BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002951
         (1826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279715.1| PREDICTED: probable 26S proteasome non-ATPas...   738   0.0  
sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome no...   736   0.0  
ref|XP_002521275.1| 26S proteasome regulatory subunit S3, putati...   726   0.0  
ref|XP_003527532.1| PREDICTED: probable 26S proteasome non-ATPas...   725   0.0  
ref|XP_003523322.1| PREDICTED: probable 26S proteasome non-ATPas...   724   0.0  

>ref|XP_002279715.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3
            [Vitis vinifera]
          Length = 487

 Score =  738 bits (1904), Expect = 0.0
 Identities = 379/456 (83%), Positives = 405/456 (88%)
 Frame = -2

Query: 1705 MTQDVEMKEXXXXXXXXXXXXXXTLQNLKEIASHIETGAYDKEVRRIARAVRLTIALRRK 1526
            MTQDVEMKE              TLQ+LKEIAS IE+ AY +EVRRI RA+RLT+ LRRK
Sbjct: 1    MTQDVEMKELPAPSNSVTSTTPSTLQHLKEIASLIESSAYAREVRRIVRAIRLTMILRRK 60

Query: 1525 LKASVLSAFLNYALIPGSEAHTRLSSYLPKEDEHDMEVDTATSATPALVKQSLPELEIYC 1346
            LKA+VLS FLNYAL PGSE HTRLSSYLPKEDEHDMEVDTATSAT    K  LPELEIYC
Sbjct: 61   LKATVLSGFLNYALNPGSEVHTRLSSYLPKEDEHDMEVDTATSATQTPAKHPLPELEIYC 120

Query: 1345 YLLVLIFLIDQKRFGEAKACSSASIARLRNMNRRTVDVLASRLYFYYSLSYEQTGDLAEI 1166
            YLLVLIFLIDQK++ EAKACS+ASI RL+N+NRRT+DVLASRLY YYSLSYE TGDLAEI
Sbjct: 121  YLLVLIFLIDQKKYKEAKACSAASITRLKNLNRRTIDVLASRLYSYYSLSYELTGDLAEI 180

Query: 1165 RGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXYDQAEKLRSKAPRFEAHSNQQFCR 986
            RGNLLALHRIATLRHDELGQET              YDQAEKLRSKAPRFEAHSNQQFCR
Sbjct: 181  RGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCR 240

Query: 985  YLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAVIVRLLLGEIPERTVF 806
            YLFYLGKIRTIQLEYTDAKESLLQAARKAPV+ALGFRVQCNKWAVIVRLLLGEIPERTVF
Sbjct: 241  YLFYLGKIRTIQLEYTDAKESLLQAARKAPVSALGFRVQCNKWAVIVRLLLGEIPERTVF 300

Query: 805  MQKGMKKALRPYFELTNAVRVGDLELFRTVADKFATTFNSDRTHNLIVRLRHNVIRTGLR 626
            MQKGM+KALRPYFELTNAVR+GDLELF++VA+KF+TTF+SDRTHNLIVRLRHNVIRTGLR
Sbjct: 301  MQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSTTFSSDRTHNLIVRLRHNVIRTGLR 360

Query: 625  NISISYSRISLKDVAHKLRFNSENPVADAESIVSKAIRDGAIDATIDHANGWMVSKETGD 446
            NISISYSRISL DVA KLR +S NP+ADAESIV+KAIRDGAIDAT+DHANGWMVSKETGD
Sbjct: 361  NISISYSRISLADVAQKLRLDSANPIADAESIVAKAIRDGAIDATLDHANGWMVSKETGD 420

Query: 445  VYSTNEPQVAFNSRIAFCLNMHNEAVRALRFPPNSH 338
            +YSTNEPQ AFNSRIAFCLNMHN+AVRALRFPPNSH
Sbjct: 421  IYSTNEPQFAFNSRIAFCLNMHNDAVRALRFPPNSH 456


>sp|Q06364.2|PSMD3_DAUCA RecName: Full=Probable 26S proteasome non-ATPase regulatory subunit
            3; Short=26S proteasome subunit S3; AltName: Full=26S
            proteasome regulatory subunit RPN3; AltName: Full=Nuclear
            antigen 21D7
          Length = 489

 Score =  736 bits (1899), Expect = 0.0
 Identities = 382/458 (83%), Positives = 404/458 (88%), Gaps = 2/458 (0%)
 Frame = -2

