BLASTX nr result

ID: Cimicifuga21_contig00003053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00003053
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274013.2| PREDICTED: uncharacterized protein LOC100241...   233   5e-59
emb|CBI32644.3| unnamed protein product [Vitis vinifera]              233   5e-59
ref|XP_002525215.1| conserved hypothetical protein [Ricinus comm...   196   7e-48
ref|XP_002308495.1| predicted protein [Populus trichocarpa] gi|2...   177   5e-42
gb|AFK41112.1| unknown [Lotus japonicus] gi|388519667|gb|AFK4789...   166   1e-38

>ref|XP_002274013.2| PREDICTED: uncharacterized protein LOC100241364 [Vitis vinifera]
          Length = 221

 Score =  233 bits (595), Expect = 5e-59
 Identities = 113/180 (62%), Positives = 146/180 (81%), Gaps = 2/180 (1%)
 Frame = -2

Query: 858 QDSFFDPFLQSPNTGFTYAKLLGIGKHTLKTDIINLLESSDLSPQDIKVEYSRVFTPLSM 679
           Q S  DPFLQ P+TG  Y +L GI KHTL+TDI+NLLE  +L+ QD+KV+Y+R + P+ M
Sbjct: 41  QVSSSDPFLQPPSTGLVYGRLSGITKHTLRTDILNLLEGCNLTLQDVKVDYNRSYFPVGM 100

Query: 678 IVKFSAHSGFDNALRVIRGK-RLYKLDKVDRSMWE-IQSFEGKTVLLQGLPRNALPEDVE 505
           +V+F +   FD+A++VI  K RLYKLD+ DRS W+ +++++GKTVLLQGLPRNALPEDVE
Sbjct: 101 MVQFPSRYAFDHAIKVINKKGRLYKLDRADRSQWDPLRTYDGKTVLLQGLPRNALPEDVE 160

Query: 504 RFLSGCEFNSGNLQIFVRQAMPDPVRLALVQFPSRTAAMNAVLQKNRSFCLNNQILMRVL 325
           RFL+GCEFNS N+Q+  RQA PDP+R+ALV FPS++ AMNA + KNR FCLNNQIL+RVL
Sbjct: 161 RFLAGCEFNSSNIQLTTRQAFPDPIRMALVHFPSQSQAMNAFITKNRGFCLNNQILVRVL 220


>emb|CBI32644.3| unnamed protein product [Vitis vinifera]
          Length = 218

 Score =  233 bits (595), Expect = 5e-59
 Identities = 113/180 (62%), Positives = 146/180 (81%), Gaps = 2/180 (1%)
 Frame = -2

Query: 858 QDSFFDPFLQSPNTGFTYAKLLGIGKHTLKTDIINLLESSDLSPQDIKVEYSRVFTPLSM 679
           Q S  DPFLQ P+TG  Y +L GI KHTL+TDI+NLLE  +L+ QD+KV+Y+R + P+ M
Sbjct: 38  QVSSSDPFLQPPSTGLVYGRLSGITKHTLRTDILNLLEGCNLTLQDVKVDYNRSYFPVGM 97

Query: 678 IVKFSAHSGFDNALRVIRGK-RLYKLDKVDRSMWE-IQSFEGKTVLLQGLPRNALPEDVE 505
           +V+F +   FD+A++VI  K RLYKLD+ DRS W+ +++++GKTVLLQGLPRNALPEDVE
Sbjct: 98  MVQFPSRYAFDHAIKVINKKGRLYKLDRADRSQWDPLRTYDGKTVLLQGLPRNALPEDVE 157

Query: 504 RFLSGCEFNSGNLQIFVRQAMPDPVRLALVQFPSRTAAMNAVLQKNRSFCLNNQILMRVL 325
           RFL+GCEFNS N+Q+  RQA PDP+R+ALV FPS++ AMNA + KNR FCLNNQIL+RVL
Sbjct: 158 RFLAGCEFNSSNIQLTTRQAFPDPIRMALVHFPSQSQAMNAFITKNRGFCLNNQILVRVL 217


>ref|XP_002525215.1| conserved hypothetical protein [Ricinus communis]
            gi|223535512|gb|EEF37181.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 221

 Score =  196 bits (499), Expect = 7e-48
 Identities = 113/244 (46%), Positives = 152/244 (62%), Gaps = 8/244 (3%)
 Frame = -2

Query: 1029 MSLLLRNVIRSNGFLRIKP-----NQCQHLLHREPQKPHFXXXXXXXXXXXXXXXXXXXX 865
            MSLLLRN I+SN    +KP        Q      P  PH                     
Sbjct: 1    MSLLLRNAIKSN--FALKPFNALRQSSQLFSTLPPPPPHHQD------------------ 40

Query: 864  SLQDSFFDPFLQSPNTGFTYAKLLGIGKHTLKTDIINLL-ESSDLSPQDIKVEYSRVFTP 688
                S  DPFLQ+   G  Y KL GI +HTLKTD+INLL E   L+P DIK+ Y+  + P
Sbjct: 41   --DPSPIDPFLQTAGQGVVYGKLFGITRHTLKTDVINLLGEGCQLTPDDIKLTYAS-YDP 97

