BLASTX nr result

ID: Cimicifuga21_contig00002961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002961
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532984.1| conserved hypothetical protein [Ricinus comm...    95   2e-17
ref|XP_002264862.1| PREDICTED: uncharacterized protein LOC100241...    87   4e-15
ref|XP_003553139.1| PREDICTED: uncharacterized protein LOC100817...    86   1e-14
emb|CBI31118.3| unnamed protein product [Vitis vinifera]               86   1e-14
ref|XP_002305247.1| predicted protein [Populus trichocarpa] gi|1...    85   3e-14

>ref|XP_002532984.1| conserved hypothetical protein [Ricinus communis]
           gi|223527230|gb|EEF29392.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 201

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 79/190 (41%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
 Frame = +2

Query: 68  LLLIFSLFA---IGVNGRPGVHFHPCKTLFISSFTISESFXXXXXXXXXXXXXXRFFTIF 238
           LLL+ SL A   I V+ RP      CKTLFISS+T S                  F TI 
Sbjct: 8   LLLLLSLIASLSISVSARP------CKTLFISSYTFS--IRPLNPNPNSNNPSSGFVTIV 59

Query: 239 DFYPTQQPLEIFVSRRPAFDSAYLLPRS----IPTRRFEKPETHHPVVPFD---GSFGGS 397
                +Q     V   P F  A     S    +  ++ ++ E    V+PF     S+  +
Sbjct: 60  TEITQKQQRSSEVFLDPRFFRAVGDDNSESQQVIHQQQQQKEEGGVVLPFGLGLSSYDIN 119

Query: 398 SLRDRTKDILSVVAALLFGVGCGALTSATMYLVWSLVTNRYVVRDG-XXXXXXXXXXXXX 574
           SLRDRTKDILSVV ALLFGVGCGALT+ATMYLVWSL + RY    G              
Sbjct: 120 SLRDRTKDILSVVVALLFGVGCGALTAATMYLVWSLFSTRYNYHYGEFDDEDDEDEDEDV 179

Query: 575 XPKKMGYCKI 604
            PKKMGY KI
Sbjct: 180 SPKKMGYVKI 189


>ref|XP_002264862.1| PREDICTED: uncharacterized protein LOC100241008 [Vitis vinifera]
          Length = 186

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 69/184 (37%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
 Frame = +2

Query: 68  LLLIFSLFAIGVNGRPGVHFHPCKTLFISSFTISESFXXXXXXXXXXXXXXRFFTIFDFY 247
           L L+ + F +G    P     PCKTLFISS+++S                    TIF   
Sbjct: 9   LSLLSAAFLLGFLSDPAAA-RPCKTLFISSYSVSFHPNFPDQNNPNSAGTAGILTIFTEI 67

Query: 248 PTQQPLEIFVSRRPAFDSAYLLPRSIPTRRFEKPETHHPVV--PFDG---SFGGSSLRDR 412
               P       RP            P    +  E  HP+   P  G    F   SLRDR
Sbjct: 68  RQFNP-------RP------------PLTFVDAVEDQHPIERPPRFGLGLGFDSDSLRDR 108

Query: 413 TKDILSVVAALLFGVGCGALTSATMYLVWSLVTNRYVVRDGXXXXXXXXXXXXXXPKKMG 592
           TKD+LSVV ALLFGVGCGALT+ATMYL WSL +NR+   D               PKK+G
Sbjct: 109 TKDVLSVVVALLFGVGCGALTAATMYLGWSLFSNRHRYSD-FDYDDFEDDDVDMSPKKVG 167

Query: 593 YCKI 604
           Y +I
Sbjct: 168 YVRI 171


>ref|XP_003553139.1| PREDICTED: uncharacterized protein LOC100817673 [Glycine max]
          Length = 188

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 62/160 (38%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
 Frame = +2

