BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002977
         (1177 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271757.1| PREDICTED: E3 ubiquitin-protein ligase SINA-...   260   4e-67
emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera]   257   5e-66
ref|XP_002532642.1| ubiquitin-protein ligase, putative [Ricinus ...   238   2e-60
ref|XP_002327611.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-58
gb|ACU24390.1| unknown [Glycine max]                                  227   5e-57

>ref|XP_002271757.1| PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Vitis
           vinifera]
          Length = 355

 Score =  260 bits (665), Expect = 4e-67
 Identities = 134/277 (48%), Positives = 181/277 (65%), Gaps = 5/277 (1%)
 Frame = +1

Query: 82  VIEDVYGSEANLDVHH--HHATVGESSKEETGMSVIFTDPEVLDCSICMETLSPPVFQCE 255
           +++D +G E    V       + G  +  +  +SVI TDPEVLDCSIC+E LS PVFQCE
Sbjct: 70  IVDDEHGQEIVEAVRDPGQGTSSGSEANRDASVSVILTDPEVLDCSICLEPLSVPVFQCE 129

Query: 256 NGHIACSPCCTKIHNKCPSCSWPIGYNRCLAIEKVIESIKVSCGYKPYGCGETLSYMHKH 435
           NGHIACS CCTK+ N+CPSCSWPIGYNRC AIEKV+ES+KVSC    YGC ET+SY  KH
Sbjct: 130 NGHIACSSCCTKLSNRCPSCSWPIGYNRCRAIEKVLESVKVSCQNTAYGCKETVSYGKKH 189

Query: 436 RHEETCIYAPCICPMSDCDFCGLSKQLSLHFSNQHGASARRFQYNC--PFSVSFGKLDPY 609
            HE TC Y PC CP S+C+F G SKQL+ HF ++H  S  RFQYN   P  + F  +D +
Sbjct: 190 DHEVTCNYVPCSCPHSNCNFRGSSKQLAQHFRSKHLNSVIRFQYNSFFPVHLEFNAVDKF 249

Query: 610 LIFQGEEDDGGPLFVMNNQLELIGNAVTVACXXXXXXXXXXXXYDLVSKKEGSALRMQSH 789
            I + +E   G LF++++ ++ +G+AVTV              ++L + K   ++ +QS 
Sbjct: 250 CILEAKE---GALFIVSSSIQQLGHAVTVC--RIGPRSSRGHAFNLAAWKGDRSIMLQSF 304

Query: 790 TKCIKERADVSSV-VDFLLVPFDFCCSSGKLKLEICI 897
           T+ I+E  ++ S+ + FLL+P  F  SSG+LKLE+CI
Sbjct: 305 TENIREVVELPSLSMGFLLIPNAFLGSSGQLKLELCI 341


>emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera]
          Length = 355

 Score =  257 bits (656), Expect = 5e-66
 Identities = 133/277 (48%), Positives = 179/277 (64%), Gaps = 5/277 (1%)
 Frame = +1

Query: 82  VIEDVYGSEANLDVHH--HHATVGESSKEETGMSVIFTDPEVLDCSICMETLSPPVFQCE 255
           +++D +G E    V       + G  +  +  +SVI TDPEVLDCSIC+E LS PVFQCE
Sbjct: 70  IVDDEHGQEIVEXVRDPGQGTSSGSEANRDASVSVILTDPEVLDCSICLEPLSVPVFQCE 129

Query: 256 NGHIACSPCCTKIHNKCPSCSWPIGYNRCLAIEKVIESIKVSCGYKPYGCGETLSYMHKH 435
           NGHIACS CCTK+ N+CPSCSWPIGYNRC AIEKV+ES+KVSC    YGC ET+SY  K 
Sbjct: 130 NGHIACSSCCTKLSNRCPSCSWPIGYNRCRAIEKVLESVKVSCQNTAYGCKETVSYXKKX 189

