BLASTX nr result

ID: Cimicifuga21_contig00002998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002998
         (1572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vit...   575   e-162
ref|XP_002512768.1| Membrane protein PB1A10.07c, putative [Ricin...   572   e-160
ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|2...   571   e-160
ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|1...   568   e-159
ref|XP_003552131.1| PREDICTED: probable serine incorporator-like...   565   e-158

>ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vitis vinifera]
            gi|298204750|emb|CBI25248.3| unnamed protein product
            [Vitis vinifera]
          Length = 413

 Score =  575 bits (1483), Expect = e-162
 Identities = 282/397 (71%), Positives = 309/397 (77%)
 Frame = -2

Query: 1400 RSVVGSISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHQTPNREWFETDA 1221
            R+VV  ISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFH+TPNREWFETDA
Sbjct: 20   RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPNREWFETDA 79

Query: 1220 VLRVSLGNFLFFTIFAFMMVGVKDQKDPRDRLHHGGWMMKIVSWCLIVIFMFFLPNGIVS 1041
            VLRVS GNFLFFTI A +M+GVK+QKDPRD +HHGGWMMKI+ WC++VIF FFLPN ++S
Sbjct: 80   VLRVSFGNFLFFTILAILMIGVKNQKDPRDGMHHGGWMMKIICWCILVIFTFFLPNELIS 139

Query: 1040 FYESMSKFGSGXXXXXXXXXXXXXVHGWNDKWVKKDEQFWYIALFVISLVCYIATFGFSG 861
            FYE+ SKFGSG             VH WND WV   EQFWYIALFV+SLVCY+ATF FSG
Sbjct: 140  FYETTSKFGSGLFLLVQVVLLLDFVHRWNDTWVGYGEQFWYIALFVVSLVCYVATFSFSG 199

Query: 860  LLFHFFTPSGHDCGLNTXXXXXXXXXXXXXXXXXLHPAVSGSLLPASVISLYCTYLCYSG 681
            LLFHFFTPSGHDCGLNT                 LHPAV GS+LPASV+SLYC YLCYSG
Sbjct: 200  LLFHFFTPSGHDCGLNTFFIVMTLILAFVFAIVALHPAVGGSILPASVVSLYCMYLCYSG 259

Query: 680  LSSEPRDYECNGLHKHSKAIXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRAAG 501
            LSSEPRDYECNGLHKHSKA+                +YSAVRAG           PR AG
Sbjct: 260  LSSEPRDYECNGLHKHSKAVSTGTLTLGLLTTILSVIYSAVRAGSSTTLLSPPSSPR-AG 318

Query: 500  AEKPLLPFQKMDEVDEKRDEKSRAVTYSYSFFHLIFSLASMYSAMLLTGWSTSVGESGKL 321
            A KPLLP +K D  +EK + K   VTYSY+FFH+IFSLASMYSAMLLTGWSTSVGESG+L
Sbjct: 319  AGKPLLPLEKTDVPEEKHEAK--PVTYSYTFFHIIFSLASMYSAMLLTGWSTSVGESGRL 376

Query: 320  VDVGWPSVWVRIITGWATAILYVWSLVAPVLFPEREF 210
            VDVGWPSVWVRI+TGWATA LY+WSL AP+LFPEREF
Sbjct: 377  VDVGWPSVWVRIVTGWATAALYIWSLAAPILFPEREF 413


>ref|XP_002512768.1| Membrane protein PB1A10.07c, putative [Ricinus communis]
            gi|223547779|gb|EEF49271.1| Membrane protein PB1A10.07c,
            putative [Ricinus communis]
          Length = 413

 Score =  572 bits (1474), Expect = e-160
 Identities = 285/397 (71%), Positives = 310/397 (78%)
 Frame = -2

Query: 1400 RSVVGSISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHQTPNREWFETDA 1221
            R+VV  ISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFH+TP+REWFETDA
Sbjct: 20   RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDA 79

