BLASTX nr result

ID: Cimicifuga21_contig00002875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002875
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACE63263.1| histidine kinase 3B [Populus trichocarpa]              340   3e-91
ref|XP_002304678.1| histidine kinase cytokinin receptor [Populus...   340   3e-91
ref|XP_002297846.1| histidine kinase cytokinin receptor [Populus...   334   2e-89
gb|ACE63261.1| histidine kinase 3 [Betula pendula]                    321   2e-85
ref|XP_002276961.1| PREDICTED: histidine kinase 3 [Vitis vinifer...   317   4e-84

>gb|ACE63263.1| histidine kinase 3B [Populus trichocarpa]
          Length = 1019

 Score =  340 bits (873), Expect = 3e-91
 Identities = 166/236 (70%), Positives = 195/236 (82%), Gaps = 7/236 (2%)
 Frame = -3

Query: 688 MIYIYVFDIGVKVVGHLPLMLCWLILSMISMNWLINGGIME-KIG--GDRGKRWLKWVEN 518
           M  ++VF  G+KV GHL  MLC  I+S+ISMNW INGGI+E K G  GD GK WLK +E 
Sbjct: 1   MSLLHVFGFGLKV-GHLLWMLCCWIVSVISMNWFINGGILETKAGLLGDGGKMWLKCLEK 59

Query: 517 VSGIGRKIQHQYYQYIGSKKVGKAWWRKVLVSWILGWVLASMWIFWYLNSQMFEKRKETL 338
           VSG   KI H YYQYIGSK++ K WWRK+LV+WI+GW+  S+WIFWY++SQ FEKRKETL
Sbjct: 60  VSGNSCKIHHLYYQYIGSKRIRKTWWRKLLVAWIVGWITVSVWIFWYMSSQAFEKRKETL 119

Query: 337 GSMCDERARMLQDQFNVSMNHVQALSILIATFHHSKSPSSIDQTTFARYTDRTTFERPLT 158
            SMCDERARMLQDQFNVSMNHVQA+SILI+TFHH K+PS+IDQ TFARYT+RT FERPLT
Sbjct: 120 ASMCDERARMLQDQFNVSMNHVQAMSILISTFHHGKNPSAIDQRTFARYTERTAFERPLT 179

Query: 157 SGVAYAVKVLHSERDEFQKQQGWTIKRMDKLEQTPVQD----AEVLEPSPVQEEYA 2
           SGVAYAV+V+HSER++F+ QQGWTIKRMD  EQ+PVQ     A+ LEPSP+QEEYA
Sbjct: 180 SGVAYAVRVMHSEREQFENQQGWTIKRMDTFEQSPVQKDDNVAKALEPSPIQEEYA 235


>ref|XP_002304678.1| histidine kinase cytokinin receptor [Populus trichocarpa]
           gi|222842110|gb|EEE79657.1| histidine kinase cytokinin
           receptor [Populus trichocarpa]
          Length = 1029

 Score =  340 bits (873), Expect = 3e-91
 Identities = 166/236 (70%), Positives = 195/236 (82%), Gaps = 7/236 (2%)
 Frame = -3

Query: 688 MIYIYVFDIGVKVVGHLPLMLCWLILSMISMNWLINGGIME-KIG--GDRGKRWLKWVEN 518
           M  ++VF  G+KV GHL  MLC  I+S+ISMNW INGGI+E K G  GD GK WLK +E 
Sbjct: 1   MSLLHVFGFGLKV-GHLLWMLCCWIVSVISMNWFINGGILETKAGLLGDGGKMWLKCLEK 59

Query: 517 VSGIGRKIQHQYYQYIGSKKVGKAWWRKVLVSWILGWVLASMWIFWYLNSQMFEKRKETL 338
           VSG   KI H YYQYIGSK++ K WWRK+LV+WI+GW+  S+WIFWY++SQ FEKRKETL
Sbjct: 60  VSGNSCKIHHLYYQYIGSKRIRKTWWRKLLVAWIVGWITVSVWIFWYMSSQAFEKRKETL 119

