BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00005013
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95931.1| unknown [Populus trichocarpa]                          122   1e-25
ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-23
ref|XP_002533124.1| polypyrimidine tract binding protein, putati...   111   2e-22
ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...   110   3e-22
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   110   3e-22

>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score =  122 bits (305), Expect = 1e-25
 Identities = 80/197 (40%), Positives = 98/197 (49%), Gaps = 7/197 (3%)
 Frame = -3

Query: 898 IYDGGYCKLHLSYSRHTDLNVKAHNDRSRDYTLPE-GVLPAQQPGPTLPGGGWQSPQSTA 722
           IYDGGYCKLHLSYSRHTDLNVKA++D+SRDYT+P+  ++ AQ PG       WQ+PQ+ +
Sbjct: 307 IYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLIAAQAPGLHTAPTMWQNPQAGS 366

Query: 721 VYPGNEY--QVGMQGQYPPEGQAGPWDPNAQAGGRSSFVSVXXXXXXXXXXXXXXXXXXX 548
           +Y GN Y     +  Q PP GQ   WDP  QAGG+  + SV                   
Sbjct: 367 MYTGNNYATTAAVPVQVPP-GQVPAWDPTMQAGGQ-GYASV------------------- 405

Query: 547 XXXXXXGQTYQHXXXXXXXXXXXXXXXXPLQPPGQAP----SGVXXXXXXNMPQYGGHQS 380
                 GQTY                     P G +P    S +          + G QS
Sbjct: 406 -PGTYPGQTYPTPPASAYATAAI--------PAGSSPRSHSSPISHSVASMAMSHPGMQS 456

Query: 379 NYRPSGAPPVGQPPHYG 329
           N RPSGA P GQPP+YG
Sbjct: 457 NLRPSGASPPGQPPYYG 473


>ref|XP_002324068.1| predicted protein [Populus trichocarpa] gi|222867070|gb|EEF04201.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  115 bits (288), Expect = 1e-23
 Identities = 78/198 (39%), Positives = 93/198 (46%), Gaps = 7/198 (3%)
 Frame = -3

Query: 898 IYDGGYCKLHLSYSRHTDLNVKAHNDRSRDYTLPE-GVLPAQQPGPTLPGGGWQSPQSTA 722
           IYDGGYCKLHLSYSRHTDLNVKA +D+SRDYT+P+   L AQ PG       WQ+PQ+ +
Sbjct: 311 IYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPDASFLTAQAPGLHTAPTTWQNPQAGS 370

Query: 721 VYPGNEY--QVGMQGQYPPEGQAGPWDPNAQAGGRSSFVSVXXXXXXXXXXXXXXXXXXX 548
           +Y G+ Y        Q PP GQ   WDP+ QAGG   + SV                   
Sbjct: 371 MYLGSNYATTAAAPAQVPP-GQVAAWDPSMQAGG-PGYSSV------------------- 409

Query: 547 XXXXXXGQTYQHXXXXXXXXXXXXXXXXPLQPPGQAPSGVXXXXXXNMPQYG----GHQS 380
                 GQTY                     PPG +P          +   G    G Q 
Sbjct: 410 -RGMYPGQTY----------PTPPAYASSALPPGSSPHSYSSPISPGVASMGMTHPGVQP 458

Query: 379 NYRPSGAPPVGQPPHYGQ 326
           N RP GA P GQ P+YG+
Sbjct: 459 NMRPGGASPPGQTPYYGR 476


>ref|XP_002533124.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223527087|gb|EEF29269.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  111 bits (278), Expect = 2e-22
 Identities = 78/196 (39%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
 Frame = -3

Query: 898 IYDGGYCKLHLSYSRHTDLNVKAHNDRSRDYTLPEGVLPA--QQPG-PTLPGGGWQSPQS 728
           IYDGGYCKLHLSYSRHTDLNVKA++D+SRDYT+P+  L A  Q PG PT P   WQ+PQ+
Sbjct: 315 IYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAAGQVPGVPTAP-TMWQNPQA 373

