BLASTX nr result

ID: Cimicifuga21_contig00005219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005219
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi...   291   2e-76
ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|2...   263   6e-68
ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|2...   255   2e-65
ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max]       245   2e-62
gb|EEE52695.1| hypothetical protein OsJ_35092 [Oryza sativa Japo...   235   1e-59

>ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera]
            gi|297741716|emb|CBI32848.3| unnamed protein product
            [Vitis vinifera]
          Length = 293

 Score =  291 bits (745), Expect = 2e-76
 Identities = 166/287 (57%), Positives = 184/287 (64%), Gaps = 5/287 (1%)
 Frame = -3

Query: 1145 LISKSPSLFSFCSPIRR---SSGIPI--CNIGGLRGCSSCHSYKPSLNSSHGISSKYLGR 981
            L   SP LF F    R    SS IP     I  +R  S+CH +    +SS     K LGR
Sbjct: 8    LTRMSPLLFRFLGFSRNTIYSSRIPTNPIRISTVRSYSTCHFFCYPSHSSVRTVFKDLGR 67

Query: 980  SKIGFGEMGFDHFRISAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKWSLLSWYLAA 801
            S+IGF + G D+FRISAV                                WSLLSWYLA 
Sbjct: 68   SEIGFSKKGSDYFRISAVSDGGSGGTGGFGGFGDGNSGGKSEGSGGGGD-WSLLSWYLAL 126

Query: 800  LEKYPVLTKALTSAILTFIGDLVCQLAIDQVSTLDVKRXXXXXXXXXXXXGPTLHFWYLS 621
            LEKYPVLTKA+TSA LT +GDL+CQL IDQV +LD+KR            GPTLHFWYL 
Sbjct: 127  LEKYPVLTKAITSAFLTLVGDLICQLVIDQVPSLDLKRTFLFTLLGLVLVGPTLHFWYLY 186

Query: 620  LSKLVPAPGASGAFXXXXXXXXLFSPVFIGFFLSTLLTLEGRPSQIVPKLQQEWLATVLA 441
            LSKLV  PGASGAF        LFSP+FIG FLSTL+TLEGRPSQ+VPKLQQEW + VLA
Sbjct: 187  LSKLVTIPGASGAFLRLLLDQFLFSPIFIGVFLSTLVTLEGRPSQVVPKLQQEWFSAVLA 246

Query: 440  NWQLWIPFQFLNFLFVPQKFQVLAANFIALAWNVILSFKAHKAILPK 300
            NWQLWIPFQFLNF FVPQ+FQVLAAN +ALAWNVILSFKAHK ILPK
Sbjct: 247  NWQLWIPFQFLNFRFVPQQFQVLAANVVALAWNVILSFKAHKEILPK 293


>ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|222854835|gb|EEE92382.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  263 bits (672), Expect = 6e-68
 Identities = 139/236 (58%), Positives = 157/236 (66%), Gaps = 4/236 (1%)
 Frame = -3

Query: 995 KYLGRSKIGFGEMGFDHFRISAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS----KW 828
           K +G SKIGF ++ FD FR+ AV                              S     W
Sbjct: 51  KDMGGSKIGFRQLDFDQFRVLAVSGGGSGGSGRLGGSSGGGGGQGGAASGGSGSGGNRNW 110

Query: 827 SLLSWYLAALEKYPVLTKALTSAILTFIGDLVCQLAIDQVSTLDVKRXXXXXXXXXXXXG 648
           S LSWYL  L KYPVLTKA+TSAILT +GDL+CQL IDQ  +LD+KR            G
Sbjct: 111 SFLSWYLNLLAKYPVLTKAVTSAILTLMGDLICQLVIDQAPSLDLKRTFVFTFLGLVLVG 170

Query: 647 PTLHFWYLSLSKLVPAPGASGAFXXXXXXXXLFSPVFIGFFLSTLLTLEGRPSQIVPKLQ 468
           PTLHFWYL LSKLV  PGASGAF        +FSP+FIG FLSTL+TLEGRPS+++PKLQ
Sbjct: 171 PTLHFWYLYLSKLVTLPGASGAFLRLLVDQFVFSPIFIGVFLSTLVTLEGRPSEVLPKLQ 230

Query: 467 QEWLATVLANWQLWIPFQFLNFLFVPQKFQVLAANFIALAWNVILSFKAHKAILPK 300
           QEW + VLANWQLWIPFQFLNF FVPQ+FQVLAAN IAL WNVILSFKAHK +LPK
Sbjct: 231 QEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFKAHKEVLPK 286


>ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|222867843|gb|EEF04974.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  255 bits (651), Expect = 2e-65
 Identities = 124/177 (70%), Positives = 139/177 (78%)
 Frame = -3

Query: 830 WSLLSWYLAALEKYPVLTKALTSAILTFIGDLVCQLAIDQVSTLDVKRXXXXXXXXXXXX 651
           WS LSWYL  L  YPVLTKA+TSAILTF+GDL+CQL IDQV +LD+KR            
Sbjct: 88  WSFLSWYLNLLANYPVLTKAVTSAILTFMGDLICQLVIDQVPSLDLKRTFLFTLLGLVLV 147

Query: 650 GPTLHFWYLSLSKLVPAPGASGAFXXXXXXXXLFSPVFIGFFLSTLLTLEGRPSQIVPKL 471
           GPTLH WYL LSK+V  PGASGAF        +FSP+FIG FLSTL+TLEGRPSQ++PKL
Sbjct: 148 GPTLHIWYLYLSKMVTVPGASGAFLRLLADQFVFSPIFIGVFLSTLVTLEGRPSQVIPKL 207

Query: 470 QQEWLATVLANWQLWIPFQFLNFLFVPQKFQVLAANFIALAWNVILSFKAHKAILPK 300
           +QEW + VLANWQLWIPFQFLNF FVPQ+FQVLAAN IAL WNVILSFKAHK +LPK
Sbjct: 208 KQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFKAHKEVLPK 264


>ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max]
          Length = 277

 Score =  245 bits (625), Expect = 2e-62
 Identities = 123/178 (69%), Positives = 134/178 (75%)
 Frame = -3

Query: 833 KWSLLSWYLAALEKYPVLTKALTSAILTFIGDLVCQLAIDQVSTLDVKRXXXXXXXXXXX 654
           KWS LSWYLA L KYPV  KALTS+IL  IGDL+CQL IDQV +LD KR           
Sbjct: 100 KWSFLSWYLALLGKYPVAVKALTSSILNLIGDLICQLVIDQVPSLDFKRTFVFTFLGFAL 159

Query: 653 XGPTLHFWYLSLSKLVPAPGASGAFXXXXXXXXLFSPVFIGFFLSTLLTLEGRPSQIVPK 474
            GPTLHFWYL LSKLV  PGASGA         LFSP+FIG FLSTL+TLEG PS+ VPK
Sbjct: 160 VGPTLHFWYLYLSKLVTLPGASGALLRLVLDQFLFSPIFIGVFLSTLVTLEGNPSRAVPK 219

Query: 473 LQQEWLATVLANWQLWIPFQFLNFLFVPQKFQVLAANFIALAWNVILSFKAHKAILPK 300
           L+QEW + VLANW+LWIPFQFLNF FVPQ+FQVLAAN IAL WNVILSF AHK +LPK
Sbjct: 220 LKQEWFSAVLANWKLWIPFQFLNFRFVPQQFQVLAANVIALVWNVILSFMAHKEVLPK 277


>gb|EEE52695.1| hypothetical protein OsJ_35092 [Oryza sativa Japonica Group]
          Length = 268

 Score =  235 bits (600), Expect = 1e-59
 Identities = 115/175 (65%), Positives = 136/175 (77%)
 Frame = -3

Query: 824 LLSWYLAALEKYPVLTKALTSAILTFIGDLVCQLAIDQVSTLDVKRXXXXXXXXXXXXGP 645
           LL+WYL AL+K+P+ TKA+TSA+LT  GDL+CQLAID+V  LD+KR            GP
Sbjct: 94  LLAWYLLALDKHPITTKAVTSAVLTLTGDLICQLAIDKVPKLDLKRTFVFTFLGLVLVGP 153

Query: 644 TLHFWYLSLSKLVPAPGASGAFXXXXXXXXLFSPVFIGFFLSTLLTLEGRPSQIVPKLQQ 465
           TLH WYL LSKLV   GASGA         +FSP+FIG F+S L+TLEG+PS +VPKL+Q
Sbjct: 154 TLHVWYLYLSKLVMINGASGAIARLLLDQFIFSPIFIGVFMSLLVTLEGKPSLVVPKLKQ 213

Query: 464 EWLATVLANWQLWIPFQFLNFLFVPQKFQVLAANFIALAWNVILSFKAHKAILPK 300
           EWL++V+ANWQLWIPFQFLNF FVPQKFQVLAANF+ALAWNVILSFKAHK +  K
Sbjct: 214 EWLSSVIANWQLWIPFQFLNFYFVPQKFQVLAANFVALAWNVILSFKAHKEVTVK 268


Top