BLASTX nr result

ID: Cimicifuga21_contig00005098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005098
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534567.1| conserved hypothetical protein [Ricinus comm...    68   2e-09
ref|XP_002331197.1| predicted protein [Populus trichocarpa] gi|2...    66   8e-09
ref|XP_002272652.1| PREDICTED: uncharacterized protein LOC100246...    64   3e-08
ref|XP_002304128.1| predicted protein [Populus trichocarpa] gi|2...    61   3e-07
ref|XP_003627312.1| Lipoxygenase [Medicago truncatula] gi|355521...    57   3e-06

>ref|XP_002534567.1| conserved hypothetical protein [Ricinus communis]
           gi|223525015|gb|EEF27816.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 126

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
 Frame = -3

Query: 538 VRRRKAPSIRLXXXXXXXGFIXXXXXXXXXXXXXXLQYTCVLKKLRSYYYSVVKDLIEHR 359
           +RRRK P++RL       G                LQY+C+L+KL+ YY +++KD++E  
Sbjct: 27  LRRRKLPTLRLGGKKPRRGSFLIRVLRKVRLKWLKLQYSCMLRKLKEYYRNLIKDVVEAG 86

Query: 358 ATLEALQQRIMMETSFAVPVMGI---PSYMGS 272
           AT+E  QQR++ME S AVPV+G    PS  GS
Sbjct: 87  ATIEVYQQRLVMEASLAVPVLGFNFYPSVPGS 118


>ref|XP_002331197.1| predicted protein [Populus trichocarpa] gi|222873318|gb|EEF10449.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
 Frame = -3

Query: 619 DNHTIHHENSRSITRSQKSSFLQRTNLVRRRKAPSIRLXXXXXXXGFIXXXXXXXXXXXX 440
           D+H I   N+   T S+    L+R   +RRRK P IRL         +            
Sbjct: 4   DHHRIPPRNTDLATTSRWP--LRRRLSLRRRKLPIIRLGGEKPRRRRMSLLRMLRGTRLR 61

Query: 439 XXL-QYTCVLKKLRSYYYSVVKDLIEHRATLEALQQRIMMETSFAVPVMGI--PSYMGSQ 269
               +Y C+LKKL+  Y + + DL    AT+EA QQR++METSFAVP MGI   +++  Q
Sbjct: 62  WLKLRYLCMLKKLKECYRNFINDLSASGATIEAYQQRLLMETSFAVPGMGITFSNFLSVQ 121

Query: 268 SRSNQAR 248
           + SN +R
Sbjct: 122 AGSNPSR 128


>ref|XP_002272652.1| PREDICTED: uncharacterized protein LOC100246433 [Vitis vinifera]
          Length = 132

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = -3

Query: 430 QYTCVLKKLRSYYYSVVKDLIEHRATLEALQQRIMMETSFAVPVMGI 290
           +Y   LKKL+ YY S+VKD +E  ATLE  QQRI+METSFAVPV+G+
Sbjct: 68  RYFFTLKKLKQYYRSMVKDFVEAGATLETFQQRILMETSFAVPVLGV 114


>ref|XP_002304128.1| predicted protein [Populus trichocarpa] gi|222841560|gb|EEE79107.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
 Frame = -3

Query: 556 LQRTNLVRRRKAPSIRLXXXXXXXGFIXXXXXXXXXXXXXXLQYTCVLKKLRSYYYSVVK 377
           L+R   +R RK P IRL                        LQY C+LKKL+ Y+ +++K
Sbjct: 22  LRRRLSIRGRKLPIIRLGGEKPRRRMFLVRMLRRMRLRWLKLQYLCMLKKLKEYHRNLMK 81

Query: 376 DLIEHRATLEALQQRIMMETSFAVPVMGIP-SYMGSQSRSNQAR 248
           D+    ++++A  QRI METSFAVP MGI  S   S + SN +R
Sbjct: 82  DMKVSGSSIDAYNQRIFMETSFAVPGMGITFSNFLSVAGSNPSR 125


>ref|XP_003627312.1| Lipoxygenase [Medicago truncatula] gi|355521334|gb|AET01788.1|
           Lipoxygenase [Medicago truncatula]
          Length = 595

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
 Frame = -3

Query: 553 QRTNLVRRRKAPSIRLXXXXXXXGFIXXXXXXXXXXXXXXL--QYTCVLKKLRSYYYSVV 380
           ++ +L RRRK  ++RL         I              L  QY  +LK+L+ +Y +VV
Sbjct: 22  RKVSLFRRRKVQTVRLGSKKPRRRIIGGIVRMFKRMRVKWLKLQYLRLLKRLKEHYRNVV 81

Query: 379 KDLIEHRATLEALQQRIMMETSFAVPVMGI-----PSYMGS 272
           KDLIE  AT+E  QQR+ ME++FAVP +G+     PS  GS
Sbjct: 82  KDLIEAGATIETFQQRLFMESTFAVP-LGVNLSTYPSRFGS 121


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