Query: 436 RHEETCIYAPCICPMSDCDFCGLSKQLSLHFSNQHGASARRFQYNC--PFSVSFGKLDPY 609
            HE TC Y PC CP S+C+F G SKQL+ HF ++H  S  RFQYN   P  + F  +D +
Sbjct: 190 DHEVTCNYVPCSCPHSNCNFRGSSKQLAQHFRSKHLNSVIRFQYNSFFPVHLEFNAVDKF 249

Query: 610 LIFQGEEDDGGPLFVMNNQLELIGNAVTVACXXXXXXXXXXXXYDLVSKKEGSALRMQSH 789
            I + +E   G LF++++ ++ +G+AVTV              ++L + K   ++ +QS 
Sbjct: 250 CILEAKE---GALFIVSSSIQQLGHAVTVC--RIGPRSSRGHAFNLAAWKGDRSIMLQSF 304

Query: 790 TKCIKERADVSSV-VDFLLVPFDFCCSSGKLKLEICI 897
           T+ I+E   + S+ + FLL+P  F  SSG+LKLE+CI
Sbjct: 305 TENIREVVXLPSLSMGFLLIPNAFLGSSGQLKLELCI 341


>ref|XP_002532642.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527633|gb|EEF29745.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 374

 Score =  238 bits (607), Expect = 2e-60
 Identities = 131/298 (43%), Positives = 171/298 (57%), Gaps = 1/298 (0%)
 Frame = +1

Query: 10  DRDEEEETAEDPSTSRPSHKKQKRVIEDVYGSEANLDVHHHHATVGESSKEETGMSVIFT 189
           D +EEEE++E+        ++ +    D     A ++       VG +      + V  T
Sbjct: 58  DEEEEEESSEEEEEDDDDDEEDEAEGLDENTQMAIVEPPRSSNPVGTA--RNAAICVTLT 115

Query: 190 DPEVLDCSICMETLSPPVFQCENGHIACSPCCTKIHNKCPSCSWPIGYNRCLAIEKVIES 369
           DPEVLDC IC E LS PVFQCENGH ACS CC K+ +KCPSCS PIGYNRC AIEKV+ES
Sbjct: 116 DPEVLDCPICYECLSIPVFQCENGHTACSSCCRKLAHKCPSCSLPIGYNRCRAIEKVLES 175

Query: 370 IKVSCGYKPYGCGETLSYMHKHRHEETCIYAPCICPMSDCDFCGLSKQLSLHFSNQHGAS 549
           +K+ C    YGC E +SY  K  H++ C  APC CP+S C F G S+QL  HFS +H  S
Sbjct: 176 VKLPCHNLKYGCKEMVSYSKKLDHDKICNNAPCSCPLSGCSFVGSSRQLYQHFSIKHKGS 235

Query: 550 ARRFQYNCPFSVSFGKLDPYLIFQGEEDDGGPLFVMNNQLELIGNAVTVACXXXXXXXXX 729
           A  F+YN  F V F   D  LI Q E++  G +F + N  E++GN +TV C         
Sbjct: 236 AAPFRYNITFPVFFTLNDKSLILQEEKE--GVVFFLKNTAEILGNVITVNC-LGGPSSKG 292

Query: 730 XXXYDLVSKKEGSALRMQSHTKCI-KERADVSSVVDFLLVPFDFCCSSGKLKLEICIW 900
              Y+L ++ EGS L+ QS TK I K   D      FL++P  F  S G++ L++CIW
Sbjct: 293 GYFYELAARMEGSNLKFQSFTKNIQKVNHDDPHSDTFLIIPGSFFGSYGQISLDLCIW 350


>ref|XP_002327611.1| predicted protein [Populus trichocarpa] gi|222836165|gb|EEE74586.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  231 bits (590), Expect = 2e-58
 Identities = 110/238 (46%), Positives = 152/238 (63%)
 Frame = +1

Query: 187 TDPEVLDCSICMETLSPPVFQCENGHIACSPCCTKIHNKCPSCSWPIGYNRCLAIEKVIE 366
           +DPEVLDC IC E L+ PVFQC+NGH ACS CC K+ +KCPSC+ PIGYNRC AIEKV+E
Sbjct: 119 SDPEVLDCPICCEPLTIPVFQCDNGHTACSSCCIKLQHKCPSCTMPIGYNRCRAIEKVLE 178