Query: 131 PCKTLFISSFTISESFXXXXXXXXXXXXXXRFFTIFDFYPTQQPLEIFVSRRPAFDSAYL 310
           PC+T  ISS+    SF              R FT    Y T +P     + +P+      
Sbjct: 25  PCRTFIISSY----SFRNPNSNTFATITEIRSFT--PLYITDKP-----TGKPSSSYDLF 73

Query: 311 LPRSIPTRRFEKPETHHPVVP--FDGSFGGSSLRDRTKDILSVVAALLFGVGCGALTSAT 484
            P +       +PE  +P  P  F  ++  SSLRDRTKDILSV  ALLFGVGCGALT+AT
Sbjct: 74  FPHAT---HLPEPERVNPRAPLGFASAYDFSSLRDRTKDILSVALALLFGVGCGALTAAT 130

Query: 485 MYLVWSLVTNRYVVRDGXXXXXXXXXXXXXXPKKMGYCKI 604
           MYLVWS+ + R+                   PKK+GY KI
Sbjct: 131 MYLVWSVFSTRHPT--AAFDDFSSDEDEIESPKKLGYVKI 168


>emb|CBI31118.3| unnamed protein product [Vitis vinifera]
          Length = 184

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 68/184 (36%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
 Frame = +2

Query: 68  LLLIFSLFAIGVNGRPGVHFHPCKTLFISSFTISESFXXXXXXXXXXXXXXRFFTIFDFY 247
           L L+ + F +G    P     PCKTLFISS+++S                        F+
Sbjct: 19  LSLLSAAFLLGFLSDPAAA-RPCKTLFISSYSVS------------------------FH 53

Query: 248 PTQQPLEIFVSRRPAFDSAYLLPRSIPTRRFEKPETHHPVV--PFDG---SFGGSSLRDR 412
           P       F  +          PR  P    +  E  HP+   P  G    F   SLRDR
Sbjct: 54  PN------FPDQNNPNSIRQFNPRP-PLTFVDAVEDQHPIERPPRFGLGLGFDSDSLRDR 106

Query: 413 TKDILSVVAALLFGVGCGALTSATMYLVWSLVTNRYVVRDGXXXXXXXXXXXXXXPKKMG 592
           TKD+LSVV ALLFGVGCGALT+ATMYL WSL +NR+   D               PKK+G
Sbjct: 107 TKDVLSVVVALLFGVGCGALTAATMYLGWSLFSNRHRYSD-FDYDDFEDDDVDMSPKKVG 165

Query: 593 YCKI 604
           Y +I
Sbjct: 166 YVRI 169


>ref|XP_002305247.1| predicted protein [Populus trichocarpa] gi|118484364|gb|ABK94059.1|
           unknown [Populus trichocarpa]
           gi|222848211|gb|EEE85758.1| predicted protein [Populus
           trichocarpa]
          Length = 194

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 65/157 (41%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
 Frame = +2

Query: 74  LIFSLFAIGVNGRPGVHFHPCKTLFISSFTISESFXXXXXXXXXXXXXXRFFTIFDFYPT 253
           LIF+LF +  +        PCKTLFISS+++S                  FF + +   T
Sbjct: 6   LIFTLFILLSSLSFSCSARPCKTLFISSYSLS----IKPLNPNPNNPSSGFFIVTEIEET 61

Query: 254 QQPL--EIFVSRRPAFDSAYLLPRSIPTRRFEKPETHHPVVPFDGS---------FGG-- 394
                   F +RR        +P  IP   +EK +  H    F  +         FGG  
Sbjct: 62  STSTFHSNFFNRR-------FIP-FIPNNNYEKSQEIHDKKGFQETAQVGSVWPGFGGYD 113

Query: 395 -SSLRDRTKDILSVVAALLFGVGCGALTSATMYLVWS 502
            SSLRDRTKDILSVV ALLFGVGCGALT+ATMYLVWS
Sbjct: 114 LSSLRDRTKDILSVVVALLFGVGCGALTAATMYLVWS 150


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