Query: 727 TAVYPGNEY-QVGMQGQYPPEGQAGPWDPNAQAGGRSSFVSVXXXXXXXXXXXXXXXXXX 551
           + +YP N Y          P GQ   W+P+ +AGG  ++ SV                  
Sbjct: 374 SPMYPVNSYASAAAVTAQVPAGQVPAWNPSMEAGG-PAYPSV------------------ 414

Query: 550 XXXXXXXGQTYQHXXXXXXXXXXXXXXXXPLQPPGQAPSGVXXXXXXNMPQ-YGGHQSNY 374
                  GQ+Y                    Q    +P          MP  + G QSN 
Sbjct: 415 -PPGTFPGQSYPAPPPTYVSAAMPVGSSPLTQGSPMSPG------VGTMPMTHPGVQSNL 467

Query: 373 RPSGAPPVGQPPHYGQ 326
           RP GA P GQPP YG+
Sbjct: 468 RPGGASPPGQPPFYGR 483


>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score =  110 bits (276), Expect = 3e-22
 Identities = 73/193 (37%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
 Frame = -3

Query: 898 IYDGGYCKLHLSYSRHTDLNVKAHNDRSRDYTLPEGVLPAQQPGPTLPGGG--WQSPQST 725
           IYDGGYCKLHLSYSRHTDLNVKAH+DRSRDYT+P+  L A Q  P  PG    WQ+PQ+ 
Sbjct: 278 IYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAA 337

Query: 724 AVYPGNEYQVGMQGQYPPEGQAGPWDPNAQAGGRSSFVSVXXXXXXXXXXXXXXXXXXXX 545
            +Y G++       Q P       WDPN QA GRS+F S                     
Sbjct: 338 PLYTGHDAAAAAAVQVP------SWDPNMQA-GRSTFASAASAFPSQPFASSSISAYP-- 388

Query: 544 XXXXXGQTYQHXXXXXXXXXXXXXXXXPLQPPGQAPSGVXXXXXXNMPQYGGHQSNYRPS 365
                                         PPG +P          +P       N RP 
Sbjct: 389 -----------------------------APPGSSP------LTPAVP------PNVRPG 407

Query: 364 GAPPVGQPPHYGQ 326
           GA P G+PP++GQ
Sbjct: 408 GASPPGRPPYFGQ 420


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score =  110 bits (276), Expect = 3e-22
 Identities = 73/193 (37%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
 Frame = -3

Query: 898 IYDGGYCKLHLSYSRHTDLNVKAHNDRSRDYTLPEGVLPAQQPGPTLPGGG--WQSPQST 725
           IYDGGYCKLHLSYSRHTDLNVKAH+DRSRDYT+P+  L A Q  P  PG    WQ+PQ+ 
Sbjct: 307 IYDGGYCKLHLSYSRHTDLNVKAHSDRSRDYTIPDSGLLAVQQAPGHPGATTVWQNPQAA 366

Query: 724 AVYPGNEYQVGMQGQYPPEGQAGPWDPNAQAGGRSSFVSVXXXXXXXXXXXXXXXXXXXX 545
            +Y G++       Q P       WDPN QA GRS+F S                     
Sbjct: 367 PLYTGHDAAAAAAVQVP------SWDPNMQA-GRSTFASAASAFPSQPFASSSISAYP-- 417

Query: 544 XXXXXGQTYQHXXXXXXXXXXXXXXXXPLQPPGQAPSGVXXXXXXNMPQYGGHQSNYRPS 365
                                         PPG +P          +P       N RP 
Sbjct: 418 -----------------------------APPGSSP------LTPAVP------PNVRPG 436

Query: 364 GAPPVGQPPHYGQ 326
           GA P G+PP++GQ
Sbjct: 437 GASPPGRPPYFGQ 449