Query: 367 SIKVSCGYKPYGCGETLSYMHKHRHEETCIYAPCICPMSDCDFCGLSKQLSLHFSNQHGA 546
           S+KVSC    YGC E++ Y  K+ H+++C +APC CP+  C++ G SK+L  H   +H  
Sbjct: 179 SLKVSCSNSSYGCKESICYSKKYEHDKSCTHAPCTCPLPACNYQGSSKRLYQHCRIKHLC 238

Query: 547 SARRFQYNCPFSVSFGKLDPYLIFQGEEDDGGPLFVMNNQLELIGNAVTVACXXXXXXXX 726
               FQ+N  F + F     + + Q E++D   LF++ N+ E +GN +TV+C        
Sbjct: 239 DLTSFQFNTSFPLFFMVDHKFRVLQEEKED--VLFILTNRSECLGNVITVSC-MGPSSSK 295

Query: 727 XXXXYDLVSKKEGSALRMQSHTKCIKERADVSSVVDFLLVPFDFCCSSGKLKLEICIW 900
               Y+L +K EGS +R QS T+ I+ R D    + FLLVP DF  + G + L++CIW
Sbjct: 296 QGYFYELTAKAEGSNVRFQSSTRNIQTRVDHPPSLGFLLVPNDFLGTHGGITLDVCIW 353


>gb|ACU24390.1| unknown [Glycine max]
          Length = 320

 Score =  227 bits (578), Expect = 5e-57
 Identities = 128/304 (42%), Positives = 177/304 (58%), Gaps = 6/304 (1%)
 Frame = +1

Query: 10  DRDEEEETAE------DPSTSRPSHKKQKRVIEDVYGSEANLDVHHHHATVGESSKEETG 171
           D DEEE+  +      DPS     ++       D   S  N          G S+++ + 
Sbjct: 29  DDDEEEQQQQRSFEMVDPSIGTQENEDHAAPSNDGSNSNGN--------GAGTSTRDRS- 79

Query: 172 MSVIFTDPEVLDCSICMETLSPPVFQCENGHIACSPCCTKIHNKCPSCSWPIGYNRCLAI 351
           + +  +DP+VLDC IC E L+ PVFQCENGHIACS CC ++ NKCP CS PIGYNRC AI
Sbjct: 80  VPIFVSDPDVLDCCICYEPLTSPVFQCENGHIACSICCVRLSNKCPMCSMPIGYNRCRAI 139

Query: 352 EKVIESIKVSCGYKPYGCGETLSYMHKHRHEETCIYAPCICPMSDCDFCGLSKQLSLHFS 531
           EKV+E IK+SC    YGC ETLSY  K+ HE+ CIY PC CP + CDF   SK+L LHFS
Sbjct: 140 EKVLECIKMSCPNANYGCKETLSYSKKNEHEKECIYLPCSCPFTGCDFIASSKELFLHFS 199

Query: 532 NQHGASARRFQYNCPFSVSFGKLDPYLIFQGEEDDGGPLFVMNNQLELIGNAVTVACXXX 711
           ++H  S  +F Y+  F+V F  ++   +   E+ DG  LFV++N LE +GN V ++C   
Sbjct: 200 HRHVGSGTQFTYDKFFTV-FLSINQRTVVLKEKSDGN-LFVVHNNLEHLGNIVRISC--I 255

Query: 712 XXXXXXXXXYDLVSKKEGSALRMQSHTKCIKERADVSSVVDFLLVPFDFCCSSGKLKLEI 891
                    Y+++++ +G+AL +QS TK ++ +   +    FLL+P      S  LKL+I
Sbjct: 256 GPKSTTEFQYEVLARHQGNALILQSFTKIVQGQYTDAPFSTFLLIP-SCLFGSPHLKLDI 314

Query: 892 CIWS 903
            I S
Sbjct: 315 RIKS 318