BLASTX nr result

ID: Cimicifuga21_contig00004385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004385
         (1584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis ...   531   e-148
ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [C...   520   e-145
ref|XP_002882787.1| LEM3 (ligand-effect modulator 3) family prot...   520   e-145
ref|XP_002894565.1| LEM3 (ligand-effect modulator 3) family prot...   512   e-143
ref|XP_003546828.1| PREDICTED: ALA-interacting subunit 3-like [G...   511   e-142

>ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis vinifera]
            gi|297736110|emb|CBI24148.3| unnamed protein product
            [Vitis vinifera]
          Length = 349

 Score =  531 bits (1368), Expect = e-148
 Identities = 252/333 (75%), Positives = 285/333 (85%)
 Frame = +2

Query: 353  PRRNSKRPKYSKFTQQELPACKPILTPQWVISTFMLVSFVFIPIGVVSLLASRDVVEIVD 532
            PRRNSKRPKYS+FTQQELPACKPILTP+WVIS FMLV  +FIPIGV +L ASRDVVEIVD
Sbjct: 21   PRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVGIIFIPIGVAALFASRDVVEIVD 80

Query: 533  RYETVCIPPASQSSKDEKVKYIQTPGDKTCTRNLTVPKRMKHPIYVYYQLDNFYQNHRRY 712
            RYET CIP   +  +++KV YIQ PG+K C R LTVPK+MK PIYVYYQLDNFYQNHRRY
Sbjct: 81   RYETDCIP---EEFRNDKVNYIQKPGNKPCNRTLTVPKKMKQPIYVYYQLDNFYQNHRRY 137

Query: 713  VKSRSDAQLNDRSKENDTSSCDPQDKSGNLTIVPCGLIAWSLFNDTYSLSRNNQPLDVNK 892
            VKSR+D QL   +  N+TS C P+D +    IVPCGLIAWSLFNDTY+ SRNN+ L +NK
Sbjct: 138  VKSRNDEQLRSGNSANETSDCKPEDYANGAVIVPCGLIAWSLFNDTYNFSRNNEQLSLNK 197

Query: 893  KGISWKSDRDSKFGDDVFPKNFQNNETMVGGKRLDPNVSLSQQEDLIVWMRTAALPTFRK 1072
            KGISWKSDR+ KFG DV+PKNFQN  T++GG  L+ ++ LS+QEDLIVWMRTAALPTFRK
Sbjct: 198  KGISWKSDREHKFGKDVYPKNFQNG-TLIGGATLNESIPLSEQEDLIVWMRTAALPTFRK 256

Query: 1073 LYGKIEVDLEANDQIVVTLQNNYNTYSFGGKKKLVLSTTSWLGGKNDFLGIAYLTIGGLC 1252
            LYGKIEVDL+ ND I V+L+NNYNTYSF GKKKLVLSTTSWLGGKNDFLGIAYLT+GG+C
Sbjct: 257  LYGKIEVDLQINDTIQVSLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGIC 316

Query: 1253 FSLAMAFTVVYLVKPRKLGDPSYLSWNKNPSGH 1351
              LAMAFTVVYLVKPR+LGDPSYLSWN+NP GH
Sbjct: 317  IFLAMAFTVVYLVKPRRLGDPSYLSWNRNPGGH 349


>ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [Cucumis sativus]
            gi|449475853|ref|XP_004154570.1| PREDICTED:
            ALA-interacting subunit 3-like [Cucumis sativus]
          Length = 343

 Score =  520 bits (1338), Expect = e-145
 Identities = 252/332 (75%), Positives = 280/332 (84%)
 Frame = +2

Query: 356  RRNSKRPKYSKFTQQELPACKPILTPQWVISTFMLVSFVFIPIGVVSLLASRDVVEIVDR 535
            RRNSKRPKYS+FTQQELPACKPILTP+WVIS FMLVS +F+PIGV SL ASRDVVEI+DR
Sbjct: 16   RRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIIFVPIGVASLFASRDVVEIIDR 75

Query: 536  YETVCIPPASQSSKDEKVKYIQTPGDKTCTRNLTVPKRMKHPIYVYYQLDNFYQNHRRYV 715
            YET CIP   +S   +KV +IQ   +K C RN+TVPKRMK PIYVYYQLDNFYQNHRRYV
Sbjct: 76   YETECIPERFRS---DKVGFIQGTANKICRRNITVPKRMKQPIYVYYQLDNFYQNHRRYV 132

Query: 716  KSRSDAQLNDRSKENDTSSCDPQDKSGNLTIVPCGLIAWSLFNDTYSLSRNNQPLDVNKK 895
            +SRSD QL D   E DTSSC P+D      +VPCGLIAWSLFNDTY+ + N + + +NK 
Sbjct: 133  QSRSDKQLRDPGSERDTSSCKPEDNWNGQPVVPCGLIAWSLFNDTYNFTLNKKQVAINKV 192

