BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002957
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|2...   359   1e-96
ref|XP_002454240.1| hypothetical protein SORBIDRAFT_04g027350 [S...   353   6e-95
ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vit...   352   2e-94
ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus ...   351   3e-94
ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1...   347   5e-93

>ref|XP_002301066.1| predicted protein [Populus trichocarpa] gi|222842792|gb|EEE80339.1|
            predicted protein [Populus trichocarpa]
          Length = 321

 Score =  359 bits (921), Expect = 1e-96
 Identities = 184/328 (56%), Positives = 233/328 (71%), Gaps = 5/328 (1%)
 Frame = +3

Query: 255  MEGGSELRPWDELIPDTLGLIFSNLPLEEILTVIPRVCKSWGKAVAGPYCWQEIDIERWS 434
            ME G E R WDELIPD LGLIF NL L+EILT++PRVCKSW +AV+GPYCWQEI+IE WS
Sbjct: 1    MEEGDEYRRWDELIPDALGLIFRNLSLQEILTMVPRVCKSWSRAVSGPYCWQEINIEEWS 60

Query: 435  TECGLEQIGPMIRMLITRSGGSVRKLNVSGIPTDDIFSFIADNAGSLQDLRVSRSEFSNA 614
            T C  + +  M++MLITRS GS+RKL VSG+  D  FSF+AD+AGSLQ LR+ RS+  ++
Sbjct: 61   TRCHPDHLDRMLQMLITRSCGSLRKLCVSGLHNDTNFSFLADHAGSLQTLRIPRSDIGDS 120

Query: 615  IVQEVAHKLSTITFLDLSCCLNIGAPALEAIGKHCKSLIALQRAMHPLTVEEKICQNDEA 794
            IV+++A +LST+TFLD+S C  I   ALEAIGKHCK L+ L R MHPL  E    Q+DEA
Sbjct: 121  IVEQIAGRLSTVTFLDVSYCNKISGRALEAIGKHCKLLVGLCRNMHPLDTEGLEAQDDEA 180

Query: 795  HAIATTMPKLKHLELSYMLVDTGAVHEILLNCPHLEYLDLRGCWNVKFDEDFLKEKFSGV 974
            +AIATTMPKLK LE++Y LV T ++ +IL +C +LE++DLRGCWNV  D  F KEKF  +
Sbjct: 181  YAIATTMPKLKRLEMAYHLVSTESLLQILSSCTNLEFMDLRGCWNVNLDNKFFKEKFQKL 240

Query: 975  KVLGPVV-----EGSDRYWEYYSDFSESESVLAWELLTGHLDGADYEVDSFDGDSFDEAW 1139
             VLGP+V     E +D + E  S++S+    LAW  L G  DG DY+    D +S+DE W
Sbjct: 241  TVLGPLVMEDYYEAND-WEEDCSEYSDDSDYLAWGFLAG--DGGDYD----DDESYDEMW 293

Query: 1140 DDEQRXXXXXXRFYEGFNEAVEHAWPPS 1223
            DDE R      RFYEG +  + + WPPS
Sbjct: 294  DDEGRLEELELRFYEGADAGL-YGWPPS 320


>ref|XP_002454240.1| hypothetical protein SORBIDRAFT_04g027350 [Sorghum bicolor]
            gi|241934071|gb|EES07216.1| hypothetical protein
            SORBIDRAFT_04g027350 [Sorghum bicolor]
          Length = 365

 Score =  353 bits (906), Expect = 6e-95
 Identities = 181/330 (54%), Positives = 233/330 (70%), Gaps = 5/330 (1%)
 Frame = +3

Query: 249  G*MEGGSELRPWDELIPDTLGLIFSNLPLEEILTVIPRVCKSWGKAVAGPYCWQEIDIER 428
            G  E G E R W+EL+PD LGLIF NLPL+E+LTV+PRVCKSWG+ VAGPYCWQEIDIE 
Sbjct: 45   GECEDGKEYRCWEELLPDALGLIFRNLPLQEMLTVVPRVCKSWGRVVAGPYCWQEIDIEE 104

Query: 429  WSTECGL-EQIGPMIRMLITRSGGSVRKLNVSGIPTDDIFSFIADNAGSLQDLRVSRSEF 605
            WS +    +QIG M+ +LI RSGGS R+++VSG+P D +FSFI DNA +L+ L + RSE 
Sbjct: 105  WSQQQSKPDQIGRMVELLIGRSGGSCRRISVSGLPCDPLFSFIGDNARALRTLEIPRSEI 164

Query: 606  SNAIVQEVAHKLSTITFLDLSCCLNIGAPALEAIGKHCKSLIALQRAMHPLTVEEKICQN 785
            S++IV+ VA +LS +TFLD+S C  IGA ALEA GKHCKSL+ L+R MHP+ + +K+CQ+
Sbjct: 165  SDSIVETVAPRLSNVTFLDISSCTKIGARALEAFGKHCKSLVGLRRVMHPIDLVDKVCQH 224