Query: 337 GSMCDERARMLQDQFNVSMNHVQALSILIATFHHSKSPSSIDQTTFARYTDRTTFERPLT 158
            SMCDERARMLQDQFNVSMNHVQA+SILI+TFHH K+PS+IDQ TFARYT+RT FERPLT
Sbjct: 120 ASMCDERARMLQDQFNVSMNHVQAMSILISTFHHGKNPSAIDQRTFARYTERTAFERPLT 179

Query: 157 SGVAYAVKVLHSERDEFQKQQGWTIKRMDKLEQTPVQD----AEVLEPSPVQEEYA 2
           SGVAYAV+V+HSER++F+ QQGWTIKRMD  EQ+PVQ     A+ LEPSP+QEEYA
Sbjct: 180 SGVAYAVRVMHSEREQFENQQGWTIKRMDTFEQSPVQKDDNVAKALEPSPIQEEYA 235


>ref|XP_002297846.1| histidine kinase cytokinin receptor [Populus trichocarpa]
           gi|190148359|gb|ACE63262.1| histidine kinase 3A [Populus
           trichocarpa] gi|222845104|gb|EEE82651.1| histidine
           kinase cytokinin receptor [Populus trichocarpa]
          Length = 1020

 Score =  334 bits (857), Expect = 2e-89
 Identities = 160/236 (67%), Positives = 192/236 (81%), Gaps = 7/236 (2%)
 Frame = -3

Query: 688 MIYIYVFDIGVKVVGHLPLMLCWLILSMISMNWLINGGIME---KIGGDRGKRWLKWVEN 518
           M  ++V+  G++V  HL  MLC  I+S+ISMNW INGG++E    + GD GK WLK +E 
Sbjct: 1   MSLLHVYGFGLRV-RHLLWMLCCWIVSVISMNWFINGGVLETQASLLGDGGKMWLKCLEK 59

Query: 517 VSGIGRKIQHQYYQYIGSKKVGKAWWRKVLVSWILGWVLASMWIFWYLNSQMFEKRKETL 338
           VSG   KI H YYQYIGSK++ K WWRK+LV+WI+GW+  S+WIFWY++SQ FEKRKETL
Sbjct: 60  VSGNSCKIHHHYYQYIGSKRISKTWWRKLLVAWIVGWITVSVWIFWYMSSQAFEKRKETL 119

Query: 337 GSMCDERARMLQDQFNVSMNHVQALSILIATFHHSKSPSSIDQTTFARYTDRTTFERPLT 158
            SMCDERARMLQDQFNVSMNHVQA+SILI+TFHH+K+PS+IDQ TFARYT+RT FERPLT
Sbjct: 120 TSMCDERARMLQDQFNVSMNHVQAMSILISTFHHAKNPSAIDQRTFARYTERTAFERPLT 179

Query: 157 SGVAYAVKVLHSERDEFQKQQGWTIKRMDKLEQTPVQD----AEVLEPSPVQEEYA 2
           SGVAYAV+VLHSER++F+KQQGWTIKRMD  EQ PV       + LEPSP+QEEYA
Sbjct: 180 SGVAYAVRVLHSEREQFEKQQGWTIKRMDSFEQNPVHKDDNAPKALEPSPIQEEYA 235


>gb|ACE63261.1| histidine kinase 3 [Betula pendula]
          Length = 1053

 Score =  321 bits (823), Expect = 2e-85
 Identities = 155/236 (65%), Positives = 185/236 (78%), Gaps = 7/236 (2%)
 Frame = -3