Query: 896  GISWKSDRDSKFGDDVFPKNFQNNETMVGGKRLDPNVSLSQQEDLIVWMRTAALPTFRKL 1075
            GISWKSDR+ KFG +VFPKNFQ    + GGK+L+ +V LSQQEDLIVWMRTAALPTFRKL
Sbjct: 193  GISWKSDREHKFGKNVFPKNFQKGN-ITGGKKLNESVPLSQQEDLIVWMRTAALPTFRKL 251

Query: 1076 YGKIEVDLEANDQIVVTLQNNYNTYSFGGKKKLVLSTTSWLGGKNDFLGIAYLTIGGLCF 1255
            YGKIEVDLE ND I V L+NNYNTYSF GKKKLVLSTTSWLGGKNDFLGIAYLT+GGLCF
Sbjct: 252  YGKIEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCF 311

Query: 1256 SLAMAFTVVYLVKPRKLGDPSYLSWNKNPSGH 1351
             LAMAFTVVYLVKPR+LGDPSYLSWN+NPSGH
Sbjct: 312  FLAMAFTVVYLVKPRRLGDPSYLSWNRNPSGH 343


>ref|XP_002882787.1| LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297328627|gb|EFH59046.1| LEM3
            (ligand-effect modulator 3) family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 351

 Score =  520 bits (1338), Expect = e-145
 Identities = 250/331 (75%), Positives = 280/331 (84%)
 Frame = +2

Query: 356  RRNSKRPKYSKFTQQELPACKPILTPQWVISTFMLVSFVFIPIGVVSLLASRDVVEIVDR 535
            RRNSKRPKYSKFTQQELPACKPILTP WVISTF+++S +FIP+GV+SL AS+DVVEIVDR
Sbjct: 24   RRNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDR 83

Query: 536  YETVCIPPASQSSKDEKVKYIQTPGDKTCTRNLTVPKRMKHPIYVYYQLDNFYQNHRRYV 715
            Y++ C+PP  Q++K   V YIQ   +K+CTR L VPKRMK PIYVYYQL+NFYQNHRRYV
Sbjct: 84   YDSACVPPPDQANK---VAYIQGAANKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYV 140

Query: 716  KSRSDAQLNDRSKENDTSSCDPQDKSGNLTIVPCGLIAWSLFNDTYSLSRNNQPLDVNKK 895
            KSRSD+QL     EN   +C P+D  G L IVPCGLIAWSLFNDTY+LSRNNQ L VNKK
Sbjct: 141  KSRSDSQLRSVKDENQIDACKPEDDVGGLPIVPCGLIAWSLFNDTYALSRNNQRLAVNKK 200

Query: 896  GISWKSDRDSKFGDDVFPKNFQNNETMVGGKRLDPNVSLSQQEDLIVWMRTAALPTFRKL 1075
            GI+WKSDR+ KFG  VFPKNFQ    + GG  LDPN+SLS QEDLIVWMRTAALPTFRKL
Sbjct: 201  GIAWKSDREHKFGKRVFPKNFQKGN-LTGGAILDPNISLSDQEDLIVWMRTAALPTFRKL 259

Query: 1076 YGKIEVDLEANDQIVVTLQNNYNTYSFGGKKKLVLSTTSWLGGKNDFLGIAYLTIGGLCF 1255
            YGKIE DLE  D I VTLQNNYNTYSF GKKKLVLSTTSWLGGKNDFLGIAYLT+GG+CF
Sbjct: 260  YGKIESDLEKGDNIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICF 319

Query: 1256 SLAMAFTVVYLVKPRKLGDPSYLSWNKNPSG 1348
             LA+AFTV+YLVKPR+LGDP+YLSWN+ P G
Sbjct: 320  FLALAFTVMYLVKPRRLGDPTYLSWNRIPGG 350


>ref|XP_002894565.1| LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297340407|gb|EFH70824.1| LEM3
            (ligand-effect modulator 3) family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 349

 Score =  512 bits (1319), Expect = e-143
 Identities = 245/331 (74%), Positives = 279/331 (84%)
 Frame = +2

Query: 356  RRNSKRPKYSKFTQQELPACKPILTPQWVISTFMLVSFVFIPIGVVSLLASRDVVEIVDR 535
            R+NSKRPKYSKFTQQELPACKPILTP WVISTF++VS +FIP+GV+SL AS+DVVEIVDR
Sbjct: 22   RKNSKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDR 81

