BLASTX nr result

ID: Cimicifuga21_contig00002810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002810
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283553.1| PREDICTED: uncharacterized protein LOC100244...   141   4e-31
ref|XP_002526984.1| conserved hypothetical protein [Ricinus comm...   116   1e-23
ref|XP_002314857.1| predicted protein [Populus trichocarpa] gi|2...   105   2e-20
ref|XP_002312403.1| predicted protein [Populus trichocarpa] gi|2...   105   2e-20
ref|XP_002890691.1| hypothetical protein ARALYDRAFT_890166 [Arab...    70   1e-09

>ref|XP_002283553.1| PREDICTED: uncharacterized protein LOC100244058 [Vitis vinifera]
          Length = 317

 Score =  141 bits (355), Expect = 4e-31
 Identities = 107/327 (32%), Positives = 162/327 (49%), Gaps = 14/327 (4%)
 Frame = -1

Query: 1122 MDIPVLGRISGFEAEITLLQNPSFISAIEETIKVQTFWTWGALILALLATFSSVISRFKL 943
            M+IP++ R+S F+    L    S +  I +  +  + W WGALILALLATF+S+I+R K+
Sbjct: 1    MEIPIINRMSNFDDPSVL----SRLFPISQISQPFSLWKWGALILALLATFTSIINRTKI 56

Query: 942  VIFRYCKGKSGISQPLLQQFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTFEKYDEDF 763
            +I R  K  S  +QPL    +                              +  + D++ 
Sbjct: 57   LIIRLRKRSSLAAQPL----HSEPDDGGFSDSEDDTCSSISSDDDDDAEPMSLIEDDKNV 112

Query: 762  RVA-----GQGQKSKFKY-RNSDSSFSWSDFVNGKSVVKSWDGFGLGLEKASESLISLWD 601
            RV       Q  K+K +  R+       S+  NGKS+VK WDG  L L+ +  SL+S++D
Sbjct: 113  RVGYCEDEPQSHKTKLRRCRSIGDRLFLSELTNGKSIVKLWDG--LSLDNSCGSLVSIYD 170

Query: 600  LNKHEISVPFPGGKYQIPALTMPSPSVIMSAGLETSRNAALRVFDTRVGRQIPQIFSEWQ 421
            LNK      F GG ++ P++++ SP+V++S     + N ALRV+DTRVGRQIP IF+EW+
Sbjct: 171  LNKDLNKSSFFGGTHRFPSVSVTSPAVVVSTMTGNAMNTALRVWDTRVGRQIPAIFAEWR 230

Query: 420  -QPCRRKYXXXXXXXXXXXXXXXXXXRKIG------VPIESLTESELKTRWDSGAVIVDG 262
             Q  +R                      +G       P++++TE +  T WD+ AV+V  
Sbjct: 231  PQMGKRVSISTGGIEKVYVRDDVTGELTVGDMRNASSPLQNVTECDGGTWWDADAVMVYK 290

Query: 261  NREICCLGNDCGEVVSRCHE-VLSYLF 184
            +         C  +VSRC + V SYLF
Sbjct: 291  DYVDQWAVKGCESIVSRCCDAVKSYLF 317


>ref|XP_002526984.1| conserved hypothetical protein [Ricinus communis]
            gi|223533619|gb|EEF35356.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 337

 Score =  116 bits (291), Expect = 1e-23
 Identities = 106/332 (31%), Positives = 150/332 (45%), Gaps = 47/332 (14%)
 Frame = -1

Query: 1122 MDIPVLGRISGFEAEITLLQNPSFIS------AIEETIKVQTFWTWGALILALLATFSSV 961
            M+IPV+ RI  FEA    LQNPSF+S       +E+  +   FW WGALILAL+A+FS++
Sbjct: 1    MEIPVINRIGDFEAS---LQNPSFLSQAITLSGVEKIHQAYGFWKWGALILALVASFSTI 57

Query: 960  ISRFKLVIFRYCKGKSGISQP---LLQQFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 790
            I+R K +I R        S P     QQ Y                              
Sbjct: 58   INRIKNLIIRIQNHYLTPSPPPPLTTQQHYDSDTESETSSSSSSDDEQDIEVED------ 111