Query: 687  LSMIVKFSAHSGFDNALRVIRGK-RLYKLDKVDRSMWE-IQSFEGKTVLLQGLPRNALPE 514
            ++++++F     FDNA + I  K RL++L++ DRS W+ I  ++GKTVLLQG+P  A PE
Sbjct: 98   VAVMIQFPTRQAFDNAFKTIGKKGRLHRLERADRSQWDYIMPYDGKTVLLQGIPEYAAPE 157

Query: 513  DVERFLSGCEFNSGNLQIFVRQAMPDPVRLALVQFPSRTAAMNAVLQKNRSFCLNNQILM 334
            DVERFLSGCEF+S ++++F RQ++P+ +R+ALV+F +RTAAMNA + KN+ FC NN+I M
Sbjct: 158  DVERFLSGCEFDSSSIRLFRRQSVPEAIRVALVRFHTRTAAMNAFITKNQGFCSNNKISM 217

Query: 333  RVLQ 322
            RVLQ
Sbjct: 218  RVLQ 221


>ref|XP_002308495.1| predicted protein [Populus trichocarpa] gi|222854471|gb|EEE92018.1|
            predicted protein [Populus trichocarpa]
          Length = 258

 Score =  177 bits (448), Expect = 5e-42
 Identities = 112/266 (42%), Positives = 146/266 (54%), Gaps = 31/266 (11%)
 Frame = -2

Query: 1029 MSLLLRNVIRSNGFLR-IKPNQCQHLLHREPQKPHFXXXXXXXXXXXXXXXXXXXXSLQD 853
            MSLLLR  I+SN  L+  KPN    L  R+  K HF                        
Sbjct: 1    MSLLLRKTIKSNSSLQSFKPNNALSLFLRQSTK-HFSTETQPPPPPQENN--------DP 51

Query: 852  SFFDPFLQSPNTGFTYAKLLGIGKHTLKTDIINLLESSDLSPQDIKVEYSRV-FTPLSMI 676
            S  DPFLQ   T  TYA+  G+ KHTLKTDIINL E S+L+P DI V + R    P +  
Sbjct: 52   SSIDPFLQDSATSLTYARFHGVRKHTLKTDIINLFEGSNLTPDDIIVVHHRFNNNPYAAA 111

Query: 675  VKFSAHSGFDNALR-VIRGKRLYKLDKVDRSMWEI---QSFEGKTVLLQGLPRNALPEDV 508
            +KF +   +DNA R + R  R+Y L+K   ++W+     S++GKTVLL+GLP NAL ED+
Sbjct: 112  IKFPSRRAYDNAQRSLTRAGRIYNLEKTPPTVWDAALRNSYDGKTVLLEGLPPNALNEDI 171

Query: 507  ERFLSGCEFNSGNLQIFVRQAMP-------------------------DPVRLALVQFPS 403
            ERFLSGC+F   +++ FV+   P                         DP+R+A V F +
Sbjct: 172  ERFLSGCKFVPSSIRTFVKYPDPVMSAGRKNPTTSAGKQDGTTSEEKRDPIRMATVLFST 231

Query: 402  RTAAMNAVLQKNRSFCLNNQILMRVL 325
            RT AMNA+++KNR FCLNNQI +RVL
Sbjct: 232  RTEAMNALIKKNRGFCLNNQISVRVL 257


>gb|AFK41112.1| unknown [Lotus japonicus] gi|388519667|gb|AFK47895.1| unknown
           [Lotus japonicus]
          Length = 224

 Score =  166 bits (419), Expect = 1e-38
 Identities = 80/175 (45%), Positives = 127/175 (72%), Gaps = 2/175 (1%)
 Frame = -2

Query: 840 PFLQSPNTGFTYAKLLGIGKHTLKTDIINLLESSDLSPQDIKVEYSRVFTPLSMIVKFSA 661
           PF ++ N+G TYA+L GI ++ LKTD+I+ LE  +L+ +D+KVEY+R F PL+M+++F  
Sbjct: 53  PFFETDNSGLTYARLHGIHRNMLKTDVISFLEGCNLTLEDVKVEYNRNFFPLAMLLQFPT 112

Query: 660 HSGFDNALRV-IRGKRLYKLDKVDRSMWEIQS-FEGKTVLLQGLPRNALPEDVERFLSGC 487
            S + NA++V ++  R YK + VDR  W+I + ++GK +++QG+P NA  ED+ER LSGC
Sbjct: 113 RSDYSNAIKVNLKNGRFYKFEMVDRGHWDIVTPYDGKAIVIQGIPMNAAFEDIERTLSGC 172

Query: 486 EFNSGNLQIFVRQAMPDPVRLALVQFPSRTAAMNAVLQKNRSFCLNNQILMRVLQ 322
           ++++ ++ I  R  +    +LA V+FPSRT AM+A + KNR+FCLNN++ + VLQ
Sbjct: 173 DYDASSVSIRPRDVLS---KLATVRFPSRTKAMSAFITKNRTFCLNNRVSVEVLQ 224


Top