BLASTX nr result

ID: Cimicifuga21_contig00005118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005118
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632757.1| PREDICTED: auxin-repressed 12.5 kDa protein-...    98   3e-18
ref|XP_002304241.1| predicted protein [Populus trichocarpa] gi|2...    84   4e-14
ref|NP_001150341.1| LOC100283971 [Zea mays] gi|195638550|gb|ACG3...    77   7e-12
ref|XP_003574579.1| PREDICTED: auxin-repressed 12.5 kDa protein-...    74   3e-11
ref|XP_003528661.1| PREDICTED: uncharacterized protein LOC100820...    74   6e-11

>ref|XP_003632757.1| PREDICTED: auxin-repressed 12.5 kDa protein-like [Vitis vinifera]
           gi|297742955|emb|CBI35822.3| unnamed protein product
           [Vitis vinifera]
          Length = 126

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 58/131 (44%), Positives = 68/131 (51%)
 Frame = -1

Query: 791 MGLLDNLWDDTMAGPRPDKGFGKLRKYDSLPVNQIMXXXXXXXXXXXXXXXISRSITIVK 612
           MG LD LWD+T+AGP P+ G GKLRKY SL   +                 ++RSITI+K
Sbjct: 1   MGFLDKLWDETVAGPPPETGLGKLRKYKSLSAAR------SPPIINPDEVQVTRSITILK 54

Query: 611 PNSDIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDMKRLSRRKSMSEAFERAEPRSPT 432
            NS  RN                             D K  +RRK+  EAFERAEPRSPT
Sbjct: 55  TNSSFRNFSPDSVSVPNSPAGSSAPESPFTPGTPTGDYKTDARRKAALEAFERAEPRSPT 114

Query: 431 VYDWVVISALD 399
           VYDW+VISALD
Sbjct: 115 VYDWIVISALD 125


>ref|XP_002304241.1| predicted protein [Populus trichocarpa] gi|222841673|gb|EEE79220.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 84.0 bits (206), Expect = 4e-14
 Identities = 54/136 (39%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
 Frame = -1

Query: 791 MGLLDNLWDDTMAGPRPDKGFGKLRKYDSLPVNQIMXXXXXXXXXXXXXXXISRSITIVK 612
           MG L  LWD+T+AGP PD G GKLRKYDS  V                   I+RSITIV+
Sbjct: 1   MGFLHKLWDETLAGPMPDSGLGKLRKYDSFSVRS-SPPVDAAAANSIEDMNITRSITIVR 59

Query: 611 PNSD--IRNXXXXXXXXXXXXXXXXXXXXXXXXXXXRL---DMKRLSRRKSMSEAFERAE 447
            NS   +RN                                D +R+  RKS  EA E  E
Sbjct: 60  TNSSKYLRNISVDPCSSPVSPATPSTPTTPLTPGITGTPRGDFRRIKARKSSDEALESGE 119

Query: 446 PRSPTVYDWVVISALD 399
           PRS T+YDW+VI+ALD
Sbjct: 120 PRSLTIYDWIVINALD 135


>ref|NP_001150341.1| LOC100283971 [Zea mays] gi|195638550|gb|ACG38743.1| auxin-repressed
           protein [Zea mays]
          Length = 132

 Score = 76.6 bits (187), Expect = 7e-12
 Identities = 50/132 (37%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
 Frame = -1

Query: 791 MGLLDNLWDDTMAGPRPDKGFGKLRKYDSLPVNQIMXXXXXXXXXXXXXXXISRSITIVK 612
           MGLLD LWD+T+AGPRPD G GKLRKY S   +                  ++RSITI +
Sbjct: 1   MGLLDQLWDETVAGPRPDSGLGKLRKYSSFSPSSSSSSSSILAPAPAPAPAVTRSITIAR 60

Query: 611 PNSDIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDMKRLSRRKSMSEAFERA-EPRSP 435
           P S +                                 +R  R+  +S+  E A  PRSP
Sbjct: 61  PPS-LSVESYSSSSVPSSPASTPDSPLAAATPPKADGWRRFRRKTKVSDGPEPAVGPRSP 119

Query: 434 TVYDWVVISALD 399
           TVYDWVVIS+LD
Sbjct: 120 TVYDWVVISSLD 131


>ref|XP_003574579.1| PREDICTED: auxin-repressed 12.5 kDa protein-like [Brachypodium
           distachyon]
          Length = 131

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 50/135 (37%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
 Frame = -1

Query: 791 MGLLDNLWDDTMAGPRPDKGFGKLRKYDSLPVNQIMXXXXXXXXXXXXXXXISRSITIVK 612
           MGLLD LWD+T+AGPRPD G GKLRKY S   +                  ++RSITI +
Sbjct: 1   MGLLDQLWDETVAGPRPDHGLGKLRKYSSFSPSS-----SSSTAVAAAAPAVTRSITIAR 55

Query: 611 PNSDIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDMKRLSRRKSMSEAFERAE----P 444
           P S                                   + L R+  M++    AE    P
Sbjct: 56  PPSLAVPSGESSSVPSSPASVPDSPFAAAATTPRGEGWRALRRKSKMADVVVGAEAAVGP 115

Query: 443 RSPTVYDWVVISALD 399
           RSPTVYDWVVIS+LD
Sbjct: 116 RSPTVYDWVVISSLD 130


>ref|XP_003528661.1| PREDICTED: uncharacterized protein LOC100820058 isoform 2 [Glycine
           max]
          Length = 122

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 50/131 (38%), Positives = 61/131 (46%)
 Frame = -1

Query: 791 MGLLDNLWDDTMAGPRPDKGFGKLRKYDSLPVNQIMXXXXXXXXXXXXXXXISRSITIVK 612
           MG L  LWD+T+AGP P+ G GKLRKY+S      +               ISRSITIV+
Sbjct: 3   MGFLHKLWDETLAGPAPETGLGKLRKYNSFSGGSSV------RSTVAEHVPISRSITIVR 56

Query: 611 PNSDIRNXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDMKRLSRRKSMSEAFERAEPRSPT 432
             S                                 D K+L+RRK  S   E AE RSPT
Sbjct: 57  SQSGFGTTTTTSAPSAPTTPRTPLTPEAPGG-----DFKKLTRRK--SSTVESAENRSPT 109

Query: 431 VYDWVVISALD 399
           +YDWV++SALD
Sbjct: 110 IYDWVIMSALD 120


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