Query: 536  YETVCIPPASQSSKDEKVKYIQTPGDKTCTRNLTVPKRMKHPIYVYYQLDNFYQNHRRYV 715
            Y+T CIP   + ++  K+ YIQ  GDK CTR+L V KRMK P+YVYYQL+NFYQNHRRYV
Sbjct: 82   YDTECIP---EPARTNKIAYIQGDGDKVCTRDLKVTKRMKQPVYVYYQLENFYQNHRRYV 138

Query: 716  KSRSDAQLNDRSKENDTSSCDPQDKSGNLTIVPCGLIAWSLFNDTYSLSRNNQPLDVNKK 895
            KSRSD+QL     EN  S+C P+D  G   IVPCGLIAWSLFNDTY+LSRNN  L VNKK
Sbjct: 139  KSRSDSQLRSPKSENQISACKPEDDVGGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKK 198

Query: 896  GISWKSDRDSKFGDDVFPKNFQNNETMVGGKRLDPNVSLSQQEDLIVWMRTAALPTFRKL 1075
            GI+WKSD++ KFG+ VFPKNFQ    + GG  LDP + LS+QEDLIVWMRTAALPTFRKL
Sbjct: 199  GIAWKSDKEHKFGNKVFPKNFQKGN-ITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKL 257

Query: 1076 YGKIEVDLEANDQIVVTLQNNYNTYSFGGKKKLVLSTTSWLGGKNDFLGIAYLTIGGLCF 1255
            YGKIE DLE  D I VTL+NNYNTYSF GKKKLVLSTTSWLGGKNDFLGIAYLT+GG+CF
Sbjct: 258  YGKIESDLEMGDIIHVTLKNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICF 317

Query: 1256 SLAMAFTVVYLVKPRKLGDPSYLSWNKNPSG 1348
             LA+AFT++YLVKPR+LGDPSYLSWN+NP G
Sbjct: 318  FLALAFTIMYLVKPRRLGDPSYLSWNRNPGG 348


>ref|XP_003546828.1| PREDICTED: ALA-interacting subunit 3-like [Glycine max]
          Length = 344

 Score =  511 bits (1317), Expect = e-142
 Identities = 252/332 (75%), Positives = 280/332 (84%)
 Frame = +2

Query: 356  RRNSKRPKYSKFTQQELPACKPILTPQWVISTFMLVSFVFIPIGVVSLLASRDVVEIVDR 535
            RRN+KRPKYSKFTQQELPACKPILTP+ VIS F+LVS VF+PIGV SL+ASR VVEIV R
Sbjct: 18   RRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSIVFVPIGVASLIASRKVVEIVFR 77

Query: 536  YETVCIPPASQSSKDEKVKYIQTPGDKTCTRNLTVPKRMKHPIYVYYQLDNFYQNHRRYV 715
            YE+ CIP        +KV YIQ+P DKTC  +L V K MK PIYVYYQLDNFYQNHRRYV
Sbjct: 78   YESTCIP----HEVTDKVAYIQSPADKTCKISLPVDKHMKSPIYVYYQLDNFYQNHRRYV 133

Query: 716  KSRSDAQLNDRSKENDTSSCDPQDKSGNLTIVPCGLIAWSLFNDTYSLSRNNQPLDVNKK 895
            KSRSD QL DR +EN TS+C+P+D +    IVPCGLIAWSLFNDTYS SR+N+ L VNK 
Sbjct: 134  KSRSDEQLRDRREENSTSACNPEDIANGKAIVPCGLIAWSLFNDTYSFSRDNKNLTVNKN 193

Query: 896  GISWKSDRDSKFGDDVFPKNFQNNETMVGGKRLDPNVSLSQQEDLIVWMRTAALPTFRKL 1075
            GISWKSDR+ KFG DVFPKNFQ++  + GG  L+ ++ LS+QEDLIVWMRTAALPTFRKL
Sbjct: 194  GISWKSDREHKFGKDVFPKNFQSS-AIRGGASLNESIPLSKQEDLIVWMRTAALPTFRKL 252

Query: 1076 YGKIEVDLEANDQIVVTLQNNYNTYSFGGKKKLVLSTTSWLGGKNDFLGIAYLTIGGLCF 1255
            YGKIEVDL A DQI VTLQNNYNTYSF GKKKLVLSTTSWLGGKNDFLGIAYLT+GGLCF
Sbjct: 253  YGKIEVDLNAGDQINVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCF 312

Query: 1256 SLAMAFTVVYLVKPRKLGDPSYLSWNKNPSGH 1351
             LA+AFTVVY VKPR+LGDPSYLSWN+NP GH
Sbjct: 313  FLALAFTVVYFVKPRQLGDPSYLSWNRNPGGH 344


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