Query: 688 MIYIYVFDIGVKVVGHLPLMLCWLILSMISMNWLINGGIMEKIGG---DRGKRWLKWVEN 518
           M  + V   G+KV GHL  MLC+ I+S+ISMNW IN GIM+   G   D  K WL+  E 
Sbjct: 1   MSLLNVVGFGLKV-GHLLWMLCYWIVSVISMNWFINSGIMDSKTGLLSDSSKMWLRCWEK 59

Query: 517 VSGIGRKIQHQYYQYIGSKKVGKAWWRKVLVSWILGWVLASMWIFWYLNSQMFEKRKETL 338
           +SG   KIQH Y QY GSK+V K WWRK+L++W+ GW + S+WIFWYL+SQ  EKRKE+L
Sbjct: 60  ISGNSCKIQHHYSQYFGSKRVPKEWWRKLLITWVFGWTIVSLWIFWYLSSQATEKRKESL 119

Query: 337 GSMCDERARMLQDQFNVSMNHVQALSILIATFHHSKSPSSIDQTTFARYTDRTTFERPLT 158
            SMCDERARMLQDQFNVSMNH+QA+SI+I+ FHH K+PS+IDQ TFARYT+RT FERPLT
Sbjct: 120 ASMCDERARMLQDQFNVSMNHIQAMSIMISIFHHGKNPSAIDQRTFARYTERTAFERPLT 179

Query: 157 SGVAYAVKVLHSERDEFQKQQGWTIKRMDKLEQTPVQD----AEVLEPSPVQEEYA 2
           SGVAYAV+VLHSER++F+KQQGWTIKRMD LEQ PV +     E LEPSP+QEEYA
Sbjct: 180 SGVAYAVRVLHSEREQFEKQQGWTIKRMDTLEQNPVHEDDYAPEALEPSPIQEEYA 235


>ref|XP_002276961.1| PREDICTED: histidine kinase 3 [Vitis vinifera]
           gi|297738469|emb|CBI27670.3| unnamed protein product
           [Vitis vinifera]
          Length = 1039

 Score =  317 bits (812), Expect = 4e-84
 Identities = 157/236 (66%), Positives = 187/236 (79%), Gaps = 7/236 (2%)
 Frame = -3

Query: 688 MIYIYVFDIGVKVVGHLPLMLCWLILSMISMNWLINGGIMEKIGG---DRGKRWLKWVEN 518
           M +++V   G+KV GHL LMLC  I+S+I +NW INGG+ME   G   D GK W++  E 
Sbjct: 1   MSFLHVLGFGLKV-GHLLLMLCCWIISVIPVNWFINGGVMETKAGLLSDGGKIWMRLWEK 59

Query: 517 VSGIGRKIQHQYYQYIGSKKVGKAWWRKVLVSWILGWVLASMWIFWYLNSQMFEKRKETL 338
           + G   KI H +YQ   SKKVGK WWRK+L +W+L W++ S+WIF YL+ Q  EKRKETL
Sbjct: 60  MFGNSGKIPHHWYQKFWSKKVGKTWWRKLLFTWVLMWIMVSLWIFSYLSLQASEKRKETL 119

Query: 337 GSMCDERARMLQDQFNVSMNHVQALSILIATFHHSKSPSSIDQTTFARYTDRTTFERPLT 158
           GSMCDERARMLQDQFNVSMNHVQA+SILI+TFHH K+PS+IDQ TFARYT+RT FERPLT
Sbjct: 120 GSMCDERARMLQDQFNVSMNHVQAMSILISTFHHGKNPSAIDQGTFARYTERTAFERPLT 179

Query: 157 SGVAYAVKVLHSERDEFQKQQGWTIKRMDKLEQTPVQD----AEVLEPSPVQEEYA 2
           SGVAYAV+VLHSER++F+KQQGWTIKRMD  EQTPV +    +E LEPSPVQEEYA
Sbjct: 180 SGVAYAVRVLHSEREQFEKQQGWTIKRMDTPEQTPVHEDNHASENLEPSPVQEEYA 235


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