Query: 1705 MTQDVEMKEXXXXXXXXXXXXXXT--LQNLKEIASHIETGAYDKEVRRIARAVRLTIALR 1532
            MTQDVEMKE                 LQ+LKEIAS IE+GAY +EVRRI RAVRLTIALR
Sbjct: 1    MTQDVEMKEVPAPAPSNSVTAATPSTLQHLKEIASLIESGAYAREVRRILRAVRLTIALR 60

Query: 1531 RKLKASVLSAFLNYALIPGSEAHTRLSSYLPKEDEHDMEVDTATSATPALVKQSLPELEI 1352
            +KL ASV++AFLN++L+PGSE H RL+SYLPKEDEHDMEVDTA SAT  L K SLPELEI
Sbjct: 61   KKLNASVVNAFLNFSLVPGSEVHARLASYLPKEDEHDMEVDTAMSATTTLAKHSLPELEI 120

Query: 1351 YCYLLVLIFLIDQKRFGEAKACSSASIARLRNMNRRTVDVLASRLYFYYSLSYEQTGDLA 1172
            YCYLLVLIFLIDQK++ EAKACSSASIAR++N+NRRTV+VLASRLYFYYSLSYE TGDLA
Sbjct: 121  YCYLLVLIFLIDQKKYSEAKACSSASIARVKNLNRRTVEVLASRLYFYYSLSYELTGDLA 180

Query: 1171 EIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXYDQAEKLRSKAPRFEAHSNQQF 992
            EIRGNLLALHRIATLRHDELGQET              YDQAEKLRSKAPRFEAHSNQQF
Sbjct: 181  EIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQF 240

Query: 991  CRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAVIVRLLLGEIPERT 812
            CRYLFYLGKIRTIQLEYTDAKES LQAARKAPVAALGFRVQCNKWAVIVRLLLGEIPERT
Sbjct: 241  CRYLFYLGKIRTIQLEYTDAKESXLQAARKAPVAALGFRVQCNKWAVIVRLLLGEIPERT 300

Query: 811  VFMQKGMKKALRPYFELTNAVRVGDLELFRTVADKFATTFNSDRTHNLIVRLRHNVIRTG 632
            VFMQKGM+KALRPYF LTNAVR+GDLELFR VADKFA+TF +DRTHNLIVRLRHNVIRTG
Sbjct: 301  VFMQKGMEKALRPYFXLTNAVRIGDLELFRXVADKFASTFTADRTHNLIVRLRHNVIRTG 360

Query: 631  LRNISISYSRISLKDVAHKLRFNSENPVADAESIVSKAIRDGAIDATIDHANGWMVSKET 452
            LRNISISYSRISL DVA KLR +S NPVADAESIVSKAIRDGAIDATIDHANGWMVSKET
Sbjct: 361  LRNISISYSRISLVDVARKLRLDSPNPVADAESIVSKAIRDGAIDATIDHANGWMVSKET 420

Query: 451  GDVYSTNEPQVAFNSRIAFCLNMHNEAVRALRFPPNSH 338
            GD+YSTNEPQ AFNSRIAFCLNMHNEAVRALRFP NSH
Sbjct: 421  GDIYSTNEPQAAFNSRIAFCLNMHNEAVRALRFPANSH 458


>ref|XP_002521275.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
            gi|223539543|gb|EEF41131.1| 26S proteasome regulatory
            subunit S3, putative [Ricinus communis]
          Length = 491

 Score =  726 bits (1873), Expect = 0.0
 Identities = 374/460 (81%), Positives = 406/460 (88%), Gaps = 4/460 (0%)
 Frame = -2

Query: 1705 MTQDVEMKEXXXXXXXXXXXXXXT----LQNLKEIASHIETGAYDKEVRRIARAVRLTIA 1538
            MTQDVEMKE              +    LQ+LKEIAS IETGAY +EVRRI RAVRLT+A
Sbjct: 1    MTQDVEMKEVPAAAAAPSNSTTSSSPSTLQHLKEIASLIETGAYAREVRRIVRAVRLTMA 60

Query: 1537 LRRKLKASVLSAFLNYALIPGSEAHTRLSSYLPKEDEHDMEVDTATSATPALVKQSLPEL 1358
            LRRKLKA +LSAFLN  L PGS+ +TRLSS+LPKED+H+MEVDTATS T A  K  LPEL
Sbjct: 61   LRRKLKAQLLSAFLNSILTPGSDPYTRLSSFLPKEDDHEMEVDTATSVTQAPAKHPLPEL 120

Query: 1357 EIYCYLLVLIFLIDQKRFGEAKACSSASIARLRNMNRRTVDVLASRLYFYYSLSYEQTGD 1178
            E+YCYLLVLI+LIDQK++ EAKACS+A IARL+N+NRRTVDVLASRLYFYYSLSYE TGD
Sbjct: 121  EMYCYLLVLIYLIDQKKYNEAKACSTACIARLKNLNRRTVDVLASRLYFYYSLSYELTGD 180

