BLASTX nr result

ID: Cimicifuga21_contig00005283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005283
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265117.2| PREDICTED: serine/threonine-protein kinase A...   143   1e-32
ref|XP_002522939.1| Protein kinase APK1B, chloroplast precursor,...   132   2e-29
emb|CBW30202.1| Protein kinase APK1B [Musa balbisiana]                130   1e-28
ref|NP_001168686.1| uncharacterized LOC100382475 [Zea mays] gi|2...   130   1e-28
ref|XP_002438802.1| hypothetical protein SORBIDRAFT_10g026500 [S...   130   1e-28

>ref|XP_002265117.2| PREDICTED: serine/threonine-protein kinase At5g01020-like [Vitis
           vinifera]
          Length = 512

 Score =  143 bits (361), Expect = 1e-32
 Identities = 81/135 (60%), Positives = 91/135 (67%), Gaps = 8/135 (5%)
 Frame = -1

Query: 508 REHNLVEWARPLLNH-RKLLKILDPRMDGQYSAKAAQKVALLAYQCLSQNPKGRPAMSQV 332
           REHNLVEWARPLLNH +KLL+ILDPRM+GQYS K A KVA LAYQCLSQNPKGRP MSQV
Sbjct: 358 REHNLVEWARPLLNHNKKLLRILDPRMEGQYSTKMALKVANLAYQCLSQNPKGRPVMSQV 417

Query: 331 VEILEAFQTPSDN------QVSGASSVTLYEVKSLPADAIGKRSPRERQVESTPDMHPKH 170
           VEILE   T S+N      Q  G+S VTLYEV   P D       +++      +    H
Sbjct: 418 VEILETIATQSENQEEAMLQSGGSSCVTLYEV---PKDTHSNPDKKQKPTNMDGEKGETH 474

Query: 169 QS-KPAKNRSKSEPP 128
           Q  KP+  RSKSEPP
Sbjct: 475 QKRKPSNGRSKSEPP 489


>ref|XP_002522939.1| Protein kinase APK1B, chloroplast precursor, putative [Ricinus
           communis] gi|223537833|gb|EEF39450.1| Protein kinase
           APK1B, chloroplast precursor, putative [Ricinus
           communis]
          Length = 438

 Score =  132 bits (333), Expect = 2e-29
 Identities = 80/142 (56%), Positives = 91/142 (64%), Gaps = 4/142 (2%)
 Frame = -1

Query: 508 REHNLVEWARPLLNH-RKLLKILDPRMDGQYSAKAAQKVALLAYQCLSQNPKGRPAMSQV 332
           REHNLVEWARPLLNH +K+L+ILDPRM+GQY+ K A KVA LAYQCLSQNPKGRP MSQV
Sbjct: 307 REHNLVEWARPLLNHNKKVLRILDPRMEGQYTVKTAMKVANLAYQCLSQNPKGRPLMSQV 366

Query: 331 VEILEAFQTPSDNQV--SGASSVTLYEVKSL-PADAIGKRSPRERQVESTPDMHPKHQSK 161
           VE+LE  QT  ++    S  + VTLYE   L P    GK+ P  R             S 
Sbjct: 367 VELLEGVQTQDEDAFFQSNDTGVTLYEDPGLSPFTPHGKKDPTTR-------------SN 413

Query: 160 PAKNRSKSEPPPADSDLYNPSS 95
            +K RS SE P  D DLY  SS
Sbjct: 414 QSKGRSNSE-PSVDHDLYPTSS 434


>emb|CBW30202.1| Protein kinase APK1B [Musa balbisiana]
          Length = 449

 Score =  130 bits (327), Expect = 1e-28
 Identities = 77/146 (52%), Positives = 93/146 (63%), Gaps = 7/146 (4%)
 Frame = -1

Query: 508 REHNLVEWARPLL-NHRKLLKILDPRMDGQYSAKAAQKVALLAYQCLSQNPKGRPAMSQV 332
           R  NLVEWARPLL N RKLLKILDPRM+GQYS + A  VA LAY+CLSQNPKGRP M+QV
Sbjct: 284 RHQNLVEWARPLLINGRKLLKILDPRMEGQYSNRVATDVASLAYRCLSQNPKGRPTMNQV 343