Query: 786  DEAHAIATTMPKLKHLELSYMLVDTGAVHEILLNCPHLEYLDLRGCWNVKFDEDFLKEKF 965
            DEAHAIA +MPKL+HLE+ YML+ T AV EIL  C  L++LDLRGCW V  D+ FL+E+ 
Sbjct: 225  DEAHAIACSMPKLRHLEMGYMLIATEAVLEILGQCRDLKFLDLRGCWTV--DDKFLRERH 282

Query: 966  SGVKVLGPVVEG--SDRYWEYYSDFSESESVLAWELLTGHLDGADYEVDSFDGDSFDEAW 1139
             G++VLGP V+    + YWE  SD+S+  S+ +WE     +D   Y V S D    +  W
Sbjct: 283  PGLRVLGPRVDDCYENSYWEECSDYSDDSSIYSWEF----MDDDYYAVGSDD----EAIW 334

Query: 1140 DDEQRXXXXXXRFY-EGFNEA-VEHAWPPS 1223
            DD Q       RFY  GF+E+     WPPS
Sbjct: 335  DDGQGLENLEVRFYGGGFSESFAGFDWPPS 364


>ref|XP_002269291.1| PREDICTED: F-box protein FBW2 isoform 1 [Vitis vinifera]
            gi|359496684|ref|XP_003635300.1| PREDICTED: F-box protein
            FBW2 isoform 2 [Vitis vinifera]
            gi|296085646|emb|CBI29445.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  352 bits (902), Expect = 2e-94
 Identities = 190/328 (57%), Positives = 227/328 (69%), Gaps = 5/328 (1%)
 Frame = +3

Query: 255  MEGGSELRPWDELIPDTLGLIFSNLPLEEILTVIPRVCKSWGKAVAGPYCWQEIDIERWS 434
            ME G E R WDELIPD LGLIFSNL L+EILTVIPRVCKSW K V GPYCWQEIDI  WS
Sbjct: 1    MEEGCEFRSWDELIPDALGLIFSNLSLQEILTVIPRVCKSWRKTVMGPYCWQEIDIVEWS 60

Query: 435  TECGLEQIGPMIRMLITRSGGSVRKLNVSGIPTDDIFSFIADNAGSLQDLRVSRSEFSNA 614
                 E +  M+ ML+TRS GS RKL VSG+PTD  FSF+AD+A SLQ LR+ RSE S+ 
Sbjct: 61   QRSSPENLDRMLEMLMTRSAGSHRKLCVSGLPTDASFSFVADHAKSLQTLRLPRSEISDP 120

Query: 615  IVQEVAHKLSTITFLDLSCCLNIGAPALEAIGKHCKSLIALQRAMHPLTVEEKICQNDEA 794
            IV+EVA KLSTITFLD+S C  +GAPALEAIGKHCK L  L+R MHPL + +K+ Q+DEA
Sbjct: 121  IVEEVAWKLSTITFLDVSYCRKMGAPALEAIGKHCKFLTGLRRIMHPLEIIDKLTQDDEA 180

Query: 795  HAIATTMPKLKHLELSYMLVDTGAVHEILLNCPHLEYLDLRGCWNVKFDEDFLKEKFSGV 974
             AIA TMPKLKHLE++Y+LV T  V +IL +C  LE LD+RGCWNVK DE  +K KFSG+
Sbjct: 181  LAIAATMPKLKHLEIAYLLVSTEPVLKILASCCELELLDVRGCWNVKLDEKLIK-KFSGL 239

Query: 975  KVLGPVV----EGSDRYWEYYSDFSESESVLAWELLTGHLDGADYEVDSFDGDSFDEAWD 1142
            KV+GP+V    EG+   W+  S +S S   LAW+ + G +D  D        D    AW+
Sbjct: 240  KVVGPLVIDCYEGNG--WDDCSAYSGSSGYLAWDFVAGEMDYYD--------DELYAAWE 289

Query: 1143 DEQRXXXXXXRFYEGFN-EAVEHAWPPS 1223
            DE        RFY+GF+ +     WP S
Sbjct: 290  DES-MDDLELRFYDGFDADNAGFDWPQS 316


>ref|XP_002513950.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223547036|gb|EEF48533.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 329

 Score =  351 bits (900), Expect = 3e-94
 Identities = 184/331 (55%), Positives = 236/331 (71%), Gaps = 8/331 (2%)
 Frame = +3

Query: 255  MEGGSELRPWDELIPDTLGLIFSNLPLEEILTVIPRVCKSWGKAVAGPYCWQEIDIERWS 434
            ME GSE R WDELIPD LGLIF NL L+EILTV+PRVCKSW +AV+GPYCWQEIDIE WS
Sbjct: 1    MEDGSEYRCWDELIPDALGLIFRNLSLQEILTVVPRVCKSWNRAVSGPYCWQEIDIEEWS 60

