BLASTX nr result

ID: Cimicifuga21_contig00005199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005199
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328955.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-07
ref|XP_002535252.1| conserved hypothetical protein [Ricinus comm...    57   4e-06

>ref|XP_002328955.1| predicted protein [Populus trichocarpa] gi|222839189|gb|EEE77540.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
 Frame = +1

Query: 157 SPASTARPLNQFHSHNFMATEPGL------NIVLREESNGAVAHALPCDLQSVTNTMAEV 318
           S +S+ARPL      +  ATE  L      ++ +         H LPC ++    +    
Sbjct: 24  STSSSARPLYTTLLQSLTATESALPMENMDDVYVNPAMEKDSKHVLPCHMEIGEGSNI-- 81

Query: 319 QQPEKLYGKYGPMVFNLLPKGVVPPSGPSRGTNEIEN 429
            +  +L GK+GPM+ N+LPKG +PPSGPS+G N + +
Sbjct: 82  -RSTRLAGKFGPMILNVLPKGTIPPSGPSKGGNSLND 117


>ref|XP_002535252.1| conserved hypothetical protein [Ricinus communis]
           gi|223523639|gb|EEF27131.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
 Frame = +1

Query: 163 ASTARPLNQFHSHNFMATEPGLNIVLREESNGAVAHA--------LPCDLQSVTNTMAEV 318
           A+ AR LN+  S    ATEP LN+ L  +  G    +        LPC++          
Sbjct: 31  AAAARLLNRDFS--LAATEPVLNLALPTDKVGFDVSSVKDSKNGRLPCEVMDSNRNSNVN 88

Query: 319 QQPEKLYGKYGPMVF-NLLPKGVVPPSGPSRGTNEIEN 429
           + P +L G+Y P  F + LPKG VP SGPS+GTN++ N
Sbjct: 89  KIPVRLIGRYAPSTFLSRLPKGSVPGSGPSKGTNDVNN 126


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