Query: 1177 LAEIRGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXYDQAEKLRSKAPRFEAHSNQ 998
            LAEIRGNLLALHRIATLRHDELGQET              YDQAEKLRSKAPRFEAHSNQ
Sbjct: 181  LAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQ 240

Query: 997  QFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAVIVRLLLGEIPE 818
            QFCRYLFYLGKIRTIQLEYTDAKESLLQAARK+PVAALGFRVQCNKWA+IVRLLLGEIPE
Sbjct: 241  QFCRYLFYLGKIRTIQLEYTDAKESLLQAARKSPVAALGFRVQCNKWAIIVRLLLGEIPE 300

Query: 817  RTVFMQKGMKKALRPYFELTNAVRVGDLELFRTVADKFATTFNSDRTHNLIVRLRHNVIR 638
            RTVFMQKGM+KALRPYFELTNAVR+GDLELF++VA+KF+T F++DRTHNLIVRLRHNVIR
Sbjct: 301  RTVFMQKGMEKALRPYFELTNAVRIGDLELFKSVAEKFSTIFSADRTHNLIVRLRHNVIR 360

Query: 637  TGLRNISISYSRISLKDVAHKLRFNSENPVADAESIVSKAIRDGAIDATIDHANGWMVSK 458
            TGLRNISISYSRISL DVA KLR +S NPVADAESIV+KAIRDGAIDAT+DHANGWMVSK
Sbjct: 361  TGLRNISISYSRISLADVAKKLRLDSANPVADAESIVAKAIRDGAIDATLDHANGWMVSK 420

Query: 457  ETGDVYSTNEPQVAFNSRIAFCLNMHNEAVRALRFPPNSH 338
            ETGD+YSTNEPQ+AFNSRIAFCLNMHNEAVRALRFPPNSH
Sbjct: 421  ETGDIYSTNEPQIAFNSRIAFCLNMHNEAVRALRFPPNSH 460


>ref|XP_003527532.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
            3-like [Glycine max]
          Length = 487

 Score =  725 bits (1871), Expect = 0.0
 Identities = 371/456 (81%), Positives = 400/456 (87%)
 Frame = -2

Query: 1705 MTQDVEMKEXXXXXXXXXXXXXXTLQNLKEIASHIETGAYDKEVRRIARAVRLTIALRRK 1526
            MTQD+EMK+              TLQ+LKEIAS IETG+Y KEVRRIARAVRLTIALRRK
Sbjct: 1    MTQDLEMKDRSTPSNSVSSPAPSTLQHLKEIASLIETGSYSKEVRRIARAVRLTIALRRK 60

Query: 1525 LKASVLSAFLNYALIPGSEAHTRLSSYLPKEDEHDMEVDTATSATPALVKQSLPELEIYC 1346
            L AS +S+FL++ L PGSE H +LS+YLPK+D+H+MEVD ATSA     K  LPELEIYC
Sbjct: 61   LTASAISSFLDHVLTPGSEVHAKLSAYLPKDDDHEMEVDAATSAIQTPAKHLLPELEIYC 120

Query: 1345 YLLVLIFLIDQKRFGEAKACSSASIARLRNMNRRTVDVLASRLYFYYSLSYEQTGDLAEI 1166
            YLLVL+FLIDQK++ EAKACSSASI  L+N+NRRTVDV+ASRLYFYYS SYE  GDLAEI
Sbjct: 121  YLLVLLFLIDQKKYSEAKACSSASIVWLKNINRRTVDVIASRLYFYYSYSYELMGDLAEI 180

Query: 1165 RGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXYDQAEKLRSKAPRFEAHSNQQFCR 986
            RGNLLALHRIATLRHDELGQET              YDQAEKLRSKAPRFEAHSNQQFCR
Sbjct: 181  RGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCR 240

Query: 985  YLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAVIVRLLLGEIPERTVF 806
            YLFYLGKIRTIQLEYTDAKESLLQAARKAPVAA GFR+QCNKWAVIVRLLLGEIPERTVF
Sbjct: 241  YLFYLGKIRTIQLEYTDAKESLLQAARKAPVAARGFRIQCNKWAVIVRLLLGEIPERTVF 300