Query: 789  TFEKYDEDFR--------------VAGQGQ--------KSKFKYRNSDSSFSWSDFVNGK 676
              ++ DED R              V G G         ++  + RNS     +S+F NGK
Sbjct: 112  --DEEDEDERCSWRSNDDDDYYSVVKGSGHYIDDQWQNRNLRRRRNSSLQDLFSEFRNGK 169

Query: 675  SVVKSWD----GFGLGLEKASESLISLWDLNKHEISVPFPGGKYQIPAL--TMPSPSVIM 514
            SVVK WD    GFGL L+  S + +SL D+NK        G +  IPA+  +  SP+VI+
Sbjct: 170  SVVKLWDNLGFGFGLNLDNNSRNCVSLHDINKELSLFSILGERSDIPAVSTSSSSPAVIV 229

Query: 513  SAGLETSRNAALRVFDTRVGRQIPQIFSEWQQPCRRKY----------XXXXXXXXXXXX 364
            S+    + N  L+V+DTRVG +IP+I +EW +P   K+                      
Sbjct: 230  SSEANVAGN-LLKVWDTRVGCRIPEILAEW-RPRLGKFVGISSGGGGVGKVYVRDDVTGR 287

Query: 363  XXXXXXRKIGVPIESLTESELKTRWDSGAVIV 268
                  RK+  P+ + TE+++ T WD+  V V
Sbjct: 288  LTVGDMRKVKSPLVNATETDVDTWWDADGVSV 319


>ref|XP_002314857.1| predicted protein [Populus trichocarpa] gi|222863897|gb|EEF01028.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  105 bits (263), Expect = 2e-20
 Identities = 95/333 (28%), Positives = 141/333 (42%), Gaps = 43/333 (12%)
 Frame = -1

Query: 1122 MDIPVLGRISGFEAEITLLQNPSFISAI------EETIKVQTFWTWGALILALLATFSSV 961
            M+IPV+ RIS FE  I+ LQNPSF+S I      E+  +  +FW WGAL+LAL+A+F+++
Sbjct: 1    MEIPVINRISDFETGISSLQNPSFLSQILALSGAEKIHQAYSFWKWGALLLALVASFTTI 60

Query: 960  ISRFKLVIFRYCKGKSGISQPLL------QQFYXXXXXXXXXXXXXXXXXXXXXXXXXXX 799
            I+R K+++ R+ K    IS P L        +                            
Sbjct: 61   INRIKILVIRF-KNHPFISSPSLITNQEDGDYESETDLSCSSSISLSDEEQEEEPPSTSR 119

Query: 798  XXSTFEKYDEDFRVAGQG--------QKSKFKYRNSDSS-----FSWSDFVNGKSVVKSW 658
               +   +DEDF V G G        Q   F+ R   +S     FS SDF N ++VVK W
Sbjct: 120  SWWSINDHDEDFCVRGSGNRYIDDQWQNGNFRLRRRRNSSIGDFFSLSDFTNERNVVKLW 179

Query: 657  DGFGLGL-------EKASESLISLWDLNKHEISVPFPGGKYQIPALTMPSPSVIMSAGLE 499
            D  GLGL         +  +++S +D+N         G K    + T  SP         
Sbjct: 180  DNLGLGLGFNLNNGGDSRSAVVSFYDINNERNICSIFGSK--CDSFTAVSP--------- 228

Query: 498  TSRNAALRVFDTRVGRQIPQIFSEWQQPCRRKY-----------XXXXXXXXXXXXXXXX 352
                        RVG ++P++F+E  +P   K                            
Sbjct: 229  ------------RVGFRMPEVFAE-LRPMLGKIVGVSGGGGGGAKKVYVRDDVTGELTVG 275

Query: 351  XXRKIGVPIESLTESELKTRWDSGAVIVDGNRE 253
              RK+  P+ ++TES++ T WD+ AVIV+   E
Sbjct: 276  DIRKVSSPLVNVTESDVDTWWDADAVIVEDECE 308


>ref|XP_002312403.1| predicted protein [Populus trichocarpa] gi|222852223|gb|EEE89770.1|
            predicted protein [Populus trichocarpa]
          Length = 279

