BLASTX nr result

ID: Cimicifuga21_contig00002979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002979
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinif...   331   3e-88
ref|XP_003517407.1| PREDICTED: MADS-box protein SVP-like [Glycin...   327   4e-87
gb|AFA37967.1| SVP1 [Actinidia chinensis]                             325   2e-86
ref|NP_001240951.1| MADS-box protein SVP-like [Glycine max] gi|1...   325   2e-86
gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL...   325   2e-86

>ref|XP_002269295.1| PREDICTED: MADS-box protein SVP [Vitis vinifera]
           gi|297744859|emb|CBI38273.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  331 bits (848), Expect = 3e-88
 Identities = 173/226 (76%), Positives = 200/226 (88%), Gaps = 2/226 (0%)
 Frame = +3

Query: 60  MAREKIQIKKIDNTTARQVTFSKRRRGLFKKAAELSILCDADVAVIIFSATGKLFEYSSL 239
           MAREKIQIKKIDN TARQVTFSKRRRGLFKKA ELS+LCDADVA+IIFS+TGKLFE+SS 
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFSSS 60

Query: 240 SMKEILERHNLQSKNLHKMEEPSLELQL-ENGNYARLSKEVAERSRQLRNMRGEELQGLN 416
           SMKEILE+H+LQSKNL K+E+PSLELQL EN N++RLSKEVA++S +LR MRGEELQGLN
Sbjct: 61  SMKEILEKHSLQSKNLEKLEQPSLELQLVENNNHSRLSKEVADKSHKLRQMRGEELQGLN 120

Query: 417 IEELQQLEKSLETGLGRVLETKSERIMNEISTLQAKGKQLMEENERLR-QMVGMTRGQKH 593
           IE+LQQLEKSLE GL RV++ K ERIM EI+ LQ+KG QLMEENERLR Q+V ++  ++ 
Sbjct: 121 IEDLQQLEKSLEAGLSRVIQKKGERIMKEITDLQSKGVQLMEENERLRQQVVEISNRRRQ 180

Query: 594 VAVDSDNAAHEEGQSSESVTNICNSGGAPQDYDSSDTSLKLGLPFS 731
           VA DS+N  HEEGQSSESVTN+ NS G PQDY+SSDTSLKLGLP+S
Sbjct: 181 VAGDSENMFHEEGQSSESVTNVSNSNGPPQDYESSDTSLKLGLPYS 226


>ref|XP_003517407.1| PREDICTED: MADS-box protein SVP-like [Glycine max]
          Length = 227

 Score =  327 bits (838), Expect = 4e-87
 Identities = 171/226 (75%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
 Frame = +3

Query: 60  MAREKIQIKKIDNTTARQVTFSKRRRGLFKKAAELSILCDADVAVIIFSATGKLFEYSSL 239
           MAREKIQIKKIDN TARQVTFSKRRRGLFKKA ELS+LCDADVA+IIFS+TGKLFEYSS 
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYSSS 60

Query: 240 SMKEILERHNLQSKNLHKMEEPSLELQL-ENGNYARLSKEVAERSRQLRNMRGEELQGLN 416
           SMKEILERH+L SKNL +ME+PSLELQL EN N +RLSKEVAE+S QLR +RGE+LQGLN
Sbjct: 61  SMKEILERHHLHSKNLARMEQPSLELQLVENSNCSRLSKEVAEKSHQLRQLRGEDLQGLN 120

Query: 417 IEELQQLEKSLETGLGRVLETKSERIMNEISTLQAKGKQLMEENERL-RQMVGMTRGQKH 593
           IEELQQLE SLETGLGR++E K E+IM+EI+ LQ KG  LMEENERL R + G+  GQ+H
Sbjct: 121 IEELQQLEMSLETGLGRIIEKKGEKIMSEIADLQRKGMLLMEENERLKRHVAGIINGQRH 180

Query: 594 VAVDSDNAAHEEGQSSESVTNICNSGGAPQDYDSSDTSLKLGLPFS 731
              +S+N   +EGQSSESVT +CNS G PQDY+SSDTSLKLGLP+S
Sbjct: 181 GGAESENFVMDEGQSSESVTYVCNSTGLPQDYESSDTSLKLGLPYS 226


>gb|AFA37967.1| SVP1 [Actinidia chinensis]
          Length = 227

 Score =  325 bits (832), Expect = 2e-86
 Identities = 170/226 (75%), Positives = 191/226 (84%), Gaps = 2/226 (0%)
 Frame = +3

Query: 60  MAREKIQIKKIDNTTARQVTFSKRRRGLFKKAAELSILCDADVAVIIFSATGKLFEYSSL 239
           MAREKI+I+KI+N TARQVTFSKRRRGLFKKA ELS+LCDADVA+IIFS+TGKLF YSS 
Sbjct: 1   MAREKIKIRKINNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFHYSST 60

