BLASTX nr result

ID: Cimicifuga21_contig00002878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002878
         (1481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96297.1| unknown [Populus trichocarpa x Populus deltoides]       75   6e-11
ref|XP_004169964.1| PREDICTED: uncharacterized protein LOC101228...    74   1e-10
ref|XP_004142242.1| PREDICTED: uncharacterized LOC101204258 [Cuc...    74   1e-10
ref|XP_002513445.1| oxidoreductase, putative [Ricinus communis] ...    72   3e-10
ref|XP_002285606.1| PREDICTED: uncharacterized protein YMR315W-l...    72   4e-10

>gb|ABK96297.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 363

 Score = 74.7 bits (182), Expect = 6e-11
 Identities = 52/120 (43%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
 Frame = -1

Query: 806 SELVEMYTKVSVLFVCRFSICN*ENNKARTVVELARNFFPNVLCKWGEVGLDEIIQDASI 627
           ++ +    ++S LFV + SI +     AR  VE+A+  FP V CKWG+ GLDEIIQD SI
Sbjct: 19  TQYIPRLAEISHLFVLK-SIWSRSEESAREAVEVAKEHFPGVECKWGDKGLDEIIQDESI 77

Query: 626 LGVAVVLAGQTQVLSSIKSYV*YWLIVKANK--LCV*LTLSS*QGSSYTCSTLKSICMSN 453
           LGVAVVLA Q QV  S+K       ++KA K  L      SS      + S+ KSIC ++
Sbjct: 78  LGVAVVLAAQYQVDMSLK-------LLKAGKHVLQEKPAASSISEIETSLSSYKSICANS 130


>ref|XP_004169964.1| PREDICTED: uncharacterized protein LOC101228167 [Cucumis sativus]
          Length = 110

 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -1

Query: 725 ARTVVELARNFFPNVLCKWGEVGLDEIIQDASILGVAVVLAGQTQVLSSIK 573
           A+  V++ARN+FP V CKWG+ GLD+IIQD+SILGVAVVLAGQ QV  S++
Sbjct: 44  AKGAVDIARNYFPTVECKWGDAGLDDIIQDSSILGVAVVLAGQAQVDMSLR 94


>ref|XP_004142242.1| PREDICTED: uncharacterized LOC101204258 [Cucumis sativus]
          Length = 220

 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = -1

Query: 725 ARTVVELARNFFPNVLCKWGEVGLDEIIQDASILGVAVVLAGQTQVLSSIK 573
           A+  V++ARN+FP V CKWG+ GLD+IIQD+SILGVAVVLAGQ QV  S++
Sbjct: 44  AKGAVDIARNYFPTVECKWGDAGLDDIIQDSSILGVAVVLAGQAQVDMSLR 94


>ref|XP_002513445.1| oxidoreductase, putative [Ricinus communis]
           gi|223547353|gb|EEF48848.1| oxidoreductase, putative
           [Ricinus communis]
          Length = 359

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 39/78 (50%), Positives = 52/78 (66%)
 Frame = -1

Query: 806 SELVEMYTKVSVLFVCRFSICN*ENNKARTVVELARNFFPNVLCKWGEVGLDEIIQDASI 627
           ++ +    ++S LFV + ++ +     A+  VE+AR  FP V CKWG+ GLDEII D SI
Sbjct: 18  TQYIPRLAEISNLFVLK-AVWSRSEESAQGAVEIARKHFPGVECKWGDEGLDEIIHDHSI 76

Query: 626 LGVAVVLAGQTQVLSSIK 573
           L VAVVLAGQTQV  S+K
Sbjct: 77  LAVAVVLAGQTQVDMSLK 94


>ref|XP_002285606.1| PREDICTED: uncharacterized protein YMR315W-like [Vitis vinifera]
          Length = 359

 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 40/78 (51%), Positives = 52/78 (66%)
 Frame = -1

Query: 806 SELVEMYTKVSVLFVCRFSICN*ENNKARTVVELARNFFPNVLCKWGEVGLDEIIQDASI 627
           ++ +    ++S LFV + +I +     A   VELAR  FP+V CKWGE GLDEII D+SI
Sbjct: 18  TQYIPRLAEISHLFVLK-AIWSRSQESANITVELARKNFPDVECKWGEDGLDEIINDSSI 76

Query: 626 LGVAVVLAGQTQVLSSIK 573
            GVAVVLAGQ QV  S++
Sbjct: 77  TGVAVVLAGQFQVEMSLR 94


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