BLASTX nr result

ID: Cimicifuga21_contig00003668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003668
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264489.1| PREDICTED: uncharacterized protein LOC100248...   173   4e-41
ref|XP_002871775.1| hypothetical protein ARALYDRAFT_488628 [Arab...   172   6e-41
dbj|BAD43977.1| unknown protein [Arabidopsis thaliana]                171   1e-40
ref|NP_568353.1| uncharacterized protein [Arabidopsis thaliana] ...   171   2e-40
gb|AAM67126.1| unknown [Arabidopsis thaliana]                         171   2e-40

>ref|XP_002264489.1| PREDICTED: uncharacterized protein LOC100248442 [Vitis vinifera]
           gi|296088754|emb|CBI38204.3| unnamed protein product
           [Vitis vinifera]
          Length = 130

 Score =  173 bits (439), Expect = 4e-41
 Identities = 83/118 (70%), Positives = 93/118 (78%)
 Frame = +3

Query: 249 SKGSMAKSMSFCCVILGFLCLTALAKSPRPITDYETREKKNTCYADIESGLWGWQCKSSM 428
           SK  +   +    V+L F     L+KS RPI+D E REKKN CYADIESGLWGWQCKSS+
Sbjct: 11  SKTLIFSFLLLLAVLLSFAPSPVLSKSRRPISDSEIREKKNECYADIESGLWGWQCKSSV 70

Query: 429 IAKENCALRCLSSVCYSLVYESDPLEEGEKDHVRSQEYKYCMYRVSMGESLDGVKGSF 602
           IAKENC L+CLS  CY LVYESDPLEEGEKD  RSQEYKYCM+R+S+GESLDGVKGSF
Sbjct: 71  IAKENCVLQCLSPPCYELVYESDPLEEGEKDFTRSQEYKYCMHRLSLGESLDGVKGSF 128


>ref|XP_002871775.1| hypothetical protein ARALYDRAFT_488628 [Arabidopsis lyrata subsp.
           lyrata] gi|297317612|gb|EFH48034.1| hypothetical protein
           ARALYDRAFT_488628 [Arabidopsis lyrata subsp. lyrata]
          Length = 120

 Score =  172 bits (437), Expect = 6e-41
 Identities = 82/117 (70%), Positives = 94/117 (80%), Gaps = 2/117 (1%)
 Frame = +3

Query: 258 SMAKSMSFCCVILGFLCLT--ALAKSPRPITDYETREKKNTCYADIESGLWGWQCKSSMI 431
           S A S   C ++L  +C      +KS RPI+D E R+KK+ CYADIESGLWGWQCKSS I
Sbjct: 4   SRALSSFVCLLLLLSICFVPCVFSKSLRPISDVEIRQKKSECYADIESGLWGWQCKSSAI 63

Query: 432 AKENCALRCLSSVCYSLVYESDPLEEGEKDHVRSQEYKYCMYRVSMGESLDGVKGSF 602
           AKENCALRCLS VCY L+YESDPLEEGEKD +RSQEYKYCMY+ S+GESLDGV+GSF
Sbjct: 64  AKENCALRCLSPVCYQLIYESDPLEEGEKDLIRSQEYKYCMYKSSLGESLDGVRGSF 120


>dbj|BAD43977.1| unknown protein [Arabidopsis thaliana]
          Length = 121

 Score =  171 bits (434), Expect = 1e-40
 Identities = 82/119 (68%), Positives = 96/119 (80%), Gaps = 4/119 (3%)
 Frame = +3

Query: 258 SMAKSMSFCCVILGFLCLT----ALAKSPRPITDYETREKKNTCYADIESGLWGWQCKSS 425
           S A+S SF C++L  L +       +KSPRPI+D E R+KK+ CY DIESGLWGWQCKSS
Sbjct: 4   SQARS-SFVCLLLLLLSMCFVPCVFSKSPRPISDVEIRQKKSVCYGDIESGLWGWQCKSS 62

Query: 426 MIAKENCALRCLSSVCYSLVYESDPLEEGEKDHVRSQEYKYCMYRVSMGESLDGVKGSF 602
            IAKENCALRCLS VCY L+YESDPLEEGEKD +RSQEYKYCMY+ S+GESL+GV+G F
Sbjct: 63  AIAKENCALRCLSPVCYQLIYESDPLEEGEKDLIRSQEYKYCMYKSSLGESLEGVRGIF 121


>ref|NP_568353.1| uncharacterized protein [Arabidopsis thaliana]
           gi|51969204|dbj|BAD43294.1| unknown protein [Arabidopsis
           thaliana] gi|51971525|dbj|BAD44427.1| unknown protein
           [Arabidopsis thaliana] gi|98961059|gb|ABF59013.1|
           At5g17610 [Arabidopsis thaliana]
           gi|332005065|gb|AED92448.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 121

 Score =  171 bits (433), Expect = 2e-40
 Identities = 82/119 (68%), Positives = 96/119 (80%), Gaps = 4/119 (3%)
 Frame = +3

Query: 258 SMAKSMSFCCVILGFLCLT----ALAKSPRPITDYETREKKNTCYADIESGLWGWQCKSS 425
           S A+S SF C++L  L +       +KSPRPI+D E R+KK+ CY DIESGLWGWQCKSS
Sbjct: 4   SQARS-SFVCLLLLLLSMCFVPCVFSKSPRPISDVEIRQKKSECYGDIESGLWGWQCKSS 62

Query: 426 MIAKENCALRCLSSVCYSLVYESDPLEEGEKDHVRSQEYKYCMYRVSMGESLDGVKGSF 602
            IAKENCALRCLS VCY L+YESDPLEEGEKD +RSQEYKYCMY+ S+GESL+GV+G F
Sbjct: 63  AIAKENCALRCLSPVCYQLIYESDPLEEGEKDLIRSQEYKYCMYKSSLGESLEGVRGIF 121


>gb|AAM67126.1| unknown [Arabidopsis thaliana]
          Length = 121

 Score =  171 bits (433), Expect = 2e-40
 Identities = 82/119 (68%), Positives = 96/119 (80%), Gaps = 4/119 (3%)
 Frame = +3

Query: 258 SMAKSMSFCCVILGFLCL----TALAKSPRPITDYETREKKNTCYADIESGLWGWQCKSS 425
           S A+S SF C++L  L +       +KSPRPI+D E R+KK+ CY DIESGLWGWQCKSS
Sbjct: 4   SQARS-SFVCLLLLLLSMFFVPCVFSKSPRPISDVEIRQKKSECYGDIESGLWGWQCKSS 62

Query: 426 MIAKENCALRCLSSVCYSLVYESDPLEEGEKDHVRSQEYKYCMYRVSMGESLDGVKGSF 602
            IAKENCALRCLS VCY L+YESDPLEEGEKD +RSQEYKYCMY+ S+GESL+GV+G F
Sbjct: 63  AIAKENCALRCLSPVCYQLIYESDPLEEGEKDLIRSQEYKYCMYKSSLGESLEGVRGIF 121


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