Query: 1220 VLRVSLGNFLFFTIFAFMMVGVKDQKDPRDRLHHGGWMMKIVSWCLIVIFMFFLPNGIVS 1041
            VLRVSLGNFLFFTI A +MVGVK QKDPRD LHHGGWMMKI+ WC++VIFMFFLPN IVS
Sbjct: 80   VLRVSLGNFLFFTILATLMVGVKSQKDPRDGLHHGGWMMKIICWCVLVIFMFFLPNEIVS 139

Query: 1040 FYESMSKFGSGXXXXXXXXXXXXXVHGWNDKWVKKDEQFWYIALFVISLVCYIATFGFSG 861
            FYESMSKFGSG             VHGWNDKWV  +EQFWYIALFV+SLVCY+ATF FSG
Sbjct: 140  FYESMSKFGSGLFLLVQVVLLLDFVHGWNDKWVGYNEQFWYIALFVVSLVCYLATFVFSG 199

Query: 860  LLFHFFTPSGHDCGLNTXXXXXXXXXXXXXXXXXLHPAVSGSLLPASVISLYCTYLCYSG 681
             LFH+FTPSG DCGLNT                 LHPAVSGS+LPASVIS YC YLCYSG
Sbjct: 200  FLFHWFTPSGQDCGLNTFFITMTLILVIVFAIVALHPAVSGSILPASVISAYCMYLCYSG 259

Query: 680  LSSEPRDYECNGLHKHSKAIXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRAAG 501
            L+SEPR+YECNGLHKHSKA+                VYSAVRAG           PRA  
Sbjct: 260  LASEPREYECNGLHKHSKAVSTGTLSIGLLTTVLSVVYSAVRAGSSTTLLSPPSSPRAG- 318

Query: 500  AEKPLLPFQKMDEVDEKRDEKSRAVTYSYSFFHLIFSLASMYSAMLLTGWSTSVGESGKL 321
              KPLLP +     + +  EK++ VTYSY+FFH+IFSLASMYSAMLLTGWSTSVGESGKL
Sbjct: 319  --KPLLPLENKIAEEHEEKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKL 376

Query: 320  VDVGWPSVWVRIITGWATAILYVWSLVAPVLFPEREF 210
            VDVGWPSVWVRIITGWATA LYVWSL+AP+LFP+REF
Sbjct: 377  VDVGWPSVWVRIITGWATAGLYVWSLLAPILFPDREF 413


>ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|222842271|gb|EEE79818.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score =  571 bits (1471), Expect = e-160
 Identities = 280/396 (70%), Positives = 310/396 (78%)
 Frame = -2

Query: 1397 SVVGSISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHQTPNREWFETDAV 1218
            +VV  ISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFH+TP+REWFETDAV
Sbjct: 21   TVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDAV 80

Query: 1217 LRVSLGNFLFFTIFAFMMVGVKDQKDPRDRLHHGGWMMKIVSWCLIVIFMFFLPNGIVSF 1038
            LRVSLGNF+FFTI A MMVGVK+QKDPRD LHHGGWM K+V WC++VI MFFLPN IVSF
Sbjct: 81   LRVSLGNFMFFTILATMMVGVKNQKDPRDSLHHGGWMAKVVCWCILVILMFFLPNEIVSF 140

Query: 1037 YESMSKFGSGXXXXXXXXXXXXXVHGWNDKWVKKDEQFWYIALFVISLVCYIATFGFSGL 858
            YES+SKFGSG             VHGWNDKWV  DE+FWY+ALFV+SLVCY+ TF FSGL
Sbjct: 141  YESISKFGSGLFLLVQVVLLLDFVHGWNDKWVGYDEKFWYVALFVVSLVCYVGTFAFSGL 200

