BLASTX nr result

ID: Cimicifuga21_contig00004368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00004368
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532424.1| PREDICTED: uncharacterized protein LOC100819...    74   2e-11
ref|XP_002509869.1| conserved hypothetical protein [Ricinus comm...    73   6e-11
ref|XP_003525371.1| PREDICTED: uncharacterized protein LOC100782...    68   2e-09
ref|XP_002303613.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-07
ref|XP_004146572.1| PREDICTED: uncharacterized protein LOC101222...    58   2e-06

>ref|XP_003532424.1| PREDICTED: uncharacterized protein LOC100819206 [Glycine max]
          Length = 660

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
 Frame = +1

Query: 1   RLLAAAQTLYEIARHSPAENLSSGKLRWPKRPSQKAMKARKPRSTGKTEGLLSIPRFEVG 180
           R+L AAQTL EIA HS  +N S G LRW ++ SQK MKA   +S  K E   S P   +G
Sbjct: 494 RVLTAAQTLCEIATHSQRQN-SDGILRWQRKTSQKTMKACHYKSNEKLEETSSRPISMIG 552

Query: 181 PCDQVENMDTSFPSKRPKHSI-----NSHTNHVGKGPMKWXXXXXXXXXXXXXEN---VE 336
                 +++   PSK+P+ SI     + ++N   KG + W                  VE
Sbjct: 553 SDMVARSVEQIMPSKKPRLSIVENKNSGYSNIAKKGHIVWPISKSSRSFPSKQVRDSFVE 612

Query: 337 AKQANTDSVRLG-MMSSFKRSLDKVCD--NELRKAVSMDWGRGRSKNE 471
            K+ N   ++   MM    R LDK  D   ++ K V MDW RGR   +
Sbjct: 613 NKRTNASILKQHCMMPPPARGLDKTRDGQQQVGKLVVMDWKRGRDNTD 660


>ref|XP_002509869.1| conserved hypothetical protein [Ricinus communis]
           gi|223549768|gb|EEF51256.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 632

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 48/103 (46%), Positives = 61/103 (59%), Gaps = 8/103 (7%)
 Frame = +1

Query: 1   RLLAAAQTLYEIARHSPAENLSSGKLRWPKRPSQKAMKARKPRSTGKTEGLLSIPRFEVG 180
           RLLAAAQTLY+IA  +   N   G ++WPK+PSQK MKARK +S  K E + + P   V 
Sbjct: 471 RLLAAAQTLYDIATSTSRLN-QDGMVKWPKKPSQKVMKARKSKSAEKPEDIFA-PSTLVM 528

Query: 181 PCDQVE--NMDTSFPSKRPKHS------INSHTNHVGKGPMKW 285
             DQ+E  ++D +  SKR K S        SH N V KGP+ W
Sbjct: 529 GSDQMEKNSVDHTLTSKRLKLSTIENKNYLSHVNGVRKGPINW 571


>ref|XP_003525371.1| PREDICTED: uncharacterized protein LOC100782637 [Glycine max]
          Length = 659

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
 Frame = +1

Query: 4   LLAAAQTLYEIARHSPAENLSSGKLRWPKRPSQKAMKARKPRSTGKTEGLLSIPRFEVGP 183
           +L AAQTL EIA H   ++ S G L+W ++ S KAMK+   +S  K E   S P   +G 
Sbjct: 494 ILTAAQTLCEIATHLMRQS-SDGILKWQRKTSLKAMKSCHYKSDEKLEETSSRPISMIGS 552

Query: 184 CDQVENMDTSFPSKRPKHSI-----NSHTNHVGKGPMKW---XXXXXXXXXXXXXENVEA 339
                +++   PSK+P+ SI     + H+N   KG + W                  VE 
Sbjct: 553 DMVARSVEQIMPSKKPRLSIVENKNSGHSNIAKKGHIVWPISKSSRSFPSKQIRDSFVEN 612

Query: 340 KQANTDSVRLG-MMSSFKRSLDKVCD--NELRKAVSMDWGRGRSKNE 471
           K+ N   ++   MM    R LDK  D   ++ K V+MDW RGR   +
Sbjct: 613 KRTNASILKQHYMMPPPARDLDKAHDGQKQVGKVVAMDWKRGRDNTD 659


>ref|XP_002303613.1| predicted protein [Populus trichocarpa] gi|222841045|gb|EEE78592.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
 Frame = +1

Query: 1   RLLAAAQTLYEIARHSPAENLSSGKLRWPKRPSQKAMKARKPRSTGKTEGLLSIPRFEVG 180
           RLL AAQTLY+IA H    N   G LR PK   QKAMKAR+ +S  K + + +     +G
Sbjct: 198 RLLEAAQTLYDIATHVARLN-QDGILRRPKELLQKAMKARRTKSIEKPDDVSAASTSSMG 256

Query: 181 PCDQVEN-MDTSFPSKRPKHSI------NSHTNHVGKGPMKW 285
              +  + MD   P+KRPK S         H + V KGP+ W
Sbjct: 257 SDHKWRSGMDQIKPTKRPKPSTIRDKKDLDHIDSVRKGPINW 298


>ref|XP_004146572.1| PREDICTED: uncharacterized protein LOC101222259 [Cucumis sativus]
          Length = 498

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
 Frame = +1

Query: 1   RLLAAAQTLYEIARHSPAENLSSGKLRWPKRPSQKAMKARKPRSTGKTEGLLSIP---RF 171
           R++AAAQTL +IA  +       G +RWPK+PSQK+MKARK +S  +TE L + P   R 
Sbjct: 326 RVMAAAQTLCDIATSASLRQNIDGIVRWPKKPSQKSMKARKLKSE-ETEELYTKPTIYRL 384

Query: 172 EVGPCDQVENMDTSFPSKRPK-------HSINSHTNHVGKGPMKW--XXXXXXXXXXXXX 324
                 + E   T  P K+PK          N    +  +GP+ W               
Sbjct: 385 WSNNPFKNEGHQTPHPLKKPKLGTTTENRRDNIAQTNCRRGPLNWSTPRSSRSSPSKFIK 444

Query: 325 ENV-EAKQANTDSVRLGMMSSFKRS--LDKVCDNE--LRKAVSMDWGRG 456
           ++V + KQ+   +V+   M     +  L K  D +   RK + MDW RG
Sbjct: 445 DSVSDTKQSTVGTVKQSSMMPPPATTLLCKAGDGQQKTRKLMLMDWKRG 493


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