQXXXXXXXXXXRYTHALEVSEWMRDRGVCTFTSSEHAVLLDLIGRV 981
+WVEEGKKV+ VEL RY ALEVSEWM + +C F+ S AV LDLIG+V
Sbjct: 59 QWVEEGKKVRDVELHRIIRDLRSRKRYAQALEVSEWMSSKELCPFSPSARAVQLDLIGQV 118
Query: 980 HGLDSAESYFNNMSDENKTDKTYGALLNCYVKACETDKSLSHMQRMKEMGFASSALCYND 801
GL+SAE+YFNNMS E K DK YGALLNCYV+ DKSLSH+Q+MKE+GFAS+ L YN
Sbjct: 119 RGLESAENYFNNMSAEEKIDKMYGALLNCYVRERVIDKSLSHLQKMKELGFASTPLPYNG 178
Query: 800 LMCLYTNTEEYEKVPDVLSEMKANGVTPDNFSFRLCINSYGAKSNIDEMEKVLGEMENQP 621
LMCLY NT++ EK+PDVLSEM+ NG++PDNFS+RLCINSYGA+S+++ MEK+L EME++
Sbjct: 179 LMCLYINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKS 238
Query: 620 HITMDWNTYSTVANFYIKAGLTDKAVSTLKKSEEKLGKKDHLGYNHLISLYAKFGNKAEM 441
HI +DW TYS VANFYIKAGL +KA+ LKK+E KL KD LGYNHLISLYA G+KAEM
Sbjct: 239 HIHIDWMTYSMVANFYIKAGLNEKALFFLKKAETKL-HKDPLGYNHLISLYASLGSKAEM 297
Query: 440 MRLWELKKIASKKYINADYVAMLSSLVKIDELEEAEKVFKEWESSGNSCDFRVPNVLLIG 261
MRLWE +K ASKK IN DY+ ML SLVK+ ELE+ E + KEWESSGN DFRVPN LLIG
Sbjct: 298 MRLWERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIG 357
Query: 260 YSKRGLLDKAEEMLKNLTDDGKSPIANSWGIVAGGYVKMDAMEKAMKCMMNAFHVDTSGG 81
+ ++GL++KAE ML+++ ++GK+P NSW IVA GY++ MEKA +CM A V
Sbjct: 358 FCQKGLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENK 417
Query: 80 GWKPNPKVISTILQWLGDEGQVEEVE 3
GW+P PKVIS+IL WLGD VEEVE
Sbjct: 418 GWRPKPKVISSILSWLGDNRDVEEVE 443
>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
Length = 506
Score = 548 bits (1413), Expect = e-153
Identities = 268/452 (59%), Positives = 339/452 (75%)
Frame = -3
Query: 1358 MNSKFFSTMNRLKLANLQSNLKSSETFLKNTVSSRSYYKGKFAKTNLYSRISPLGNPTIS 1179
M+S+ FS + + QS ++ KN +S+R+YY ++ K +LY++ISPLG+P S
Sbjct: 1 MDSRLFSLLRQSIQQYPQSLIR------KNPISNRTYYTSRYGKISLYNKISPLGDPNTS 54
Query: 1178 LTPELDKWVEEGKKVKFVELQXXXXXXXXXXRYTHALEVSEWMRDRGVCTFTSSEHAVLL 999
+ PELD WV+ G KV ELQ R++ ALE+SEWM +G+C F+ +EHAV L
Sbjct: 55 VVPELDNWVQNGNKVWVAELQRIIHDLRKRKRFSQALEISEWMSKKGICAFSPTEHAVQL 114
Query: 998 DLIGRVHGLDSAESYFNNMSDENKTDKTYGALLNCYVKACETDKSLSHMQRMKEMGFASS 819
DLIGRV G SAESYFN++ + +KTDKTYGALLNCYV+ +TDKSLSH+Q+MKEMGFASS
Sbjct: 115 DLIGRVRGFLSAESYFNSLQNHDKTDKTYGALLNCYVRQRQTDKSLSHLQKMKEMGFASS 174
Query: 818 ALCYNDLMCLYTNTEEYEKVPDVLSEMKANGVTPDNFSFRLCINSYGAKSNIDEMEKVLG 639
L YND+MCLYTN ++EKVPDVL+EMK + V PDNFS+R+CINSY A+S+I MEKVL
Sbjct: 175 PLTYNDIMCLYTNVGQHEKVPDVLTEMKQSHVYPDNFSYRICINSYAAQSDIQGMEKVLK 234
Query: 638 EMENQPHITMDWNTYSTVANFYIKAGLTDKAVSTLKKSEEKLGKKDHLGYNHLISLYAKF 459
