BLASTX nr result

ID: Cimicifuga21_contig00005044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005044
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37215.3| unnamed protein product [Vitis vinifera]              175   3e-42
ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [...   175   3e-42
emb|CAN70732.1| hypothetical protein VITISV_040379 [Vitis vinifera]   175   3e-42
ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communi...   161   4e-38
ref|XP_002321301.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38

>emb|CBI37215.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score =  175 bits (444), Expect = 3e-42
 Identities = 77/92 (83%), Positives = 84/92 (91%)
 Frame = -3

Query: 278 SHQNPVSFVSWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGEKSPIVSSCAWLPDSKRL 99
           SHQNPVSFV+WSPDDTMLLTCGNGEVLKLWDVETGTCKHTFG+   IVSSCAW PDSKR+
Sbjct: 205 SHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGDHGFIVSSCAWFPDSKRI 264

Query: 98  VCGSSDPNKCIYMWDLDGNELEAWRGGRIPKV 3
           VCGSSDP K IYMWD DGNE++AW+G R+PKV
Sbjct: 265 VCGSSDPEKGIYMWDCDGNEIKAWKGMRMPKV 296


>ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [Vitis vinifera]
          Length = 520

 Score =  175 bits (444), Expect = 3e-42
 Identities = 77/92 (83%), Positives = 84/92 (91%)
 Frame = -3

Query: 278 SHQNPVSFVSWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGEKSPIVSSCAWLPDSKRL 99
           SHQNPVSFV+WSPDDTMLLTCGNGEVLKLWDVETGTCKHTFG+   IVSSCAW PDSKR+
Sbjct: 265 SHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGDHGFIVSSCAWFPDSKRI 324

Query: 98  VCGSSDPNKCIYMWDLDGNELEAWRGGRIPKV 3
           VCGSSDP K IYMWD DGNE++AW+G R+PKV
Sbjct: 325 VCGSSDPEKGIYMWDCDGNEIKAWKGMRMPKV 356


>emb|CAN70732.1| hypothetical protein VITISV_040379 [Vitis vinifera]
          Length = 362

 Score =  175 bits (444), Expect = 3e-42
 Identities = 77/92 (83%), Positives = 84/92 (91%)
 Frame = -3

Query: 278 SHQNPVSFVSWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGEKSPIVSSCAWLPDSKRL 99
           SHQNPVSFV+WSPDDTMLLTCGNGEVLKLWDVETGTCKHTFG+   IVSSCAW PDSKR+
Sbjct: 129 SHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGDHGFIVSSCAWFPDSKRI 188

Query: 98  VCGSSDPNKCIYMWDLDGNELEAWRGGRIPKV 3
           VCGSSDP K IYMWD DGNE++AW+G R+PKV
Sbjct: 189 VCGSSDPEKGIYMWDCDGNEIKAWKGMRMPKV 220


>ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communis]
           gi|223526484|gb|EEF28755.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 523

 Score =  161 bits (408), Expect = 4e-38
 Identities = 73/92 (79%), Positives = 78/92 (84%)
 Frame = -3

Query: 278 SHQNPVSFVSWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGEKSPIVSSCAWLPDSKRL 99
           SHQ PVSFV+WSPDDT LLTCGN EVLKLWDVETGTCKHTFG+   IVSSCAW PDSKR 
Sbjct: 265 SHQKPVSFVAWSPDDTKLLTCGNLEVLKLWDVETGTCKHTFGDHGFIVSSCAWFPDSKRF 324

Query: 98  VCGSSDPNKCIYMWDLDGNELEAWRGGRIPKV 3
           VCGSSDP K I MWD  GNE++AWRG R+PKV
Sbjct: 325 VCGSSDPEKGICMWDCHGNEIKAWRGTRMPKV 356


>ref|XP_002321301.1| predicted protein [Populus trichocarpa] gi|222862074|gb|EEE99616.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  161 bits (408), Expect = 4e-38
 Identities = 72/92 (78%), Positives = 78/92 (84%)
 Frame = -3

Query: 278 SHQNPVSFVSWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGEKSPIVSSCAWLPDSKRL 99
           SH  PVSFV+WSPDDT LLTCGN EVLKLWDVETGTCKHTFG+   +VSSCAW PDSKR 
Sbjct: 4   SHLTPVSFVAWSPDDTKLLTCGNVEVLKLWDVETGTCKHTFGDHGFVVSSCAWFPDSKRF 63

Query: 98  VCGSSDPNKCIYMWDLDGNELEAWRGGRIPKV 3
           VCGSSDP K I MWD DGNE++AWRG R+PKV
Sbjct: 64  VCGSSDPEKGICMWDCDGNEIKAWRGTRMPKV 95


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