BLASTX nr result

ID: Cimicifuga21_contig00005281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005281
         (1780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276676.1| PREDICTED: solute carrier family 25 member 4...   479   e-132
ref|XP_002521354.1| Mitochondrial carrier protein RIM2, putative...   475   e-131
ref|XP_002516110.1| protein with unknown function [Ricinus commu...   454   e-125
ref|XP_002324186.1| predicted protein [Populus trichocarpa] gi|1...   451   e-124
ref|XP_004141810.1| PREDICTED: solute carrier family 25 member 4...   450   e-124

>ref|XP_002276676.1| PREDICTED: solute carrier family 25 member 44-like isoform 1 [Vitis
            vinifera] gi|359482721|ref|XP_003632815.1| PREDICTED:
            solute carrier family 25 member 44-like [Vitis vinifera]
          Length = 358

 Score =  479 bits (1233), Expect = e-132
 Identities = 250/359 (69%), Positives = 276/359 (76%), Gaps = 8/359 (2%)
 Frame = +3

Query: 576  MSYEAAEEDSAQEIHLPADIDWQMLDKSKFFVLGAALFSGVSATLYPVVVLKTRQQISQT 755
            MS  AAEEDSAQEIHLPADIDW+MLDKSKFF LGAALFSGVSATLYPVVVLKTRQQI+Q+
Sbjct: 1    MSLSAAEEDSAQEIHLPADIDWEMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQIAQS 60

Query: 756  QVSSIKTGISILRYEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFTE 935
            QVSSI+T  SI+R+EG R LYRGFGTSLMGTIPARALYMTALEVTKSNVG ATV+LGF E
Sbjct: 61   QVSSIRTAFSIVRHEGFRALYRGFGTSLMGTIPARALYMTALEVTKSNVGTATVRLGFPE 120

Query: 936  XXXXXXXXXXXXXXXXMAAQLVWTPVDVISQRLMVQGGH--------XXXXXXXXXXXXP 1091
                            MAAQLVWTP+DV+SQRLMVQGG                      
Sbjct: 121  PTAAAIANAAAGLSAAMAAQLVWTPIDVVSQRLMVQGGGGGGGGGGCGPGEKLKIPNASS 180

Query: 1092 CKYRSGLDAFQKILKADGIRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGYSCYFR 1271
            CKY  G+DAF+KIL  DG RGLYRGFG+SILTYAPSNAVWWASYSV QRL+W G   Y  
Sbjct: 181  CKYLGGIDAFRKILNTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLIWSGIGVYLC 240

Query: 1272 KKDEDCKDGNSISNCFRPDTKSVVAVQGLSAAMAGGVSALITMPLDTIKTRLQVLDGDDN 1451
            KKD++  + N +S  FRPD+K+V+AVQG+SAAMAGGVSALITMPLDTIKTRLQVLDG++N
Sbjct: 241  KKDDETGE-NGVST-FRPDSKTVMAVQGVSAAMAGGVSALITMPLDTIKTRLQVLDGEEN 298

Query: 1452 GRRPPTIGQTVKNLVREGGWAACYRGLGPRWXXXXXXXXXXXXXYELLKRLSTKNQDIM 1628
            GRR PTIGQTV+NLVREGGW ACYRGLGPRW             YE LKRLS KNQ+ +
Sbjct: 299  GRRGPTIGQTVRNLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEAL 357


>ref|XP_002521354.1| Mitochondrial carrier protein RIM2, putative [Ricinus communis]
            gi|223539432|gb|EEF41022.1| Mitochondrial carrier protein
            RIM2, putative [Ricinus communis]
          Length = 343

 Score =  475 bits (1223), Expect = e-131
 Identities = 238/351 (67%), Positives = 278/351 (79%)
 Frame = +3

Query: 576  MSYEAAEEDSAQEIHLPADIDWQMLDKSKFFVLGAALFSGVSATLYPVVVLKTRQQISQT 755
            M+  AAE++S +EIH+PA+IDW+MLDKSKFF LGAALFSGVSATLYP+VVLKTRQQ++Q+
Sbjct: 1    MNLSAAEDESEKEIHIPAEIDWEMLDKSKFFFLGAALFSGVSATLYPIVVLKTRQQVAQS 60

Query: 756  QVSSIKTGISILRYEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFTE 935
            QVS IKTG  ++R EG R LYRGFGTSLMGTIPARALYM ALEVTKSNVG ATV LGFTE
Sbjct: 61   QVSCIKTGFGMVRLEGFRALYRGFGTSLMGTIPARALYMGALEVTKSNVGTATVGLGFTE 120

Query: 936  XXXXXXXXXXXXXXXXMAAQLVWTPVDVISQRLMVQGGHXXXXXXXXXXXXPCKYRSGLD 1115
                            +AAQLVWTP+DV+SQRLMVQG               CKY +G+D
Sbjct: 121  ATAATTANAVAGLSAALAAQLVWTPIDVVSQRLMVQGA--------GNASTTCKYSNGID 172