Query: 331 VEILEAFQTPSDNQ-----VSGASSVTLYEV-KSLPADAIGKRSPRERQVESTPDMHPKH 170
           VE LE  Q   +N       S  ++VTLYE  K + +D + K S      E+  ++H K 
Sbjct: 344 VESLENLQDLPENWEGILFQSSEAAVTLYEAPKEIVSDHLEKNS--SENGENGENVHAKG 401

Query: 169 QSKPAKNRSKSEPPPADSDLYNPSSE 92
           + K    RS SEPPP +   Y+PS E
Sbjct: 402 RKKLGNGRSNSEPPPVEFSQYSPSPE 427


>ref|NP_001168686.1| uncharacterized LOC100382475 [Zea mays] gi|223950221|gb|ACN29194.1|
           unknown [Zea mays] gi|413955029|gb|AFW87678.1| putative
           protein kinase superfamily protein [Zea mays]
          Length = 465

 Score =  130 bits (327), Expect = 1e-28
 Identities = 80/155 (51%), Positives = 102/155 (65%), Gaps = 16/155 (10%)
 Frame = -1

Query: 508 REHNLVEWARPLLNH-RKLLKILDPRMDGQYSAKAAQKVALLAYQCLSQNPKGRPAMSQV 332
           REHNLV+WARPLL H RKL +I+DPRM+GQYS KAA +VA LAY+CLSQNPKGRP MSQV
Sbjct: 285 REHNLVDWARPLLVHNRKLFRIIDPRMEGQYSTKAATEVASLAYRCLSQNPKGRPTMSQV 344

Query: 331 VEILEAFQTPSD-------NQVSGASSVTLYEVKSLPADAIG-KRSPRERQVEST--PDM 182
           VE  EA Q   +       N ++GA  VTLYEV   PAD +  +++ +E  V+S   P M
Sbjct: 345 VETFEAVQNMPECQDILLQNSITGA--VTLYEVPKEPADRVELEKAKQEPAVKSAAMPPM 402

Query: 181 HPK-----HQSKPAKNRSKSEPPPADSDLYNPSSE 92
           + K      +++P   RSKSE P  +  +Y PS +
Sbjct: 403 NGKPVPQSRRTRPGNGRSKSE-PSLECKMYIPSPD 436


>ref|XP_002438802.1| hypothetical protein SORBIDRAFT_10g026500 [Sorghum bicolor]
           gi|241917025|gb|EER90169.1| hypothetical protein
           SORBIDRAFT_10g026500 [Sorghum bicolor]
          Length = 466

 Score =  130 bits (326), Expect = 1e-28
 Identities = 77/156 (49%), Positives = 95/156 (60%), Gaps = 17/156 (10%)
 Frame = -1

Query: 508 REHNLVEWARPLLNH-RKLLKILDPRMDGQYSAKAAQKVALLAYQCLSQNPKGRPAMSQV 332
           REHNLV+WARPLL H RKL +I+DPRM+GQYS KAA +VA LAY+CLSQNPKGRP MSQV
Sbjct: 285 REHNLVDWARPLLVHNRKLFRIIDPRMEGQYSTKAAIEVASLAYRCLSQNPKGRPTMSQV 344

Query: 331 VEILEAFQTPSD-------NQVSGASSVTLYEVKSLPADAIGKRSPRERQVESTPDMHP- 176
           VE  EA Q   +       N ++GA  VTLYEV   PAD +     ++     T  M P 
Sbjct: 345 VETFEAVQNMPECQDILLQNSITGA--VTLYEVPKEPADRVELEKAKQEPAVKTTAMPPP 402

Query: 175 --------KHQSKPAKNRSKSEPPPADSDLYNPSSE 92
                     +++P   RSKSE P  +  +Y PS +
Sbjct: 403 VNGKPVPQSRRTRPGNGRSKSE-PSLECKMYIPSPD 437


Top