BLASTX nr result

ID: Cimicifuga21_contig00005099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005099
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272652.1| PREDICTED: uncharacterized protein LOC100246...    68   1e-09
ref|XP_003627312.1| Lipoxygenase [Medicago truncatula] gi|355521...    65   1e-08
ref|XP_002534567.1| conserved hypothetical protein [Ricinus comm...    65   1e-08
gb|AFK40652.1| unknown [Medicago truncatula]                           63   3e-08
ref|XP_002304128.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002272652.1| PREDICTED: uncharacterized protein LOC100246433 [Vitis vinifera]
          Length = 132

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/57 (61%), Positives = 41/57 (71%)
 Frame = +3

Query: 219 QYTCVLKKLKCYYYSVVKDLIEAGSALETLQQRILMETYFTVPVMGVSVAGVHSYMG 389
           +Y   LKKLK YY S+VKD +EAG+ LET QQRILMET F VPV+GVS +   S  G
Sbjct: 68  RYFFTLKKLKQYYRSMVKDFVEAGATLETFQQRILMETSFAVPVLGVSFSTYPSAAG 124


>ref|XP_003627312.1| Lipoxygenase [Medicago truncatula] gi|355521334|gb|AET01788.1|
           Lipoxygenase [Medicago truncatula]
          Length = 595

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
 Frame = +3

Query: 105 NLIRRRKVQSIRLXXXXXXXXFIXXXXXXXXXXXXXXX--QYTCVLKKLKCYYYSVVKDL 278
           +L RRRKVQ++RL         I                 QY  +LK+LK +Y +VVKDL
Sbjct: 25  SLFRRRKVQTVRLGSKKPRRRIIGGIVRMFKRMRVKWLKLQYLRLLKRLKEHYRNVVKDL 84

Query: 279 IEAGSALETLQQRILMETYFTVPVMGVSVAGVHSYMGS 392
           IEAG+ +ET QQR+ ME+ F VP +GV+++   S  GS
Sbjct: 85  IEAGATIETFQQRLFMESTFAVP-LGVNLSTYPSRFGS 121


>ref|XP_002534567.1| conserved hypothetical protein [Ricinus communis]
           gi|223525015|gb|EEF27816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
 Frame = +3

Query: 24  MALADNN--MIHNENLIRSPQKSSFLLRPNLIRRRKVQSIRLXXXXXXXXFIXXXXXXXX 197
           MALAD      H     R P +    LR     RRK+ ++RL                  
Sbjct: 1   MALADETPCQTHLTTTFRWPTRRKIWLR-----RRKLPTLRLGGKKPRRGSFLIRVLRKV 55

Query: 198 XXXXXXXQYTCVLKKLKCYYYSVVKDLIEAGSALETLQQRILMETYFTVPVMG 356
                  QY+C+L+KLK YY +++KD++EAG+ +E  QQR++ME    VPV+G
Sbjct: 56  RLKWLKLQYSCMLRKLKEYYRNLIKDVVEAGATIEVYQQRLVMEASLAVPVLG 108


>gb|AFK40652.1| unknown [Medicago truncatula]
          Length = 129

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
 Frame = +3

Query: 105 NLIRRRKVQSIRLXXXXXXXXFIXXXXXXXXXXXXXXX--QYTCVLKKLKCYYYSVVKDL 278
           +L RRRKVQ+ RL         I                 QY  +LK+LK +Y +VVKDL
Sbjct: 25  SLFRRRKVQTARLGSKKPRRRIIGGIVRMFKRMRVKWLKLQYLRLLKRLKEHYRNVVKDL 84

Query: 279 IEAGSALETLQQRILMETYFTVPVMGVSVAGVHSYMGS 392
           IEAG+ +ET QQR+ ME+ F VP +GV+++   S  GS
Sbjct: 85  IEAGATIETFQQRLFMESTFAVP-LGVNLSTYPSRFGS 121


>ref|XP_002304128.1| predicted protein [Populus trichocarpa] gi|222841560|gb|EEE79107.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/121 (33%), Positives = 58/121 (47%)
 Frame = +3

Query: 30  LADNNMIHNENLIRSPQKSSFLLRPNLIRRRKVQSIRLXXXXXXXXFIXXXXXXXXXXXX 209
           +A +N I  +N   +      L R   IR RK+  IRL                      
Sbjct: 1   MAQDNDIPLKNTSLTTASRWPLRRRLSIRGRKLPIIRLGGEKPRRRMFLVRMLRRMRLRW 60

Query: 210 XXXQYTCVLKKLKCYYYSVVKDLIEAGSALETLQQRILMETYFTVPVMGVSVAGVHSYMG 389
              QY C+LKKLK Y+ +++KD+  +GS+++   QRI MET F VP MG++ +   S  G
Sbjct: 61  LKLQYLCMLKKLKEYHRNLMKDMKVSGSSIDAYNQRIFMETSFAVPGMGITFSNFLSVAG 120

Query: 390 S 392
           S
Sbjct: 121 S 121


Top