Query: 805  MQKGMKKALRPYFELTNAVRVGDLELFRTVADKFATTFNSDRTHNLIVRLRHNVIRTGLR 626
            MQKGM+KALRPYFELTNAVR+GDLELFR +ADKFATTFN+DRTHNLIVRLRHNVIRTGLR
Sbjct: 301  MQKGMEKALRPYFELTNAVRIGDLELFRNIADKFATTFNADRTHNLIVRLRHNVIRTGLR 360

Query: 625  NISISYSRISLKDVAHKLRFNSENPVADAESIVSKAIRDGAIDATIDHANGWMVSKETGD 446
            NISISYSRISL DVA KLR NS +PVADAESIVSKAIRDGAIDAT+DHANGWMVSKETGD
Sbjct: 361  NISISYSRISLADVAKKLRLNSASPVADAESIVSKAIRDGAIDATLDHANGWMVSKETGD 420

Query: 445  VYSTNEPQVAFNSRIAFCLNMHNEAVRALRFPPNSH 338
            +YSTNEPQ+AFNSRIAFCLNMHNEAVRALRFPPN+H
Sbjct: 421  IYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNTH 456


>ref|XP_003523322.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit
            3-like [Glycine max]
          Length = 487

 Score =  724 bits (1870), Expect = 0.0
 Identities = 372/456 (81%), Positives = 397/456 (87%)
 Frame = -2

Query: 1705 MTQDVEMKEXXXXXXXXXXXXXXTLQNLKEIASHIETGAYDKEVRRIARAVRLTIALRRK 1526
            MTQD+EM++              TLQ+LKEIAS IETG+Y KEVRRIARAVRLTIALRRK
Sbjct: 1    MTQDLEMRDRSTPSNSVSLPAPSTLQHLKEIASLIETGSYSKEVRRIARAVRLTIALRRK 60

Query: 1525 LKASVLSAFLNYALIPGSEAHTRLSSYLPKEDEHDMEVDTATSATPALVKQSLPELEIYC 1346
            L AS +S+FL+  L PGSE H +LS+YLPKED+H+MEVD ATSA     K  LPELEIYC
Sbjct: 61   LTASAISSFLDLVLTPGSEVHAKLSAYLPKEDDHEMEVDAATSAIQTPAKHLLPELEIYC 120

Query: 1345 YLLVLIFLIDQKRFGEAKACSSASIARLRNMNRRTVDVLASRLYFYYSLSYEQTGDLAEI 1166
            YLLVL+FLIDQK++ EAKACSSASI  L+N NRRTVDV+ASRLYFYYS SYE TGDLAEI
Sbjct: 121  YLLVLLFLIDQKKYNEAKACSSASIVWLKNTNRRTVDVIASRLYFYYSYSYELTGDLAEI 180

Query: 1165 RGNLLALHRIATLRHDELGQETXXXXXXXXXXXXXXYDQAEKLRSKAPRFEAHSNQQFCR 986
            RGNLLALHR ATLRHDELGQET              YDQAEKLRSKAPRFEAHSNQQFCR
Sbjct: 181  RGNLLALHRFATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCR 240

Query: 985  YLFYLGKIRTIQLEYTDAKESLLQAARKAPVAALGFRVQCNKWAVIVRLLLGEIPERTVF 806
            YLFYLGKIRTIQLEYTDAKESLLQAARKAPVAA GFR+QCNKWAVIVRLLLGEIPERTVF
Sbjct: 241  YLFYLGKIRTIQLEYTDAKESLLQAARKAPVAARGFRIQCNKWAVIVRLLLGEIPERTVF 300

Query: 805  MQKGMKKALRPYFELTNAVRVGDLELFRTVADKFATTFNSDRTHNLIVRLRHNVIRTGLR 626
            MQKGM+KALRPYFELTNAVR+GDLELFR +ADKFATTFN+DRTHNLIVRLRHNVIRTGLR
Sbjct: 301  MQKGMEKALRPYFELTNAVRIGDLELFRNIADKFATTFNADRTHNLIVRLRHNVIRTGLR 360

Query: 625  NISISYSRISLKDVAHKLRFNSENPVADAESIVSKAIRDGAIDATIDHANGWMVSKETGD 446
            NISISYSRISL DVA KLR NS NPVADAESIVSKAIRDGAIDAT+DHANGWMVSKETGD
Sbjct: 361  NISISYSRISLADVAKKLRLNSANPVADAESIVSKAIRDGAIDATLDHANGWMVSKETGD 420

Query: 445  VYSTNEPQVAFNSRIAFCLNMHNEAVRALRFPPNSH 338
            +YSTNEPQ AFNSRIAFCLNMHNEAVRALRFPPN+H
Sbjct: 421  IYSTNEPQSAFNSRIAFCLNMHNEAVRALRFPPNTH 456