BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002832
         (1206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tu...   484   e-134
sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4 gi|...   484   e-134
ref|XP_002276986.1| PREDICTED: 40S ribosomal protein S4-like [Vi...   483   e-134
ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   482   e-134
ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatul...   481   e-133

>gb|ABB72798.1| 40S ribosomal protein S4-like protein [Solanum tuberosum]
          Length = 264

 Score =  484 bits (1246), Expect = e-134
 Identities = 231/264 (87%), Positives = 251/264 (95%)
 Frame = -3

Query: 1123 MARGLKKHLKRINAPKHWMLEKLGGAFAPKPSSGPHKSRESIPLAVVFRNRLKYALTYRE 944
            MARGLKKHLKR+NAPKHWML+KLGGAFAPKPSSGPHKSRE +PL ++ RNRLKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 943  VIAILMQRHVFVDGKVRTNQKYPAGFMDVISIPKTNENFRLLYDTKGRFRLHSVKDEEAK 764
            VI+ILMQR V VDGKVRT++ YPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS++DEE+K
Sbjct: 61   VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 763  FKLCKVRSVQFGQKGIPYLNTSDGRTIRYPDPLIKANDTIKLDLESNKIIDFIKFDVGNV 584
            FKLCKVRSVQFGQKGIPYLNT DGRTIRYPDPLIKANDTIKLDLESNKI+DFIKFDVGNV
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 583  VMVTGGSNRGRVGVIKSREKHKGTFETIHLQDSNGHPFATRLSNVFTIGKGTKPWISLPK 404
            VMVTGG NRGRVGVIK+REKHKG+FET+H+QDS GH FATRL NVFT+GKGTKPW+SLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 403  GKGIKLTIIEEARKRLAAQGAVPA 332
            GKGIKLTIIEEA+KRLAAQ A PA
Sbjct: 241  GKGIKLTIIEEAKKRLAAQSATPA 264


>sp|P46300.1|RS4_SOLTU RecName: Full=40S ribosomal protein S4 gi|457803|emb|CAA54095.1|
            ribosomal protein S4 [Solanum tuberosum]
          Length = 264

 Score =  484 bits (1246), Expect = e-134
 Identities = 231/264 (87%), Positives = 251/264 (95%)
 Frame = -3

Query: 1123 MARGLKKHLKRINAPKHWMLEKLGGAFAPKPSSGPHKSRESIPLAVVFRNRLKYALTYRE 944
            MARGLKKHLKR+NAPKHWML+KLGGAFAPKPSSGPHKSRE +PL ++ RNRLKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYRE 60

Query: 943  VIAILMQRHVFVDGKVRTNQKYPAGFMDVISIPKTNENFRLLYDTKGRFRLHSVKDEEAK 764
            VI+ILMQR V VDGKVRT++ YPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS++DEE+K
Sbjct: 61   VISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESK 120

Query: 763  FKLCKVRSVQFGQKGIPYLNTSDGRTIRYPDPLIKANDTIKLDLESNKIIDFIKFDVGNV 584
            FKLCKVRSVQFGQKGIPYLNT DGRTIRYPDPLIKANDTIKLDLESNKI+DFIKFDVGNV
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNV 180

Query: 583  VMVTGGSNRGRVGVIKSREKHKGTFETIHLQDSNGHPFATRLSNVFTIGKGTKPWISLPK 404
            VMVTGG NRGRVGVIK+REKHKG+FET+H+QDS GH FATRL NVFT+GKGTKPW+SLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPK 240

Query: 403  GKGIKLTIIEEARKRLAAQGAVPA 332
            GKGIKLTIIE+ARKRLAAQ A PA
Sbjct: 241  GKGIKLTIIEDARKRLAAQSATPA 264


>ref|XP_002276986.1| PREDICTED: 40S ribosomal protein S4-like [Vitis vinifera]
          Length = 264

 Score =  483 bits (1243), Expect = e-134
 Identities = 233/264 (88%), Positives = 250/264 (94%)
 Frame = -3