Query: 857  LFHFFTPSGHDCGLNTXXXXXXXXXXXXXXXXXLHPAVSGSLLPASVISLYCTYLCYSGL 678
            LFH+FTPSG DCGLNT                 LHPAV+GS+LPASVISLYC YLCYSGL
Sbjct: 201  LFHWFTPSGQDCGLNTFFIVMTLIFAFVFAIVALHPAVNGSVLPASVISLYCMYLCYSGL 260

Query: 677  SSEPRDYECNGLHKHSKAIXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRAAGA 498
            +SEPR+YECNGLH+HSKA+                VYSAVRAG           PR AGA
Sbjct: 261  ASEPREYECNGLHRHSKAVSTGTLSIGLLTTVLSVVYSAVRAGSSTALLSPPSSPR-AGA 319

Query: 497  EKPLLPFQKMDEVDEKRDEKSRAVTYSYSFFHLIFSLASMYSAMLLTGWSTSVGESGKLV 318
            +KPLLP        E++++  + VTYSYSFFH+IFSLASMYSAMLLTGWSTS+GESGKLV
Sbjct: 320  DKPLLPLDNKANEQEEKEKACKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSIGESGKLV 379

Query: 317  DVGWPSVWVRIITGWATAILYVWSLVAPVLFPEREF 210
            DVGWPSVWVRI+TGWATA LY WSLVAP+LFPEREF
Sbjct: 380  DVGWPSVWVRILTGWATAGLYTWSLVAPILFPEREF 415


>ref|XP_002297693.1| predicted protein [Populus trichocarpa] gi|118488403|gb|ABK96018.1|
            unknown [Populus trichocarpa] gi|222844951|gb|EEE82498.1|
            predicted protein [Populus trichocarpa]
          Length = 414

 Score =  568 bits (1465), Expect = e-159
 Identities = 285/397 (71%), Positives = 311/397 (78%), Gaps = 1/397 (0%)
 Frame = -2

Query: 1397 SVVGSISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHQTPNREWFETDAV 1218
            +VV  ISRRSARIAYCGLFALSLIVSWILREVAAPLME++PWINHFH+TP+REWFETDAV
Sbjct: 21   TVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEQIPWINHFHKTPDREWFETDAV 80

Query: 1217 LRVSLGNFLFFTIFAFMMVGVKDQKDPRDRLHHGGWMMKIVSWCLIVIFMFFLPNGIVSF 1038
            LRVSLGNFLFFTI A MMVGVK+QKDPRD LHHGGWM K+V WCL+VIFMFFLPN IVSF
Sbjct: 81   LRVSLGNFLFFTILAIMMVGVKNQKDPRDSLHHGGWMAKVVCWCLLVIFMFFLPNEIVSF 140

Query: 1037 YESMSKFGSGXXXXXXXXXXXXXVHGWNDKWVKKDEQFWYIALFVISLVCYIATFGFSGL 858
            YES+SKFGSG             VHGWNDKWV  DEQFWY ALF +S VCY+ TF FSGL
Sbjct: 141  YESISKFGSGLFLLVQVVLLLDFVHGWNDKWVGYDEQFWYAALFAVSFVCYVGTFAFSGL 200

Query: 857  LFHFFTPSGHDCGLNTXXXXXXXXXXXXXXXXXLHPAVSGSLLPASVISLYCTYLCYSGL 678
            LFH+FT SG DCGLNT                 LHPAV+GS+LPASVISLYC YLCYSGL
Sbjct: 201  LFHWFTASGQDCGLNTFFIVMTLIFAFVFAIAALHPAVNGSVLPASVISLYCMYLCYSGL 260

Query: 677  SSEPRDYECNGLHKHSKAIXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRAAGA 498
            SSEPR+YECNGLH+HSKA+                VYSAVRAG           PR AGA
Sbjct: 261  SSEPREYECNGLHRHSKAVSTSTLTIGLLTTVLSVVYSAVRAGSSTTLLSPPSSPR-AGA 319