Query: 240 SMKEILERHNLQSKNLHKMEEPSLELQL-ENGNYARLSKEVAERSRQLRNMRGEELQGLN 416
            MK ILERHN+ SKNL K+E+PS ELQL EN NY RLSKEV E+S QLR MRGEELQGLN
Sbjct: 61  DMKGILERHNVHSKNLEKLEQPSTELQLVENSNYTRLSKEVVEKSHQLRKMRGEELQGLN 120

Query: 417 IEELQQLEKSLETGLGRVLETKSERIMNEISTLQAKGKQLMEENERLRQMV-GMTRGQKH 593
           IEELQQLE+SLE GLGRV+E K E+IMNEI+ LQ KG  LM+ENERLRQ V    + +KH
Sbjct: 121 IEELQQLERSLEAGLGRVIEKKGEKIMNEITHLQQKGMHLMDENERLRQQVMEACKARKH 180

Query: 594 VAVDSDNAAHEEGQSSESVTNICNSGGAPQDYDSSDTSLKLGLPFS 731
            A DSDN  +E+GQSSESVTNICNS G  QDY+SSDTSLKLGLP+S
Sbjct: 181 SATDSDNVINEQGQSSESVTNICNSTGPMQDYESSDTSLKLGLPYS 226


>ref|NP_001240951.1| MADS-box protein SVP-like [Glycine max] gi|166014267|gb|ABY78023.1|
           short vegetative phase-like protein [Glycine max]
          Length = 227

 Score =  325 bits (832), Expect = 2e-86
 Identities = 169/226 (74%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
 Frame = +3

Query: 60  MAREKIQIKKIDNTTARQVTFSKRRRGLFKKAAELSILCDADVAVIIFSATGKLFEYSSL 239
           M REKIQIKKIDN TARQVTFSKRRRGLFKKA ELS++CDADVA+IIFS+TGKLFEYSS 
Sbjct: 1   MVREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVMCDADVALIIFSSTGKLFEYSSS 60

Query: 240 SMKEILERHNLQSKNLHKMEEPSLELQL-ENGNYARLSKEVAERSRQLRNMRGEELQGLN 416
           SMKEILERH+L SKNL +ME+PSLELQL EN N +RLSKEVAE+S QLR +RGE+LQGLN
Sbjct: 61  SMKEILERHHLHSKNLARMEQPSLELQLVENSNCSRLSKEVAEKSHQLRQLRGEDLQGLN 120

Query: 417 IEELQQLEKSLETGLGRVLETKSERIMNEISTLQAKGKQLMEENERL-RQMVGMTRGQKH 593
           IEELQQLE+SLETGLGRV+E K E+IM+EI+ LQ KG  LMEENERL R + G+  GQ+H
Sbjct: 121 IEELQQLERSLETGLGRVIEKKGEKIMSEITDLQRKGMLLMEENERLKRHVAGIINGQRH 180

Query: 594 VAVDSDNAAHEEGQSSESVTNICNSGGAPQDYDSSDTSLKLGLPFS 731
              +S+N   +EGQSSESVT +CNS G PQD++SSDTSLKLGLP+S
Sbjct: 181 GGAESENFVMDEGQSSESVTYVCNSTGPPQDFESSDTSLKLGLPYS 226


>gb|ABD66219.2| JOINTLESS [Malus x domestica] gi|302398887|gb|ADL36738.1| MADS
           domain class transcription factor [Malus x domestica]
          Length = 224

 Score =  325 bits (832), Expect = 2e-86
 Identities = 171/222 (77%), Positives = 189/222 (85%), Gaps = 2/222 (0%)
 Frame = +3

Query: 60  MAREKIQIKKIDNTTARQVTFSKRRRGLFKKAAELSILCDADVAVIIFSATGKLFEYSSL 239
           MAREKIQIKKIDN TARQVTFSKRRRGL KKA ELS+LCDAD+A+IIFS+TGKLFEY+S 
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLLKKAEELSVLCDADIALIIFSSTGKLFEYASS 60

Query: 240 SMKEILERHNLQSKNLHKMEEPSLELQL-ENGNYARLSKEVAERSRQLRNMRGEELQGLN 416
           SMKEILERHNL SKNL K+E+PSL+LQL EN NY RLSKE+A +S QLR MRGEE+QGLN
Sbjct: 61  SMKEILERHNLHSKNLEKLEQPSLQLQLVENSNYTRLSKEIAAKSHQLRQMRGEEIQGLN 120

Query: 417 IEELQQLEKSLETGLGRVLETKSERIMNEISTLQAKGKQLMEENERLRQMVG-MTRGQKH 593
           +EELQQLEKSLETGLGRV+E KSE+IM EI  LQ  G QLMEENERLRQ V   + G++ 
Sbjct: 121 LEELQQLEKSLETGLGRVIEKKSEKIMKEIGDLQRNGMQLMEENERLRQQVAEKSDGRRL 180

Query: 594 VAVDSDNAAHEEGQSSESVTNICNSGGAPQDYDSSDTSLKLG 719
           V VDS+N   EEGQSSESVTN CNS   PQDYDSSDTSLKLG
Sbjct: 181 VQVDSENMFTEEGQSSESVTNPCNSNNGPQDYDSSDTSLKLG 222


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