Query: 1123 MARGLKKHLKRINAPKHWMLEKLGGAFAPKPSSGPHKSRESIPLAVVFRNRLKYALTYRE 944
            MARGLKKHLKR+NAPKHWML+KLGGAFAPKPSSGPHKSRE +PL ++ RNRLKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 943  VIAILMQRHVFVDGKVRTNQKYPAGFMDVISIPKTNENFRLLYDTKGRFRLHSVKDEEAK 764
            VIAILMQRH+FVDGKVRT++ YP+GFMDV+SIPKTNENFRLLYDTKGRFRLHSV+DEEAK
Sbjct: 61   VIAILMQRHIFVDGKVRTDKTYPSGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 763  FKLCKVRSVQFGQKGIPYLNTSDGRTIRYPDPLIKANDTIKLDLESNKIIDFIKFDVGNV 584
            FKLCKVRSVQFGQKGIPYLNT DGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 583  VMVTGGSNRGRVGVIKSREKHKGTFETIHLQDSNGHPFATRLSNVFTIGKGTKPWISLPK 404
            VMVTGG NRGRVGVIK+REKHKGTFETIH+QD+ GH FATRL NVF IGKGTKPW+SLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGTFETIHIQDATGHEFATRLGNVFIIGKGTKPWVSLPK 240

Query: 403  GKGIKLTIIEEARKRLAAQGAVPA 332
            GKGIKL+IIEEA+KRLAAQ A  A
Sbjct: 241  GKGIKLSIIEEAKKRLAAQAASSA 264


>ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  482 bits (1241), Expect = e-134
 Identities = 233/264 (88%), Positives = 250/264 (94%)
 Frame = -3

Query: 1123 MARGLKKHLKRINAPKHWMLEKLGGAFAPKPSSGPHKSRESIPLAVVFRNRLKYALTYRE 944
            MARGLKKHLKR+NAPKHWML+KLGGAFAPKPSSGPHKSRE +PL ++ RNRLKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 943  VIAILMQRHVFVDGKVRTNQKYPAGFMDVISIPKTNENFRLLYDTKGRFRLHSVKDEEAK 764
            VIAILMQRHV VD KVRT++ YPAGFMDV+SIPKT+ENFRLLYDTKGRFRLHS++DEEAK
Sbjct: 61   VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSIRDEEAK 120

Query: 763  FKLCKVRSVQFGQKGIPYLNTSDGRTIRYPDPLIKANDTIKLDLESNKIIDFIKFDVGNV 584
            FKLCKVRSVQFGQKGIPYLNT DGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNV
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 583  VMVTGGSNRGRVGVIKSREKHKGTFETIHLQDSNGHPFATRLSNVFTIGKGTKPWISLPK 404
            VMVTGG NRGRVGVIK+REKHKG+FETIH+QD+ GH FATRL NVFTIGKGTKPW+SLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 403  GKGIKLTIIEEARKRLAAQGAVPA 332
            GKGIKLTIIEEARKRLA+Q AV A
Sbjct: 241  GKGIKLTIIEEARKRLASQSAVTA 264


>ref|XP_003604568.1| 40S ribosomal protein S4 [Medicago truncatula]
            gi|355505623|gb|AES86765.1| 40S ribosomal protein S4
            [Medicago truncatula]
          Length = 264

 Score =  481 bits (1239), Expect = e-133
 Identities = 232/264 (87%), Positives = 249/264 (94%)
 Frame = -3

Query: 1123 MARGLKKHLKRINAPKHWMLEKLGGAFAPKPSSGPHKSRESIPLAVVFRNRLKYALTYRE 944
            MARGLKKHLKR+NAPKHWML+KLGGAFAPKPSSGPHKSRE +PL ++ RNRLKYALTYRE
Sbjct: 1    MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 943  VIAILMQRHVFVDGKVRTNQKYPAGFMDVISIPKTNENFRLLYDTKGRFRLHSVKDEEAK 764
            VIAILMQRHV VDGKVRT++ YPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSV+D+EAK
Sbjct: 61   VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 763  FKLCKVRSVQFGQKGIPYLNTSDGRTIRYPDPLIKANDTIKLDLESNKIIDFIKFDVGNV 584
            FKLCKVRSVQFGQKGIPYLNT DGRTIRYPDPLIKANDTIKLDLE+NKI DFIKFDVGNV
Sbjct: 121  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLENNKITDFIKFDVGNV 180

Query: 583  VMVTGGSNRGRVGVIKSREKHKGTFETIHLQDSNGHPFATRLSNVFTIGKGTKPWISLPK 404
            VMVTGG NRGRVGVIK+REKHKGTFETIH+QD++GH FATRL NVFTIGKGTKPW+SLPK
Sbjct: 181  VMVTGGRNRGRVGVIKNREKHKGTFETIHVQDASGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 403  GKGIKLTIIEEARKRLAAQGAVPA 332
            GKGIKLT+IEEARKR AAQ    A
Sbjct: 241  GKGIKLTVIEEARKRQAAQNVTAA 264