 Score =  105 bits (262), Expect = 2e-20
 Identities = 90/323 (27%), Positives = 132/323 (40%), Gaps = 33/323 (10%)
 Frame = -1

Query: 1122 MDIPVLGRISGFEAEITLLQNPSFISAI------EETIKVQTFWTWGALILALLATFSSV 961
            M+IPV+ RIS FE  +  LQNP+F+S I      E+  +  +FW WGALILAL A+F+++
Sbjct: 1    MEIPVINRISDFETGLASLQNPTFLSQILALSGVEKIHQAYSFWKWGALILALAASFTAI 60

Query: 960  ISRFKLVIFRYCKGKSGISQPLL------QQFYXXXXXXXXXXXXXXXXXXXXXXXXXXX 799
            I+R K++I R+ K    IS P L        +                            
Sbjct: 61   INRIKILIIRF-KNHPFISSPSLISNQEDCDYESETDLSCSSSISLSDDEQEEESTSSSR 119

Query: 798  XXSTFEKYDEDFRVAGQG--------QKSKFKYRNSDSS-----FSWSDFVNGKSVVKSW 658
               +   +D+DFRV G G        Q   F+ R   +S     FS +DF NGK+VVK W
Sbjct: 120  SWWSINDHDQDFRVRGSGNRYIDDQCQGGNFRLRRRRNSSIGDFFSLTDFTNGKNVVKLW 179

Query: 657  DGFGLGLEKASESLISLWDLNKHEISVPFPGGKYQIPALTMPSPSVIMSAGLETSRNAAL 478
            D  GL    +  S +SLW                                          
Sbjct: 180  DNLGLKTNLSGHSSLSLW------------------------------------------ 197

Query: 477  RVFDTRVGRQIPQIFSEWQQPCRRKYXXXXXXXXXXXXXXXXXXRKIGV--------PIE 322
               DTRVG ++P++F+E  +P   K                    ++ V        P+ 
Sbjct: 198  ---DTRVGFRVPEVFAE-LRPTLGKIVGVVVGGVEKVYVRDDVTGELTVGDMRKPSSPLV 253

Query: 321  SLTESELKTRWDSGAVIVDGNRE 253
            ++TES++ T W++ AVIV+   E
Sbjct: 254  NVTESDVDTWWETDAVIVENECE 276


>ref|XP_002890691.1| hypothetical protein ARALYDRAFT_890166 [Arabidopsis lyrata subsp.
            lyrata] gi|297336533|gb|EFH66950.1| hypothetical protein
            ARALYDRAFT_890166 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 16/254 (6%)
 Frame = -1

Query: 1122 MDIPVLGRISGFEAEITLLQNPSF------ISAIEETIKVQTFWTWGA-LILALLATFSS 964
            M++P++ RIS F+  I  + +PS+      +S + +  +  +FW WGA L+LA  A+F+S
Sbjct: 1    MEVPIINRISDFDVGINSINDPSYLSRALAVSGVGKLHQAYSFWKWGALLLLAFFASFTS 60

Query: 963  VISRFKLVIFRYCKGKSGISQPLLQQFYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTF 784
            + +R K ++FR       +  P L   Y                                
Sbjct: 61   LTTRIKALVFRLRNVNVSLPSPTLLCNYDSDSDWSFASDSSDEDD--------------- 105

Query: 783  EKYDEDFRVAGQGQKSKFKYRNSDSSFSWSDFVNGKS--VVKSWDGFGLGLEKASESLIS 610
            +   ED  V G  +  +F Y + D   +    +NG    + +    FG  L+  S  ++ 
Sbjct: 106  DDDKEDESVNGDLRVKRFSYFHDDDDKA----INGNVPWLRRCSGSFGDLLDLGSSGVVK 161

Query: 609  LWDL-------NKHEISVPFPGGKYQIPALTMPSPSVIMSAGLETSRNAALRVFDTRVGR 451
            LWD        + H     F     +  + ++ S +V+++A  + S    +  +D RVG 
Sbjct: 162  LWDNLDFNGEGSHHNAVASFLS---KCGSYSLLSSTVLLAAEKKGSDGLEVSAWDARVGF 218

Query: 450  QIPQIFSEWQQPCR 409
             +P + +EW+QP R
Sbjct: 219  GVPALLAEWKQPGR 232


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