Query: 435  TECGLEQIGPMIRMLITRSGGSVRKLNVSGIPTDDIFSFIADNAGSLQDLRVSRSEFSNA 614
             +     I  M+RMLI RS GS+RKL VSGIP+D IF F+AD+AGSLQ LR  RSE S++
Sbjct: 61   NKRQPHHIDRMLRMLIARSCGSLRKLCVSGIPSDAIFPFLADHAGSLQTLRTPRSEISDS 120

Query: 615  IVQEVAHKLSTITFLDLSCCLNIGAPALEAIGKHCKSLIALQRAMHPLTVEEKICQNDEA 794
            IV+++A +LSTITFLD+S C  I A ALEAIGK+CK L  L R +   +   ++ Q+DEA
Sbjct: 121  IVEQIAGRLSTITFLDVSHCNEISARALEAIGKNCKLLSGLCRNVELSSSANQLLQDDEA 180

Query: 795  HAIATTMPKLKHLELSY-MLVDTGAVHEILLNCPHLEYLDLRGCWNVKFDEDFLKEKFSG 971
             AIA+TMPKLKHLE++Y +L++T +V +IL +CP LE+L+L GCW+VKFD +FL+EKF  
Sbjct: 181  QAIASTMPKLKHLEVAYHLLINTESVLKILSSCPELEFLNLTGCWDVKFDRNFLQEKFPK 240

Query: 972  VKVLGP-------VVEGSDRYWEYYSDFSESESVLAWELLTGHLDGADYEVDSFDGDSFD 1130
            +KV+GP       + +  D   EY   +S++    AWE+ +G ++  DY+ D  D DS+D
Sbjct: 241  LKVVGPHLLDYYDMNDWGDYCSEYSDAYSDASEYFAWEIFSGDME--DYD-DDDDDDSYD 297

Query: 1131 EAWDDEQRXXXXXXRFYEGFNEAVEHAWPPS 1223
              WDDEQR      RFYEG  +A  + WP S
Sbjct: 298  GMWDDEQRLEELELRFYEGNEDAGLYGWPLS 328


>ref|XP_003522785.1| PREDICTED: F-box protein FBW2-like isoform 1 [Glycine max]
            gi|356508075|ref|XP_003522786.1| PREDICTED: F-box protein
            FBW2-like isoform 2 [Glycine max]
          Length = 321

 Score =  347 bits (890), Expect = 5e-93
 Identities = 179/327 (54%), Positives = 227/327 (69%), Gaps = 4/327 (1%)
 Frame = +3

Query: 255  MEGGSELRPWDELIPDTLGLIFSNLPLEEILTVIPRVCKSWGKAVAGPYCWQEIDIERWS 434
            ME   E R W ELIPD LG+IF+NL L+E +TVIPRVCKSW  AV GPYCWQEIDI+ WS
Sbjct: 1    MEEACEFRSWAELIPDALGVIFTNLSLQERVTVIPRVCKSWANAVTGPYCWQEIDIKDWS 60

Query: 435  TECGLEQIGPMIRMLITRSGGSVRKLNVSGIPTDDIFSFIADNAGSLQDLRVSRSEFSNA 614
              C  +Q+  ++ MLITRS GS+RKL+VSG+ T+ IF+FIA+NA SL  LR+ RS  +++
Sbjct: 61   NRCQPDQLDRLLEMLITRSSGSLRKLSVSGLQTESIFTFIAENACSLHTLRLPRSSMNDS 120

Query: 615  IVQEVAHKLSTITFLDLSCCLNIGAPALEAIGKHCKSLIALQRAMHPLTVEEKICQNDEA 794
            IV+++A +LS I+FLD+S C+ IG  ALE IGK+CK L  L R MHPL    K  Q+DEA
Sbjct: 121  IVEQIAGRLSMISFLDVSYCIKIGPYALEMIGKNCKLLEGLCRNMHPLDTASKPFQDDEA 180

Query: 795  HAIATTMPKLKHLELSYMLVDTGAVHEILLNCPHLEYLDLRGCWNVKFDEDFLKEKFSGV 974
            +AIA+TMPKLKHLE++Y L+ T  V +IL NCP LE+LD RGCW V  D  FLK+KF  +
Sbjct: 181  YAIASTMPKLKHLEMAYHLISTSGVLQILANCPKLEFLDQRGCWGVTLDHMFLKQKFPKL 240

Query: 975  KVLGPVVEGSDRY----WEYYSDFSESESVLAWELLTGHLDGADYEVDSFDGDSFDEAWD 1142
            KVLGP V   D Y    W+ +SD S+S   LAW+ + G ++  +Y VD  D DS+D  WD
Sbjct: 241  KVLGPFV--LDTYESDGWDDFSDVSDSSEYLAWDFVAGGME--EYYVD--DSDSYDGMWD 294

Query: 1143 DEQRXXXXXXRFYEGFNEAVEHAWPPS 1223
            DE R       FYEG  +A  + WPPS
Sbjct: 295  DEGRLDELQFGFYEGIEDAGMY-WPPS 320