BLASTX nr result

ID: Cimicifuga21_contig00002805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00002805
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16239.3| unnamed protein product [Vitis vinifera]              199   1e-48
ref|XP_002530246.1| conserved hypothetical protein [Ricinus comm...   199   1e-48
ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog ...   197   5e-48
ref|XP_004170620.1| PREDICTED: DNA repair protein RAD51 homolog ...   192   1e-46
ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog ...   192   1e-46

>emb|CBI16239.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  199 bits (506), Expect = 1e-48
 Identities = 100/151 (66%), Positives = 124/151 (82%), Gaps = 1/151 (0%)
 Frame = -3

Query: 1238 EQERDAPRQHSLGWHISFLKSLAEFSRIPIVVTNQVRSQS-SADALYSFQVQNKHEIVLD 1062
            E ++   RQHSLGWHISF+KS+AEFSRIPIVVTNQVRSQS    + YSFQV+++ E V D
Sbjct: 220  EYDQGPTRQHSLGWHISFVKSVAEFSRIPIVVTNQVRSQSHDGTSQYSFQVESRGETVDD 279

Query: 1061 PERLELHLVAALGIHWAHAVTIRLVLEACSGQRFIKLAKSPLSPPLAFPFVVTSSGISLL 882
              R + HLVAALGIHWAHAVTIRLVLEA +GQRF+K+AKSP+SPPLAFPF +T SGISLL
Sbjct: 280  HTRFDSHLVAALGIHWAHAVTIRLVLEAKAGQRFLKVAKSPISPPLAFPFNITPSGISLL 339

Query: 881  SDDGTEVEGAEINKIHCQGYNDMTDFSREQL 789
            +D+G E++G +I+ IH QG+ D+ +F  E+L
Sbjct: 340  NDEGIEMKGPQISTIHYQGHEDIINFDSERL 370


>ref|XP_002530246.1| conserved hypothetical protein [Ricinus communis]
            gi|223530250|gb|EEF32152.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 238

 Score =  199 bits (506), Expect = 1e-48
 Identities = 96/139 (69%), Positives = 116/139 (83%), Gaps = 1/139 (0%)
 Frame = -3

Query: 1238 EQERDAPRQHSLGWHISFLKSLAEFSRIPIVVTNQVRSQSSADAL-YSFQVQNKHEIVLD 1062
            E ++ APRQHSLGWHISF+KSLAEFSRIP++VTNQVRSQS  +   YSFQVQ   E   +
Sbjct: 92   ENDQGAPRQHSLGWHISFIKSLAEFSRIPVLVTNQVRSQSYNEVCQYSFQVQRNDETQEE 151

Query: 1061 PERLELHLVAALGIHWAHAVTIRLVLEACSGQRFIKLAKSPLSPPLAFPFVVTSSGISLL 882
            PE+ + HL+AALGIHWAHAVT+RLVLEA  GQR+IK+AKSP+SPP++FPF +T+SGI+LL
Sbjct: 152  PEKYDSHLIAALGIHWAHAVTVRLVLEAKLGQRYIKVAKSPISPPMSFPFNITASGIALL 211

Query: 881  SDDGTEVEGAEINKIHCQG 825
             DDGTE+ G EIN I CQG
Sbjct: 212  DDDGTELRGKEINSIQCQG 230


>ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Vitis vinifera]
          Length = 439

 Score =  197 bits (501), Expect = 5e-48
 Identities = 99/149 (66%), Positives = 122/149 (81%), Gaps = 1/149 (0%)
 Frame = -3

Query: 1238 EQERDAPRQHSLGWHISFLKSLAEFSRIPIVVTNQVRSQS-SADALYSFQVQNKHEIVLD 1062
            E ++   RQHSLGWHISF+KS+AEFSRIPIVVTNQVRSQS    + YSFQV+++ E V D
Sbjct: 220  EYDQGPTRQHSLGWHISFVKSVAEFSRIPIVVTNQVRSQSHDGTSQYSFQVESRGETVDD 279

Query: 1061 PERLELHLVAALGIHWAHAVTIRLVLEACSGQRFIKLAKSPLSPPLAFPFVVTSSGISLL 882
              R + HLVAALGIHWAHAVTIRLVLEA +GQRF+K+AKSP+SPPLAFPF +T SGISLL
Sbjct: 280  HTRFDSHLVAALGIHWAHAVTIRLVLEAKAGQRFLKVAKSPISPPLAFPFNITPSGISLL 339

Query: 881  SDDGTEVEGAEINKIHCQGYNDMTDFSRE 795
            +D+G E++G +I+ IH QG+ D+ +F  E
Sbjct: 340  NDEGIEMKGPQISTIHYQGHEDIINFDSE 368


>ref|XP_004170620.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis sativus]
          Length = 379

 Score =  192 bits (488), Expect = 1e-46
 Identities = 95/143 (66%), Positives = 118/143 (82%), Gaps = 1/143 (0%)
 Frame = -3

Query: 1238 EQERDAPRQHSLGWHISFLKSLAEFSRIPIVVTNQVRSQSSADAL-YSFQVQNKHEIVLD 1062
            E E  AP+QHSLGWHISF+KS+AEF+RIP+VVTNQVRS++  +   YSFQ  ++ E    
Sbjct: 228  EYELGAPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRKEVSHYSFQGWSRSECQEY 287

Query: 1061 PERLELHLVAALGIHWAHAVTIRLVLEACSGQRFIKLAKSPLSPPLAFPFVVTSSGISLL 882
                  H+VAALG+HWAH+VTIRLVLEA SGQRFIKLAKSP+SPPLAFPF +T+SGISLL
Sbjct: 288  SSGYGSHIVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISLL 347

Query: 881  SDDGTEVEGAEINKIHCQGYNDM 813
            S++G E+ GAEIN+IHCQG++D+
Sbjct: 348  SNNGEELSGAEINEIHCQGHSDI 370


>ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis sativus]
          Length = 371

 Score =  192 bits (488), Expect = 1e-46
 Identities = 95/143 (66%), Positives = 118/143 (82%), Gaps = 1/143 (0%)
 Frame = -3

Query: 1238 EQERDAPRQHSLGWHISFLKSLAEFSRIPIVVTNQVRSQSSADAL-YSFQVQNKHEIVLD 1062
            E E  AP+QHSLGWHISF+KS+AEF+RIP+VVTNQVRS++  +   YSFQ  ++ E    
Sbjct: 220  EYELGAPKQHSLGWHISFIKSIAEFARIPVVVTNQVRSRNRKEVSHYSFQGWSRSECQEY 279

Query: 1061 PERLELHLVAALGIHWAHAVTIRLVLEACSGQRFIKLAKSPLSPPLAFPFVVTSSGISLL 882
                  H+VAALG+HWAH+VTIRLVLEA SGQRFIKLAKSP+SPPLAFPF +T+SGISLL
Sbjct: 280  SSGYGSHIVAALGVHWAHSVTIRLVLEAKSGQRFIKLAKSPMSPPLAFPFTITASGISLL 339

Query: 881  SDDGTEVEGAEINKIHCQGYNDM 813
            S++G E+ GAEIN+IHCQG++D+
Sbjct: 340  SNNGEELSGAEINEIHCQGHSDI 362


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