EME QPHI MDWNTY+ ANFYIKAGL DKA+ LKKSEE+L K+D LGYNHLISLYA
Sbjct: 235 EMERQPHIVMDWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASL 294
Query: 458 GNKAEMMRLWELKKIASKKYINADYVAMLSSLVKIDELEEAEKVFKEWESSGNSCDFRVP 279
GNKAE++RLW L+K A K+ IN DY+ ML SLV++ ELEEAEKV +EWESSGN DFRVP
Sbjct: 295 GNKAEVLRLWSLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVP 354
Query: 278 NVLLIGYSKRGLLDKAEEMLKNLTDDGKSPIANSWGIVAGGYVKMDAMEKAMKCMMNAFH 99
N+++IGYS++GL +KAE MLK L + GK +SWG VA GY+ MEKA++CM A
Sbjct: 355 NIVIIGYSEKGLFEKAEAMLKELMEKGKITTPDSWGTVASGYMDEGEMEKAVECMKAAIS 414
Query: 98 VDTSGGGWKPNPKVISTILQWLGDEGQVEEVE 3
+ + G KPN +VI+ IL WLGD+G+VE+VE
Sbjct: 415 LHVNNKGRKPNSRVIAGILSWLGDKGRVEDVE 446
>ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|222848105|gb|EEE85652.1|
predicted protein [Populus trichocarpa]
Length = 492
Score = 532 bits (1371), Expect = e-149
Identities = 254/424 (59%), Positives = 318/424 (75%)
Frame = -3
Query: 1274 KNTVSSRSYYKGKFAKTNLYSRISPLGNPTISLTPELDKWVEEGKKVKFVELQXXXXXXX 1095
+NT+ +RSYY K K LYS+ISPLG+ T SL PELD WV G KV+ ELQ
Sbjct: 14 QNTIITRSYYTNKANKATLYSKISPLGS-TPSLEPELDSWVRSGNKVRVAELQRIIHDLR 72
Query: 1094 XXXRYTHALEVSEWMRDRGVCTFTSSEHAVLLDLIGRVHGLDSAESYFNNMSDENKTDKT 915
R++HAL+VSEWM + +C F+ SEHAV LDLIGRVHG SAE+YFNN+ D++K +KT
Sbjct: 73 KRKRFSHALQVSEWMHKKDICIFSPSEHAVQLDLIGRVHGFVSAENYFNNLRDQDKNEKT 132
Query: 914 YGALLNCYVKACETDKSLSHMQRMKEMGFASSALCYNDLMCLYTNTEEYEKVPDVLSEMK 735
YGALLNCYV+ ETDKS+ H+Q+MKEMGFA S+L YND+MCLYTN ++EKVP VL+EMK
Sbjct: 133 YGALLNCYVRQRETDKSILHLQKMKEMGFAKSSLTYNDIMCLYTNVGQHEKVPQVLNEMK 192
Query: 734 ANGVTPDNFSFRLCINSYGAKSNIDEMEKVLGEMENQPHITMDWNTYSTVANFYIKAGLT 555
N V PDNFS+RLCINS+GA+ +++ MEK+L EME+QP I MDWNTY+ ANFYI LT
Sbjct: 193 ENNVLPDNFSYRLCINSFGARDDLEGMEKILNEMEHQPDIVMDWNTYAVAANFYIIGDLT 252
Query: 554 DKAVSTLKKSEEKLGKKDHLGYNHLISLYAKFGNKAEMMRLWELKKIASKKYINADYVAM 375
DKA+ TLKKSE +L KKD GYNHLISLYAK GNK E++RLW+L+K A +++IN DY+ M
Sbjct: 253 DKAIDTLKKSEARLDKKDGTGYNHLISLYAKLGNKTEVLRLWDLEKSACERHINKDYIIM 312
Query: 374 LSSLVKIDELEEAEKVFKEWESSGNSCDFRVPNVLLIGYSKRGLLDKAEEMLKNLTDDGK 195
+ SL+K+ E EEAEK+ KEWESSGN D RVPN L+IGYS++GL +KA+ +L+NLT+ GK
Sbjct: 313 MESLLKLSEFEEAEKMLKEWESSGNFYDVRVPNTLIIGYSRKGLCEKAKALLENLTEKGK 372
Query: 194 SPIANSWGIVAGGYVKMDAMEKAMKCMMNAFHVDTSGGGWKPNPKVISTILQWLGDEGQV 15
+ NSWGIVA G+ + KA CM A + GWKPN +VI+ IL WLGDEG
Sbjct: 373 MTLPNSWGIVAAGFFDKSEVAKAFSCMKAALCLYVENKGWKPNQRVINGILSWLGDEGSA 432
Query: 14 EEVE 3
E+ E
Sbjct: 433 EDAE 436