Query: 1116 AFQKILKADGIRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGYSCYFRKKDEDCKD 1295
            AF+KI+ +DG+RGLYRGFG+SILTYAPSNAVWWASYSV QR+VWGG  CYF KK +D  +
Sbjct: 173  AFRKIITSDGLRGLYRGFGISILTYAPSNAVWWASYSVAQRMVWGGVGCYFSKKHQDGVN 232

Query: 1296 GNSISNCFRPDTKSVVAVQGLSAAMAGGVSALITMPLDTIKTRLQVLDGDDNGRRPPTIG 1475
             +S +N  +PD+K+V+AVQG+SAAMAGGVSALITMPLDTIKTR+QVLDG++NGRR PTIG
Sbjct: 233  VDS-NNTLKPDSKTVMAVQGVSAAMAGGVSALITMPLDTIKTRMQVLDGEENGRRGPTIG 291

Query: 1476 QTVKNLVREGGWAACYRGLGPRWXXXXXXXXXXXXXYELLKRLSTKNQDIM 1628
            QTV+NLVREGGW ACYRGLGPRW             YE LKRLSTKNQ+++
Sbjct: 292  QTVRNLVREGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSTKNQEVL 342


>ref|XP_002516110.1| protein with unknown function [Ricinus communis]
            gi|223544596|gb|EEF46112.1| protein with unknown function
            [Ricinus communis]
          Length = 353

 Score =  454 bits (1168), Expect = e-125
 Identities = 234/353 (66%), Positives = 270/353 (76%), Gaps = 4/353 (1%)
 Frame = +3

Query: 576  MSYEAAEEDSAQEIHLPADIDWQMLDKSKFFVLGAALFSGVSATLYPVVVLKTRQQISQT 755
            MS  AAE+DSA EIH+PA+IDW MLDKSKFF LGAALFSGVSA LYPVVVLKTRQQ+S T
Sbjct: 1    MSLGAAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVSPT 60

Query: 756  QVSSIKTGISILRYEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFTE 935
            Q+ ++K   SI+R+EGIRG YRGFGTSLMGTIPARALYMTALEVTKS+VG ATV+LGF++
Sbjct: 61   QIPTLKLSYSIMRHEGIRGFYRGFGTSLMGTIPARALYMTALEVTKSSVGTATVRLGFSD 120

Query: 936  XXXXXXXXXXXXXXXXMAAQLVWTPVDVISQRLMVQG---GHXXXXXXXXXXXXPCKYRS 1106
                            MAAQLVWTP+DV+SQRLMVQG    +              +YR+
Sbjct: 121  TTATAIANAAAGLSSAMAAQLVWTPIDVVSQRLMVQGCSYSNSKSSSNVIPNLDSSRYRN 180

Query: 1107 GLDAFQKILKADGIRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGYSCYFRKKDED 1286
            G+DAF+KIL ADG RGLYRGFG+SILTYAPSNAVWWASYSV  RLVWGG +CY  KKDE 
Sbjct: 181  GIDAFRKILYADGPRGLYRGFGISILTYAPSNAVWWASYSVAHRLVWGGIACYTNKKDES 240

Query: 1287 CKDGNSISNCFRPDTKSVVAVQGLSAAMAGGVSALITMPLDTIKTRLQVLDGDDNGRRPP 1466
            C +G      +RPD+K++VAVQGL AAMA GVSA+ITMPLDT+KTR+QVLDG+ NGRR P
Sbjct: 241  CVNGCG----YRPDSKAMVAVQGLCAAMASGVSAMITMPLDTVKTRMQVLDGEQNGRRQP 296

Query: 1467 -TIGQTVKNLVREGGWAACYRGLGPRWXXXXXXXXXXXXXYELLKRLSTKNQD 1622
             T+ QTVKNLV+EGG+AACYRGLGPRW             YE LKRLSTK+ +
Sbjct: 297  LTVMQTVKNLVKEGGFAACYRGLGPRWVSMSMSATTMITTYEFLKRLSTKSSE 349


>ref|XP_002324186.1| predicted protein [Populus trichocarpa] gi|118489115|gb|ABK96364.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222865620|gb|EEF02751.1| predicted protein [Populus
            trichocarpa]
          Length = 356

 Score =  451 bits (1159), Expect = e-124
 Identities = 234/354 (66%), Positives = 268/354 (75%), Gaps = 5/354 (1%)
 Frame = +3

Query: 576  MSYEAAEEDSAQEIHLPADIDWQMLDKSKFFVLGAALFSGVSATLYPVVVLKTRQQISQT 755
            MS  AAE++SA EIHLPADIDW MLDKSKFF LGAALFSGVSA LYPVVVLKTRQQ+  T
Sbjct: 1    MSLSAAEDNSASEIHLPADIDWHMLDKSKFFFLGAALFSGVSAALYPVVVLKTRQQVLPT 60

Query: 756  QVSSIKTGISILRYEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFTE 935
            Q+SS+K  +SI+ +EG+RG YRGFGTSLMGTIPARALYMTALEVTKSNVG ATV+LGF++
Sbjct: 61   QISSLKLSLSIMNHEGVRGFYRGFGTSLMGTIPARALYMTALEVTKSNVGTATVRLGFSD 120

Query: 936  XXXXXXXXXXXXXXXXMAAQLVWTPVDVISQRLMVQ---GGHXXXXXXXXXXXXPCKYRS 1106
                            MAAQ+VWTP+DV+SQRLMVQ   G               C+Y +
Sbjct: 121  TTATAIANAAAGLSSAMAAQVVWTPIDVVSQRLMVQDCNGSSIKSSKNMIPSSSSCRYMN 180

Query: 1107 GLDAFQKILKADGIRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGYSCYFRKKDED 1286
            G+DAF+KIL ADG RGLYRGFG+SILTYAPSNAVWWASYSV  RLVWGG  CY  KKDE+
Sbjct: 181  GIDAFRKILNADGPRGLYRGFGISILTYAPSNAVWWASYSVAHRLVWGGIGCYASKKDEN 240

Query: 1287 CKDGNSISNC-FRPDTKSVVAVQGLSAAMAGGVSALITMPLDTIKTRLQVLDGDDNGR-R 1460
              +G     C +RP +K +VAVQG+ AAMA GVSA+ITMPLDTIKTRLQVLD ++NGR R
Sbjct: 241  AVNGG--GGCGYRPGSKEMVAVQGVCAAMASGVSAMITMPLDTIKTRLQVLDREENGRTR 298

Query: 1461 PPTIGQTVKNLVREGGWAACYRGLGPRWXXXXXXXXXXXXXYELLKRLSTKNQD 1622
            P T+ QTV+NLV+EGG+AACYRGLGPRW             YE LKRLSTKN+D
Sbjct: 299  PLTVMQTVRNLVKEGGFAACYRGLGPRWVSMSMSATTMITTYEFLKRLSTKNRD 352


>ref|XP_004141810.1| PREDICTED: solute carrier family 25 member 44-like [Cucumis sativus]
            gi|449480693|ref|XP_004155969.1| PREDICTED: solute
            carrier family 25 member 44-like [Cucumis sativus]
          Length = 351

 Score =  450 bits (1158), Expect = e-124
 Identities = 231/353 (65%), Positives = 269/353 (76%), Gaps = 4/353 (1%)
 Frame = +3

Query: 576  MSYEAAEEDSAQEIHLPADIDWQMLDKSKFFVLGAALFSGVSATLYPVVVLKTRQQISQT 755
            M+  AAEE+S QEIH+PA+IDWQMLDKSKFF LGAALFSGVSA+LYP+VVLKTRQQ+S +
Sbjct: 1    MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVSHS 60

Query: 756  QVSSIKTGISILRYEGIRGLYRGFGTSLMGTIPARALYMTALEVTKSNVGIATVQLGFTE 935
            Q+S I+T  S++R+EG R LYRGFGTSLMGTIPARALYM ALE+TKS VG AT+++GF E
Sbjct: 61   QLSCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALEITKSYVGTATIRVGFPE 120

Query: 936  XXXXXXXXXXXXXXXXMAAQLVWTPVDVISQRLMVQGGHXXXXXXXXXXXXPCKYRSGLD 1115
                            MAAQLVWTPVDV+SQRLMVQ  +               Y +G+D
Sbjct: 121  TSAATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQPRY------NNPNSSSTHYINGID 174

Query: 1116 AFQKILKADGIRGLYRGFGMSILTYAPSNAVWWASYSVTQRLVWGGYSCYFRKK----DE 1283
            AF+KILKADG+RGLYRGFG+SILTYAPSNAVWWASY V QRLVWGG  C +  K    DE
Sbjct: 175  AFRKILKADGLRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCCYHAKKVQVDE 234

Query: 1284 DCKDGNSISNCFRPDTKSVVAVQGLSAAMAGGVSALITMPLDTIKTRLQVLDGDDNGRRP 1463
            D ++G   +N ++PD+K+V+AVQG SAAMAG +SALITMPLDTIKTRLQVLDGD+NGRR 
Sbjct: 235  DNENGGYSNNVYKPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRG 294

Query: 1464 PTIGQTVKNLVREGGWAACYRGLGPRWXXXXXXXXXXXXXYELLKRLSTKNQD 1622
            PTIGQT++NLVREGGW ACYRGL PR              YE LKRLSTKNQ+
Sbjct: 295  PTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQE 347


Top