Query: 497  EKPLLPF-QKMDEVDEKRDEKSRAVTYSYSFFHLIFSLASMYSAMLLTGWSTSVGESGKL 321
            +KPLLP   K  E +EK  EK++ VTYSYSFFH+IFSLASMYSAMLLTGWSTSVGESGKL
Sbjct: 320  DKPLLPLDNKPSEKEEK--EKAKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKL 377

Query: 320  VDVGWPSVWVRIITGWATAILYVWSLVAPVLFPEREF 210
            VDVGWPSVWVRI+TGWATA LY+WSLVAP+LFP+REF
Sbjct: 378  VDVGWPSVWVRILTGWATAGLYIWSLVAPILFPDREF 414


>ref|XP_003552131.1| PREDICTED: probable serine incorporator-like [Glycine max]
          Length = 410

 Score =  565 bits (1455), Expect = e-158
 Identities = 277/397 (69%), Positives = 309/397 (77%)
 Frame = -2

Query: 1400 RSVVGSISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHQTPNREWFETDA 1221
            R+VV  ISRRSARIAYCGLFA SL+V+WILREVAAPLME LPWINHF  TP+REWFETDA
Sbjct: 20   RTVVSGISRRSARIAYCGLFAFSLVVAWILREVAAPLMESLPWINHFKHTPSREWFETDA 79

Query: 1220 VLRVSLGNFLFFTIFAFMMVGVKDQKDPRDRLHHGGWMMKIVSWCLIVIFMFFLPNGIVS 1041
            VLRVSLGNFLFFTI A +MVGVK Q+DPRD +HHGGWMMKI+ WCL+VI MFF+PN I+S
Sbjct: 80   VLRVSLGNFLFFTILAILMVGVKTQRDPRDSMHHGGWMMKIICWCLLVISMFFIPNEIIS 139

Query: 1040 FYESMSKFGSGXXXXXXXXXXXXXVHGWNDKWVKKDEQFWYIALFVISLVCYIATFGFSG 861
            FYE++SKFGSG             VHGWNDKWV  DEQFWYIALFV+SLVCY+ATF FSG
Sbjct: 140  FYETISKFGSGMFLLVQVMLLLDFVHGWNDKWVGFDEQFWYIALFVVSLVCYVATFAFSG 199

Query: 860  LLFHFFTPSGHDCGLNTXXXXXXXXXXXXXXXXXLHPAVSGSLLPASVISLYCTYLCYSG 681
            +LFHFFTPSGHDCGLN                  LHPAV+GS+LPASVISLYCTYLCYS 
Sbjct: 200  VLFHFFTPSGHDCGLNVFFITMTLILAFIFAIVALHPAVNGSVLPASVISLYCTYLCYSA 259

Query: 680  LSSEPRDYECNGLHKHSKAIXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRAAG 501
            L+SEPRDYECNGLHKHSKA+                VYSAVRAG           PRA  
Sbjct: 260  LASEPRDYECNGLHKHSKAVSTGTITLGLATTVLSVVYSAVRAGSSAAVLSPPSSPRAG- 318

Query: 500  AEKPLLPFQKMDEVDEKRDEKSRAVTYSYSFFHLIFSLASMYSAMLLTGWSTSVGESGKL 321
              KPLLP   +D  +++  EK++ VTYSY+FFHLIFSLASMYSAMLLTGWSTSVGESGKL
Sbjct: 319  --KPLLP---LDAKEDEEKEKAKPVTYSYAFFHLIFSLASMYSAMLLTGWSTSVGESGKL 373

Query: 320  VDVGWPSVWVRIITGWATAILYVWSLVAPVLFPEREF 210
            VDVGWPSVWVRIIT WATA+LY+WSL+AP++FPEREF
Sbjct: 374  VDVGWPSVWVRIITSWATALLYLWSLIAPIMFPEREF 410


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